LOCUS       XM_039086234            2435 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus bifunctional apoptosis regulator
            (Bfar), transcript variant X1, mRNA.
ACCESSION   XM_039086234
VERSION     XM_039086234.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039086234.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2435
                     /gene="Bfar"
                     /gene_synonym="RGD1305537"
                     /note="bifunctional apoptosis regulator; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 41 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     76 samples with support for all annotated introns"
                     /db_xref="GeneID:304709"
                     /db_xref="RGD:1304791"
     CDS             212..1189
                     /gene="Bfar"
                     /gene_synonym="RGD1305537"
                     /codon_start=1
                     /product="bifunctional apoptosis regulator isoform X1"
                     /protein_id="XP_038942162.1"
                     /db_xref="GeneID:304709"
                     /db_xref="RGD:1304791"
                     /translation="MEEPQKNDLSMRGQEEDHPVRSSGPQISVSEFSCHCCYDTLVNP
                     TTLNCGHSFCRHCLALWWMSSKKTECPECREKWEGFPKVNILLRLLLTLTEEEFSRAP
                     YTIENSSHRRVILMELERVRALGVKPPQNLWEYKAVNPGRSLFLLYALKSSPRLGLLY
                     LYLFDYTDSFLPFIHTICPLQEDSFGEDIFTKLLDLREPTWKQWREFLIKYSFLPYQL
                     IAEFAWDWLEVHYWTSRFLIVNAMLLSVLELFSFWRIWSRSELKTVPQRMWSHFWKVS
                     TQGLFMAMFWPLIPQFVCNCLFYWALYFNPIINIDLVVKEIRRLETQVF"
ORIGIN      
        1 ctctatggtt gcaggagctg gtcagagtcg gtccgcagtc ctacgttatt tccggaaacg
       61 aagcctgccg cttgtcctct acttccgcgg ggtcctggcg ggtggcagtg acggagtggg
      121 tcccaggact agtggcgaga ctacgatgca ctatagcagt atcccgagtt tgaaagtgtc
      181 tatatgtatg gatccctgaa tttgctgaga gatggaggag cctcagaaaa atgacctgag
      241 catgagaggg caggaagaag atcatcctgt cagaagcagt ggccctcaga tttctgtgag
      301 tgagttctcc tgccactgct gttacgacac cctggttaac cccaccacct tgaactgtgg
      361 ccacagcttc tgccggcact gcttagcatt atggtggatg tcttcaaaga aaacagagtg
      421 tccagaatgc agagaaaaat gggaaggttt tcccaaagtc aacattctcc tcaggttact
      481 tttaactttg acagaagaag aattttccag ggcaccttac accatagaaa acagtagcca
      541 cagaagagtc atcctcatgg agctggagcg cgtgagagcc ctgggtgtga agccaccaca
      601 gaatctctgg gaatacaagg ctgtcaaccc aggcaggtcc ctgttcttgc tctacgccct
      661 caagagctca ccaagacttg gcttgctata cctgtacttg tttgactaca cagactcctt
      721 tctacccttc atccacacca tctgcccttt gcaggaagac agctttggcg aggacatctt
      781 caccaagctt ctggacctga gggagcccac gtggaagcag tggagagaat tccttatcaa
      841 gtactccttt ctcccgtatc agctgattgc agagtttgcc tgggactggc tggaggtcca
      901 ctactggaca tcgcgcttcc tcatcgtcaa tgccatgctg ctgtctgttc tggagttgtt
      961 ctctttttgg aggatctggt caagaagcga actgaagaca gtgccccaga ggatgtggag
     1021 ccacttttgg aaagtatcga cgcaggggct tttcatggcc atgttctggc cgctcattcc
     1081 tcagtttgtc tgcaactgtt tattttactg ggctctgtac ttcaacccaa ttattaacat
     1141 tgatctggtg gtcaaggaaa tccgacggct ggaaacccaa gtgttctgat cagcagcaag
     1201 gccctgagag agcccgcaaa tctacctgac atccaagttg tgacattcaa agagacaagg
     1261 gacttatttc tacccctggt aaagcaaggt gctgcttctg tgtgtcaagg cttcaaccag
     1321 gtcccttgtc ctttgactct ggcaccatgc taggtaactg ctatccaggt gaggcaagac
     1381 tctgtggtca acacccagcc agtcttctta cagggcttga gaggctcagg ctattttggc
     1441 caacagaagt gggagtcttg gacatgattt ggggtggcat gctgtcaaaa ggctaataca
     1501 ggctgtgtgt gatagtacac accttgaatc tgaccacttg gaaaacagag acaggtggat
     1561 tttttttagt tcaagaccag actggtctac agagtgagtt ccaagacagc tgggctacac
     1621 agagaaaccc tgtctccaaa acaatcaaat caaaacaaaa ggaagaaaag ataaaaggaa
     1681 ggttatgatg gtcagtggcc ttaacctcac tgactgacag gctcccagac caggcttact
     1741 gggccagttc tgtcacgtga gtcacattta ggaaaacaag ggtaggtttt tgtcataagc
     1801 atagataatt gcacatagaa aataaagaga aagagaaaac ttgaggctga gagacagtga
     1861 tggctagctg tgttgtttcc tgttgtgatc attggaaact gagttctcct ttctgtgagc
     1921 agggtgtcca atggaatgcc cgtgaggctg tcttcttagg tgactgagag cactacttgg
     1981 tgttttgttt aaatgtggaa tagactgttc aaggaagcat tttgtaaggt accctcatac
     2041 tgtataatgg ataatcttta ttgtcctgtt ctttagtata aaagcatgta taactatgcc
     2101 aagtgctacc atcatgaata tggagtaagc tggtgtgtgc tggtgtagat gtagtatata
     2161 gcagatgtag agtgcgagct catcagcctt ggcctaccta aaacagcatc caaagtgtga
     2221 gagtgtgggg ggaggtaagt atataggtgt gtgagggggg tggtgagtgt ataggtgtgt
     2281 gagagagaaa gagacagaga cagaaagaga gagacagaga cttagtaatt cattaaccct
     2341 ttgtatctca gagtgaagat ttcacttaaa ctttgcattg aaagtttgaa aaattacttg
     2401 aaataaataa attaaagatt tttatataaa tacaa
//
