LOCUS       NM_001398811            1122 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus basic helix-loop-helix family, member a9
            (Bhlha9), mRNA.
ACCESSION   NM_001398811 XM_039087835
VERSION     NM_001398811.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Malik,S., Percin,F.E., Bornholdt,D., Albrecht,B., Percesepe,A.,
            Koch,M.C., Landi,A., Fritz,B., Khan,R., Mumtaz,S., Akarsu,N.A. and
            Grzeschik,K.H.
  TITLE     Mutations affecting the BHLHA9 DNA-binding domain cause MSSD,
            mesoaxial synostotic syndactyly with phalangeal reduction,
            Malik-Percin type
  JOURNAL   Am J Hum Genet 95 (6), 649-659 (2014)
   PUBMED   25466284
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Dec 23, 2021 this sequence version replaced XM_039087835.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360194.950333.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1122              JAXUCZ010000010.1  62011787-62012908
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..1122
                     /gene="Bhlha9"
                     /gene_synonym="RGD1311234"
                     /note="basic helix-loop-helix family, member a9"
                     /db_xref="GeneID:363656"
                     /db_xref="RGD:1311234"
     exon            1..1122
                     /gene="Bhlha9"
                     /gene_synonym="RGD1311234"
                     /inference="alignment:Splign:2.1.0"
     CDS             1..693
                     /gene="Bhlha9"
                     /gene_synonym="RGD1311234"
                     /codon_start=1
                     /product="class A basic helix-loop-helix protein 9"
                     /protein_id="NP_001385740.1"
                     /db_xref="GeneID:363656"
                     /db_xref="RGD:1311234"
                     /translation="MLRGTPGLGLRGLKRGEDSVGDLGHSCPEAGRNFGVLRRSLAEE
                     EEVAGRKRERPARSKARRMAANVRERKRILDYNEAFNALRRALQHDLGGKRLSKIATL
                     RRAIHRITALSLVLRASPAPRWPCGHLECHGQAAHGSSAGDSGFSVPRSVLSPAAPSL
                     ARRDTASPLVPPAPRCASCSPNAHLGRPRMMAEVPSLAQASGGSWRRCPGAAPVGSIQ
                     WRWGSGLGYQHS"
ORIGIN      
        1 atgctccgag gcacgccagg actaggcctg aggggtctga aacggggtga ggattctgtg
       61 ggggacttgg ggcactcctg tccggaggct ggcaggaatt ttggagtgct gaggcgtagt
      121 ctagccgagg aagaagaggt agctggcaga aagcgtgagc ggcccgcacg gtccaaggct
      181 cggcgcatgg cggccaacgt gcgggagcgc aagcgcatcc tggattacaa cgaagcgttt
      241 aatgctctgc gccgggcgct gcagcacgac ctgggcggca agaggctctc caagatcgcc
      301 acgctgcgca gagccatcca ccgcatcacc gcgctctccc tggtcctgcg cgccagtccg
      361 gcgccccgct ggccctgcgg ccatctggag tgtcatggcc aggcagccca cggctcgagc
      421 gccggggact ccggcttcag tgttccgagg tctgtgctgt ctcctgcagc gcctagttta
      481 gcgcgcaggg acaccgccag ccccttagtg ccgccggcac cgcgctgcgc ttcgtgctcc
      541 ccgaacgcac acttggggcg gcccaggatg atggccgaag tgcccagttt ggcccaagcc
      601 tctgggggaa gctggcgtcg atgtcctggg gctgcccctg ttggatcgat tcagtggcgg
      661 tggggctctg ggctgggcta ccaacactcc tgaccgcgcc acccatgggg aagaggggtt
      721 ggccggatga ctacaaaaga gaagattgca aaagtcattc tggatagaac aaaattgaat
      781 ggggttgtga cttgcgtggc agaggaagct gtcttacctc gggaaggaac tccaggtccc
      841 agggcagctt ccacataccc cagtctgggg tggtgaaaaa ggagggagat tttcagtctg
      901 gacttggtcg acctccagtt cctggaaagt ggcctttgct ttcctgtgct tctgaacgct
      961 cttttccctt gctgcttttg gaaagtggga cttgtgagat tgggtgggta gacagctgct
     1021 atgatctgag gcccatgcgg tggccctctt cccctgtttg ggctgctgct gaactgagag
     1081 aggcctggaa aatgaccaaa taaaaatgtc ttctccgtct gt
//
