LOCUS       NM_001108653            4139 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus BICD cargo adaptor 1 (Bicd1), mRNA.
ACCESSION   NM_001108653 XM_001076085 XM_342789
VERSION     NM_001108653.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4139)
  AUTHORS   Swift,S., Xu,J., Trivedi,V., Austin,K.M., Tressel,S.L., Zhang,L.,
            Covic,L. and Kuliopulos,A.
  TITLE     A novel protease-activated receptor-1 interactor, Bicaudal D1,
            regulates G protein signaling and internalization
  JOURNAL   J Biol Chem 285 (15), 11402-11410 (2010)
   PUBMED   20164183
  REMARK    GeneRIF: protease-activated receptor-1 interactor, Bicaudal D1,
            regulates G protein signaling and internalization
REFERENCE   2  (bases 1 to 4139)
  AUTHORS   Indran,S.V., Ballestas,M.E. and Britt,W.J.
  TITLE     Bicaudal D1-dependent trafficking of human cytomegalovirus tegument
            protein pp150 in virus-infected cells
  JOURNAL   J Virol 84 (7), 3162-3177 (2010)
   PUBMED   20089649
REFERENCE   3  (bases 1 to 4139)
  AUTHORS   Loschi,M., Leishman,C.C., Berardone,N. and Boccaccio,G.L.
  TITLE     Dynein and kinesin regulate stress-granule and P-body dynamics
  JOURNAL   J Cell Sci 122 (Pt 21), 3973-3982 (2009)
   PUBMED   19825938
REFERENCE   4  (bases 1 to 4139)
  AUTHORS   Fuchs,E., Haas,A.K., Spooner,R.A., Yoshimura,S., Lord,J.M. and
            Barr,F.A.
  TITLE     Specific Rab GTPase-activating proteins define the Shiga toxin and
            epidermal growth factor uptake pathways
  JOURNAL   J Cell Biol 177 (6), 1133-1143 (2007)
   PUBMED   17562788
REFERENCE   5  (bases 1 to 4139)
  AUTHORS   Fumoto,K., Hoogenraad,C.C. and Kikuchi,A.
  TITLE     GSK-3beta-regulated interaction of BICD with dynein is involved in
            microtubule anchorage at centrosome
  JOURNAL   EMBO J 25 (24), 5670-5682 (2006)
   PUBMED   17139249
REFERENCE   6  (bases 1 to 4139)
  AUTHORS   Matanis,T., Akhmanova,A., Wulf,P., Del Nery,E., Weide,T.,
            Stepanova,T., Galjart,N., Grosveld,F., Goud,B., De Zeeuw,C.I.,
            Barnekow,A. and Hoogenraad,C.C.
  TITLE     Bicaudal-D regulates COPI-independent Golgi-ER transport by
            recruiting the dynein-dynactin motor complex
  JOURNAL   Nat Cell Biol 4 (12), 986-992 (2002)
   PUBMED   12447383
  REMARK    Erratum:[Nat Cell Biol. 2003 Jan;5(1):84.]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473964.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_342789.3, XM_001076085.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132291,
                              SAMD00132292 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..4139
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q44"
     gene            1..4139
                     /gene="Bicd1"
                     /note="BICD cargo adaptor 1"
                     /db_xref="GeneID:362466"
                     /db_xref="RGD:1309444"
     exon            1..640
                     /gene="Bicd1"
                     /inference="alignment:Splign:2.1.0"
     CDS             428..2935
                     /gene="Bicd1"
                     /note="bicaudal D homolog 1"
                     /codon_start=1
                     /product="protein bicaudal D homolog 1"
                     /protein_id="NP_001102123.1"
                     /db_xref="GeneID:362466"
                     /db_xref="RGD:1309444"
                     /translation="MAAEEALKTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEE
                     KLTLKQQYDELEAEYDGLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKE
                     AYYLNKILEMQNELKQSRAVVTNVQAENERLSAVVQELKENNEMVELQRIRMKDEIRE
                     YKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLE
                     DAIRLKEIAEHQLEEALETLKNEREQKNNLRKELSQYISLSDNHISISVEGLKFAEDG
                     SEPNNDDKMNGHLHGPLGKLNGDYRAPTARKGESLHPVSDLFSELNISEIQKLKQQLI
                     QVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMRGLQNSKELKAELD
                     CEKGRNSAEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTE
                     EKTKYESKIQMYDEQVTNLEKTSKESGEKMAHMEKELQKMTGIANENHNTLNTAQDEL
                     VTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLSRR
                     GVSSPVESRTSSEPVSKENTETSKEPSPTKTPTISPVITAPPSSPVLDTSDIRKEPMN
                     IYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLS
                     TKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAAT
                     FSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLE
                     FDHEQSRRSKGKLGKSKIGSPKIVSSLLPPYRHSAHN"
     exon            641..853
                     /gene="Bicd1"
                     /inference="alignment:Splign:2.1.0"
     exon            854..1006
                     /gene="Bicd1"
                     /inference="alignment:Splign:2.1.0"
     exon            1007..1432
                     /gene="Bicd1"
                     /inference="alignment:Splign:2.1.0"
     exon            1433..2527
                     /gene="Bicd1"
                     /inference="alignment:Splign:2.1.0"
     exon            2528..2679
                     /gene="Bicd1"
                     /inference="alignment:Splign:2.1.0"
     exon            2680..2887
                     /gene="Bicd1"
                     /inference="alignment:Splign:2.1.0"
     exon            2888..2963
                     /gene="Bicd1"
                     /inference="alignment:Splign:2.1.0"
     exon            2964..4139
                     /gene="Bicd1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgtaagcact ggctgccgca gggcccagca agcaggtgga gctcagcctc ccacggagca
       61 ttgggcggtg gaccgcagtg acgcggcctg agacatggcg gccacgcgcc tctgaggccg
      121 cagagccgga gcctcttgct gtgcgagctg cgtctgacca tgcagcttgg ctgctgactg
      181 ctcgggcgcg tggcccgcag gatcccggct gcggtcatca ccttgcagtc tccatgctgc
      241 agggtgtatt cctcccatat tccatgtatt cctccttagt gcttccggcc gtgtagcagc
      301 cgctgccggc cgggcctcaa ggcgctctgc ctattcatca ggcacttttc ctttccattt
      361 ttttatttcc attcctattt gcttcttctt tttccttctg ctttgcgtct atcttcgcca
      421 ccccgctatg gccgcagaag aggcgctgaa gacggtagac cactataaga ctgagataga
      481 gagactgacc aaggagctca cagaaacgac ccacgagaag attcaggctg cggagtatgg
      541 gctggtggtg ctggaggaga aactgactct caagcaacag tatgacgagc tggaggccga
      601 gtatgacggc ctcaaacaag agctggagca gctcaaagag gcatttgggc agtccttctc
      661 tatccaccgt aaagtggctg aggatggaga gactcgggag gaaacacttc ttcaggagtc
      721 tgcatccaag gaagcttact atctaaacaa gatcttggag atgcagaatg agctgaagca
      781 gagccgggct gtagttacaa atgtccaggc agaaaacgag agactctcgg ctgttgtaca
      841 ggaactgaag gagaacaacg agatggtgga gctacagagg atacgaatga aagatgaaat
      901 ccgagaatat aaattccggg aagcccgact ccttcaggac tacacggaat tggaagaaga
      961 aaacattaca ttgcagaagc tagtgtccac attaaagcag aaccaggttg aatatgaagg
     1021 cttaaagcat gaaattaagc ggtttgaaga agaaacagta ttactgaaca gccaactaga
     1081 agatgccatt cgactgaagg aaattgcaga gcaccagttg gaagaagccc tcgaaacact
     1141 gaagaatgaa agggagcaaa aaaacaacct gaggaaggag ctgtcccagt acatcagcct
     1201 cagtgacaac cacatcagca tctcagtcga ggggctcaag tttgccgagg acgggagtga
     1261 gccaaacaac gatgacaaga tgaacgggca tctccacggg cctctgggga agctgaatgg
     1321 agactatcgt gcgcccactg ccaggaaagg agagtcccta caccctgtgt ctgacttatt
     1381 cagtgagttg aacatttcag aaattcaaaa actgaagcag cagcttattc aggtagagcg
     1441 ggaaaaagcg attcttctgg ccaacctcca ggagtcacaa acccagctag aacacaccaa
     1501 gggggcactg acagagcagc atgaacgagt tcaccggctc acagaacatg tcaatgctat
     1561 gaggggtttg caaaacagta aagagctcaa ggctgagcta gattgtgaga agggccggaa
     1621 ctcagcggag gaagcccacg actatgaggt agacatcaat ggcttagaga tccttgagtg
     1681 taaatataga gtggctgtca cggaagtcat tgatttgaaa gcagaaatta aggccttaaa
     1741 ggaaaaatat aacaaatctg tagaaaatta tacagaagaa aagaccaaat atgagagtaa
     1801 gatccaaatg tatgatgagc aagtgacaaa ccttgagaag acatctaagg agagtggtga
     1861 gaagatggcc cacatggaga aggagttgca aaagatgact ggcatagcca acgaaaacca
     1921 caacaccctc aatacagctc aggatgagtt ggtgacattt agtgaggaac tagcccagct
     1981 ttaccaccat gtgtgtctat gtaataatga aactcccaat agagtcatgt tggactacta
     2041 tagacaaagc agagttactc gaagtggcag cctcaagggg cctgatgatc ccagagggct
     2101 tttgtcacca agattatcca ggaggggtgt ttcatcccct gtagaatcaa ggacatcatc
     2161 cgagccggtt tcaaaggaaa acacagagac tagtaaagag ccaagtccaa ctaagactcc
     2221 cacaatctct cctgttatta ctgccccacc atcatctcca gttttggata caagtgatat
     2281 ccgcaaagag ccaatgaata tctacaacct caatgccata attcgggacc aaatcaagca
     2341 tctgcagaaa gcagtggaca ggtccttaca gctgtctcgt caaagagcag cagcccgaga
     2401 gttggccccc atgatcgata aggacaagga agccttaatg gaggagattc tcaagctgaa
     2461 gtccttgctg agcaccaaac gggagcaaat tgccacactg agggcagtgt tgaaagccaa
     2521 taagcagaca gccgaagtgg ctttagctaa cctgaagaac aaatatgaaa atgaaaaagc
     2581 aatggttact gaaacaatga caaaactgag gaacgagcta aaggctttga aagaagatgc
     2641 tgcaaccttc tcatccctga gagcaatgtt tgcaacaaga tgtgatgaat atgtcacaca
     2701 gttggatgag atgcagagac agttagcagc tgcagaagac gagaagaaga ctctaaacac
     2761 tttattacga atggctatcc agcaaaagct tgccctgaca cagaggctgg aggacttaga
     2821 gtttgaccat gagcagtccc gacgcagcaa aggcaaactt ggaaagagca agatcggcag
     2881 ccctaaaatt gtcagcagcc tgctgcctcc gtaccgccac agtgctcaca actagctggg
     2941 aggcaagact acccaactgt cagtccggac attgccctca gtaaggagca gccacattcc
     3001 agctcacagt gtgcacctct ccattgtctc gccaagcctc cttaccccta gtcttcatct
     3061 ctcacggatg aatatctggg ctgaaggcca cagtgagggc gctaagatct agcaggtgtt
     3121 ttcttcttgg atgttagatg tacatgtgga ttccagtcca tcatttttga agagaaaaga
     3181 gagttcagaa gaataaaatg atacataaac cctcgtgtga tcaatcatgg ttaccctgaa
     3241 tcacagatga cctgcaatca aatggcaaca gttcacttga aactgaaatg agacatgtat
     3301 ttcagatagc tggcttcacc tccattgcat aaaatagatc caagacatgt aaaatagata
     3361 tgctgtaaat catctttccc tattctccaa agtcagctat agatgttgat tctaatattt
     3421 ttcattgata cttattttat attttatttg ctgtatggtt tatgtttata aagataattt
     3481 ccgtaagcag aatttattta tttttaaaga gtcatagttt attcagttat ttaaagtttt
     3541 aatttagttt aaaatctgaa actggccaga ttttggtcct ttttcttgca gaaaattaca
     3601 aatgaggtgc atcagaatgt taacaacaac tattttgctg ctacatgaat attctttatg
     3661 cagttttttt ctaatcagta actcattgtc agtaattttt tttaactaga gttcttcact
     3721 aaacatttat taagtaaatc taagaaagag gcaaagctat gattcattga cttaatcaag
     3781 gttcgagggt atctttaatt ttttaaaatt gcagttgagt agatagatat attggtgctg
     3841 ctcctgtgcg tgcatgcgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     3901 ttcgtattaa agaaggtcaa attacttgaa ggaaagaaat ggtgtgctta tttaatgacc
     3961 acaaattttt taaacttttc caaatttagg gtcttactat gggtttccca ctaaaaggga
     4021 tcacaataaa tgcaaaaata tatacatata aaactgtacg gtagccttgg ctagctaatt
     4081 tatgcagaaa gtgtatgttt tgttgtttgt tttctttttc cacaatgaat cttccttgc
//
