LOCUS       XM_039096481            3876 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus BEN domain containing 7 (Bend7),
            transcript variant X1, mRNA.
ACCESSION   XM_039096481
VERSION     XM_039096481.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096481.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3876
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3876
                     /gene="Bend7"
                     /note="BEN domain containing 7; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 75 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:361275"
                     /db_xref="RGD:1305898"
     CDS             459..1763
                     /gene="Bend7"
                     /codon_start=1
                     /product="BEN domain-containing protein 7 isoform X1"
                     /protein_id="XP_038952409.1"
                     /db_xref="GeneID:361275"
                     /db_xref="RGD:1305898"
                     /translation="MEFSERKRSRKSQSFKLVSRDYHHEVYKISEFSNDVNGETKETQ
                     PMFLGDGSMEIKKQITGMRRLLNDRTGRIYQRVGKEGEKLKEEPQDVDLVWPQRLNSS
                     TEAPQGLHPPSRGAWNELPAQSGQFSGQPGPRSRTFQSQPHISASSNGELPGVNSTAG
                     SNCCTCNCQSTLQAILQELKTMRKLMHFQAVGTQNRQQPPISLVCSQRTAISRKRNKK
                     KKVLPKAVEPMTTVKPKPSPSETEKKPAAVAARPPGLQAAECASAEENHILGFGIVLK
                     SPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNG
                     KRKRGLNDNRKGLDQNIVGAIKVFTENYCTANHVDKLPGPRDWVQILQDQIKLARRRL
                     KRGSAEVADGDERLDGISLPPTGHAFVSRRETPEDPEPGSIA"
ORIGIN      
        1 ccgccggcgc ggcccctcct cccgcggggg cggtcagcgc cccggccgcc gctccgcacc
       61 cgccgccgcc gccctccctc ggctcgccgc gtctcccggg ccgcgtccgc aggctgagcc
      121 caggcgggcc gcggcgagca ccccgcagct ccgcgccccc acccggcccg gctcccagcg
      181 gaaagttggg ctgcggcggg ctgcgttcgg gaaaaagcga ggcgacatga gggggcaccg
      241 aggggtcgcc taagacaccg ggaaggcggc gccgcgcgcg gggacaactt cgccccgggc
      301 gcgcagcccc cggccgggct cgcggtggtt cctcccgtcc ctcggcctcc cctgccgatc
      361 gcgacgcgga ccttggtcct ggcggctccg cggcggtgac acgagcccgc ctcagcggcc
      421 gcctcagtct cctgccgtgc cgccaccttg cccgcaccat ggagttctcg gagaggaaaa
      481 gaagcaggaa atcccagagc ttcaaactgg tgagccgaga ttatcaccat gaggtgtata
      541 aaatctcaga attcagcaac gatgttaatg gggagaccaa agagacacaa cccatgttct
      601 taggagacgg aagcatggaa attaagaaac aaattacggg gatgagaaga ttactgaatg
      661 accgtaccgg gaggatctat caacgcgtcg gcaaagaagg ggaaaaacta aaagaagagc
      721 cccaggatgt ggatttagtc tggcctcaga gattgaactc ctccaccgag gccccgcagg
      781 gcctccaccc tccttcacgt ggggcgtgga atgaactacc agcccaaagc gggcagttct
      841 cagggcagcc cggtccacgt tctagaacct tccagagtca gccccacatc tctgcaagtt
      901 ccaatgggga acttccaggg gtgaattcga cggccggatc caactgctgc acttgtaact
      961 gccagtcaac cttgcaggcc attctccaag aactcaagac catgaggaaa ttaatgcact
     1021 ttcaagcagt tggaactcaa aacagacaac aacccccaat ttcccttgtg tgctcccagc
     1081 gaaccgccat ctcacgcaag agaaataaaa agaaaaaggt gctcccgaag gctgtggaac
     1141 ccatgactac tgtgaaacca aagcctagtc cctcggaaac tgagaagaag ccagcagccg
     1201 tggccgcaag gccacctggt ctccaagctg cagagtgcgc ttccgctgag gagaaccaca
     1261 tcttgggatt tggcattgtc ctcaaatcgc cgtcctcaga tccagaagtg caacttgctg
     1321 aaggcttcga tgtgttcatg cccaaatctc agctggactc tatattgtca aactacaccc
     1381 gctcaggaag ccttctgttt agaaaactgg tgtgtgcatt ttttgatgac aagactttgg
     1441 ctaactcctt acccaacggg aagaggaaaa gagggctcaa tgacaaccgg aaaggactag
     1501 accaaaacat tgtgggtgca ataaaagtct ttacagaaaa ctactgtact gcgaatcacg
     1561 tggacaaact tcccggccca cgagactggg tacagattct acaggaccag attaaactgg
     1621 ccagaagaag gttgaaaaga ggctcagcag aggtagctga cggtgatgaa agactggatg
     1681 gcatctctct acccccaaca gggcacgcgt ttgtcagcag gagagagacc ccagaggacc
     1741 cagaaccagg ttccattgcc tagacttgca ttctagaaca ctctttgctt cctccaaggt
     1801 ccatggagca gttgcaggtc ctgcagtgtg ggcgtcctgt ggtggcttgt cttgtcggaa
     1861 tgacttcttt gtaacctgtg gtatcacaac tccagtttgg cataatattt ttttttaaaa
     1921 gaaccatgct tacagctgtt accctggaag catccagcgt gtgtgacccg tcctaaagaa
     1981 gccatcccct tcctgtgtct gtctgttcac agcctcggtg tgaagacaag gtctttttaa
     2041 acattattta ttttattgtg aattgcttgg ctgcatgcag aggaaacctt ctcttccagg
     2101 actgacagag gttacaaagt agcgctaact agcccctctt cagcttagag aaggaaacag
     2161 ttgttctgag aggcaggaga gctcccacct ggccagtgac gtcttttagg acttcagtca
     2221 tggtgacccg aaacagacat tcagaactgg agaactacaa atgatgtacg aaataaatga
     2281 tgttagggaa ttaaaaaaaa aaaaactttc acataattta tgatgatgta atgacaaaaa
     2341 aataataata ataactcaaa gtaaccagcc atctgcttgg gagccgtggg gccttttaaa
     2401 tacagtttca gctgagcagc tttggttttt tcctctctcc atgttcattc tgcagtctgt
     2461 ttggtccctc acacacttgc cttctatttt atgtaacact aaatatgagg gggaaatctg
     2521 ggtttatttt aaagaaatct ttgctgtgag gatatatgtg tcacaaacat atttacctcc
     2581 acatttgttt tgctaatgga atcgtgcatc ggaaatacct tagacgcctt gcgtctacac
     2641 cttatttatc aggtaaagca aattgcctcg aatcttgggc acttgacacc aaggccaaaa
     2701 atagccgcaa aagaaaaaca aatgtggctc ccatccacca aaccccaggg ataaaagcct
     2761 gcctcgacca aagcttagcc ttttccctga tactgttgca gccaccgatt aaagccaaca
     2821 cttagtgtgg tgcttcacca gtgagagaac tgagaagtgg gtaagcagtt gcctaggacc
     2881 ggagtacccg gccagctgga catagaacct ggatatactt aggatcctgt ccagtggact
     2941 gcgtcacatc acgcagaaca cagaacgcta aagctaggat cagagcagta ttccagaggc
     3001 cagctagtga agatgacagg cgatatccct ggaacgtctc taggtgttgc agtcagtccc
     3061 aagagtaggc atctcccccg caaatgcacc ttttatttct ctccgtttgg aggctatggg
     3121 ggccacttgg aaattgccct tatcctaccg cttagttacc atgggtttct gtgtcccgca
     3181 gcccccaatc cgtctgtttt atcgagtggt ctgatgagct gcagacagac caggactcat
     3241 tcactctgca gcgggtcctg ataaaacaaa aaagtcttct gcctcccaga atgaaagact
     3301 cctcaagggg actagagaag ctgaattact acccttcgct cactaaaatg atggtgaatt
     3361 tgtttttagt acagggagaa catatgctca caactgggtg tgcactgtaa accttcagaa
     3421 agcactttct tcccagcctg ggtgacagct tgaagttctc agtacttgag cagggtaggg
     3481 attgtttgac ttacagagaa gggcggtgga ttcacaaact ggagagacag atcaaaactg
     3541 taacagtcaa accgtgtttc gtaagtttac attgtactcg tgttaactta ctgtgtactg
     3601 tgcagctttg ttcagaaacc tttttatagg ctttcttagc aaaaaaaaaa aaaaaaggaa
     3661 aaaagtccgt atccgtggat attatgcctc aatcttctgt acatatgttt tattaatatg
     3721 taaatattca gattttttaa aattatgatg ttcttttaaa agaattcaat gcaaagctag
     3781 ttgtgaaaat ggtgtgtaac actgtgttgt gatttcaact cccaacatgc cctttatgtc
     3841 cattctggaa aaatacaata aattacttta atcgaa
//
