LOCUS       XM_006250982            8255 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus BEN domain containing 4 (Bend4),
            transcript variant X1, mRNA.
ACCESSION   XM_006250982
VERSION     XM_006250982.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006250982.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006250982.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8255
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8255
                     /gene="Bend4"
                     /note="BEN domain containing 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 71 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:681008"
                     /db_xref="RGD:1584735"
     CDS             30..1661
                     /gene="Bend4"
                     /codon_start=1
                     /product="BEN domain-containing protein 4 isoform X1"
                     /protein_id="XP_006251044.4"
                     /db_xref="GeneID:681008"
                     /db_xref="RGD:1584735"
                     /translation="MEPEMQAAEEGPSAPRIYKQRGPYSVLKTFPSRRPALAKRYDRP
                     SLLELSPARPSPLPPPPPPPPFASLAAVPISSSEPPPFPTQPSYPAGSGRAPAAAAAS
                     SSSPSCTPAAPPGHPRTPAPPPPPPPPPPLAAPAASSSSSFAAVVRYGPGPASGAGSS
                     GAGSDGASLELSAESRMILDAFAQQCSRVLSLLNCGGKLLDSSHSQSMISCVKQEGSS
                     YNERQDQCHIVKGVQSQTSDNIDIEMQYMQRKQQTSAFLRVFTDSLQNYLLSGNFPTP
                     NTSSVSEYGHLADVDPLSASPVHTLGGWTSPATSESHGHPSSSTLPEEEEEEEEGYCP
                     RCQELEQEVISLQQENEELRRKLESIPVPCQTVLDYLKTVLLHHNQLLPQPAEQPTEG
                     SKQLLNSYPVYITSKQWDEAVNSSKKDGRRLLRYLIRFVFTTDELKYSCGLGKRKRSV
                     QSGETGPERRPLDPVKVTCLREFIRMHCTSNPDWWMPSEEQINKVFSDAVGHARQGRA
                     VGTFLHNGGSFYEGMDHQASQDEVFNKSSQDGSGD"
ORIGIN      
        1 cgcggggcgg gcagggcctc agactcggca tggagcccga gatgcaggcg gcggaggagg
       61 ggcccagcgc gccccgcatc tacaagcagc gcggccccta cagcgtcctc aagacgttcc
      121 ccagccggcg gccggcgctg gccaagcgct acgacagacc ctctctgcta gagctgtcgc
      181 ccgcgcggcc gtccccgctg ccgccgccgc cgccgccgcc gcccttcgcc tcgctcgccg
      241 ccgtgcccat cagcagcagc gagccgccgc cgttcccgac gcagccgtcc tacccggccg
      301 ggtcaggccg ggcccccgcc gccgccgccg cctcctcgtc gtcgccgtcc tgcacacccg
      361 ccgcgccccc gggccacccg aggactccgg cgccaccgcc gccgccgccg ccgccgccgc
      421 ccctcgcggc ccccgccgcc tcgtcgtcgt cgtccttcgc cgccgtcgtc aggtacggcc
      481 ctggcccggc gagcggcgcg ggcagcagcg gcgcgggtag cgacggcgcc agcctagagc
      541 tcagtgcaga gagccggatg atcctggatg cctttgccca gcagtgcagt cgtgttctta
      601 gtctcttaaa ttgtggagga aaacttctgg actccagcca ctctcagtcc atgatttctt
      661 gcgtcaagca ggaaggctct agttataacg aaagacagga ccagtgccac atcgtaaaag
      721 gggtccaaag tcagacctct gacaacatag acatagaaat gcaatatatg caaagaaaac
      781 aacagacttc tgcctttctg agagtgttca ccgactctct ccaaaattac ctgctctcgg
      841 ggaacttccc cactccgaac acctcatcgg tcagtgagta tggccacctg gctgatgtgg
      901 accctctctc agcctccccg gtgcacacgt taggtggctg gacctccccg gcaacatctg
      961 agtcccacgg tcacccgtcc tcctccacac tgccggagga ggaggaggag gaagaggaag
     1021 gctactgccc tcggtgccag gagctggagc aggaggttat ctcgctgcaa caagaaaatg
     1081 aagaactcag aagaaaattg gagagcatcc cagtgccctg ccagaccgtc ctagattacc
     1141 taaagacagt gctgctgcac cacaaccagc tcctgccgca gcccgccgag cagcccaccg
     1201 agggaagcaa gcagctgttg aacagctatc ctgtgtacat aacgagcaaa cagtgggacg
     1261 aggctgtgaa ctcttccaag aaggacggga ggcggcttct gcgctacctc atcagattcg
     1321 tcttcaccac cgacgagctt aagtactcat gcggccttgg gaaaaggaaa aggtcagtgc
     1381 agtcaggaga gacaggtccc gaaagacgcc ctctggatcc agttaaagtc acgtgcctcc
     1441 gagaattcat taggatgcac tgtacctcaa accctgattg gtggatgccc tcggaggagc
     1501 agataaacaa agtgttcagc gatgccgtag gtcacgcccg acaagggcgg gcagtgggga
     1561 ctttcctgca caacggtggc tcgttttacg aagggatgga tcaccaggct tcccaagatg
     1621 aggtcttcaa caagagctct caggatgggt ctggggacta gcggacagaa cctagcagtg
     1681 gtgttttggt tttttgtgta agagctccag ttgtgaatgt ccatcccctt gtctcttaga
     1741 gtccaaagca tggtattccg tcatacttta cacattcttg acccactgcc acagttccca
     1801 aatacgaatc cactttagga ttcggggggg aaatgagcag ctgcagtaga ttggggtgta
     1861 ttctatcaca gaggagaatg tacagttaac atgaagtcat tactagctgg tcattgagag
     1921 tgactccagc cccagatctt cagggaagcc tggcctcctg agcagagctg gtctccaggg
     1981 aaggttcagt tggtgttcct gcacatgggg gaagggaaga caagcaacgc gtattttctt
     2041 taattcaagt aagctgtctt tcattttcct aagacttggt tttagagttc tcagcaaaga
     2101 cacaagctag gtgagactgt aagcttccat ctgttttaaa ctcttacgat aagccagaac
     2161 agaggccatg tctgtagagg gtacttgatg gaagtcagct atttttctgt tctcttacac
     2221 gcaaaactca ctgtgtcaat cagaaaggca acctcattgc tgtggtttac aagcagagat
     2281 tctctttaca tctttaggaa acatccaaag attcagaccc attttcaaat gcctcatttc
     2341 ataagttcta acacatagcc ttccatagcc ttacatcatg ctttgttgac acaatgccag
     2401 ggtggtgggt tcactgagaa cctctacgag ctagctattt ggtaagatca aacacagggc
     2461 atgaatgaca gtatctgctg ttgataaagg gtcgggtatt gtagacacgt agcttcagtg
     2521 ccgttctgac aactatgcaa tggcttatgg gtgatttctc tgaaatttga ggcctttttc
     2581 tgggctgagt gaaggtttag aatatataaa acttctgttc cccactgtca tggatgaaaa
     2641 cacctcaacc agctgtgcct ctccttttcc cacagtccct ctgtggtcta agttctgagt
     2701 tactgctctg cttccctgct taatttgcgg catccatgtg agaagtcaca catgttagtg
     2761 atgtctagta aaggctacag aggtgctgga attgttcctg atgaaggtta aacttttgga
     2821 catgaggaga aggctagttt tatttttttt aatccctccc tcccccgttg gctttgttaa
     2881 acaaatcaag attactgtgt tctttgtgga accaaaagct aaatgggcag catttatgaa
     2941 aattatgaat gccatctaca aacacagcaa agagctttga aatgggatag aaattcagac
     3001 tgagtatcca tttagaaaag gtctgtatgg gaggccagtt ttgtcagaat aaatcagaca
     3061 tcctttatat tcagtattta gcatcggatt ttgaacaaat cggccaaaca gtttagaagt
     3121 aaaagaaatt aaacgagtaa atgagatgtc atttacatgg accgaagacc agtgtctttg
     3181 gctgtccaag agaaagggat gttgttttct taattaggaa agctgtctcc ggatagcatc
     3241 caggacagca tgttgatagc ttcttgctgg tctggggcac tcactatcat cttgtttaaa
     3301 atcctcatct gcagcactga agacgtctct cattgctgtt tatccacacg gctgagcccc
     3361 gttcctctct ttggtggttt atttactgcc tgctcaacct cattgagttt ggtcagtaag
     3421 tgtgaaaagc tttctttggt tgtcctgtag tctttaaacg atccatcgag ttttctcgtc
     3481 cacaagtttg caactctgcc taagtatgga aagttggcag gagcaaggct catggcgctg
     3541 gagcttcaga gcccccatgt gaggaatcag gaagacccca tggagtgatc ctcctccacc
     3601 tctttaaagg ctctgatctc aacaccagct cggggtgccc tgggataagc tcttgtcagt
     3661 gaagcttctc attgtcatct gcataggctg gtactagttt tagttgagct tgtgctgtgc
     3721 tgtgctgtgc tgttcagcct acatcacctt ccacatcaaa tgtagcttta gaagagggta
     3781 tctaaatcat ttgtgggtac catacgactg cacctctcaa gcccactgtc gggtcagggt
     3841 cagcagctgg aagaattgat ccttgataga gggttgcata catcgcttta agtcttccac
     3901 ttcacttgtc gaggttttct ggtcacgtga tacagtcgtc ctgattctgc ttttgcagtc
     3961 ttcacttctg gtctccttaa cttcagggtt ttcccaggtc cgggcttacc gatttggtta
     4021 aactccccag ctccgttgac atgtgaatag gaacaagact ttctttccta cttacataaa
     4081 gaagggaaca gcgtatagac aagtaggcaa tgatatactc caccaggggc ttttgccgct
     4141 tgcccagatg tgcaaacggc aacatctgct ccctctactg caaggtctag gtaagaagtg
     4201 cagagcactc ctgatgggct gttgtcattt ccatctggtg acacgcttgt cataaactcc
     4261 acagtgacaa gcactgttgt gggagcgctg ttcaatagga tattgaaaac ggtatttctt
     4321 agtgtgtgat ccaaggtctg ggaagtctga cctaggaggt ctccagtgtc aagaaacctt
     4381 aggtggagcc cgtcatcacc cacctgccat tacgtcatca gtcttgcact gggccgcagt
     4441 tcctcttgct gctggatatg ttgaccctgc tacagccgta gtgcttagca actgctttta
     4501 gggtacagac ttgcaggttg tacctctttc caggaagttc gagggaacat tctgtgcatc
     4561 catcttggag cattttggcc accaactctt tgagcctttg acttcccaca agtatggggc
     4621 aggggcagaa acctggctgc tgtttctgcc acttgaaagg acatctgtgt caggcttgcc
     4681 actgcatctg ctctgtcagc actttcccac agtggacatg atactggctg ttgtcctcag
     4741 catcctagcc agtcctcaca ggtaatgaca ggaggacctg aacgcctcag cccagtcagg
     4801 tgttcatttt tcctgcctgt ttatgtgatt tctgctgttt tcttcagctc agttcacccc
     4861 gataccagca gtcgaacatt gaggtttgct tcagcatcct gctggctctt tctttgcctt
     4921 tgtggatatc cagttaaggc tgggctgcta ctcaagtcag cctgtgaaag gtgtcacttc
     4981 tgagaactca cgatcaaact ggctaccctg atttctgcac atgcctttgg cttgctcttg
     5041 gaggtctgaa gatgttgtct gtcattattc tggcagtaag acacatggct tccacaaggc
     5101 aaaagctagt cctctgtcaa cttttagaat tacccgagcc actcagtgtt ggttggaagt
     5161 agacttgagt taaaaatatc tcaggatgga tgcaactgta ccttgtcctt ggtgaggaaa
     5221 ccgtggttgc caggctggcg taattaaatg gctttttcat cagtgattag gccggtccgg
     5281 agtcccagca tcagaggctc catagttaac agtgacgctt tccaaattaa aatgctttcc
     5341 ctctcatggg gatttaactc cccaggcaca gatcttgcca agagaatgat gagccctcag
     5401 gggatcaaga ccaggaacct gtggagggga gcagtgttta gataaggccc catttctcac
     5461 cagcccattt gtgggtgttc agcctcttgt ggtatcaaga aaagtgtagc tgtttctaca
     5521 agtccttaac cctgttcctc atctgtcaca gcatttagga gactgtcacc atgtatgtgt
     5581 ttcataaggt ttccccaagg cagagagcag aggagtaaga gggttgatct cttggtgagg
     5641 tgttgaggag tgtgtgtccc tgctagacgc tgtggtttat gtagactgtc ccttaccctt
     5701 cagtgatcag catcaaggcg aggcctttgt caggatgata aggagacaca gttaactaca
     5761 atcttacttg acacagccac tctacacggc atcaggtgat cggcactgac agcaatagga
     5821 ctgtggtttc catccagtcc aatagtgatt cttgaattat ttgctgttta cacaaaattt
     5881 acacaataac tcagacttag gaatctgcag gtgtgtggtt tctacatatc cctgccatct
     5941 aatgacttgt gcctctcatg caactctgag aaagtggatg gcatgcactc cgtgggaaga
     6001 tgtgagttat gtctggaacc caaacatcgc cctcatttga gttctgtgtt ttgtggtaca
     6061 ggggtcaacc attattcagt atgtgctcta gactaaccct gacatccact gactacctcc
     6121 tgagtttctg tataaaccag ttacattttt tagtttaaag gtcatttttg gtgacttaga
     6181 aagaatttta aatgtatcgt ttcctcagct agtgctgtat catctcacag tacagatctg
     6241 tgttaatttg tgacaggttt cacgtgtggg tttgtagaag tgtaatagag agtggctttg
     6301 cacatacggt gtgagtcttg ctgctgtgtg cttaatgtgg cgacacttgc caaagctgct
     6361 tggcaaacac gtcaaaaggg atgcttgagt cacaactcaa atgcaaatgt gtcgcaacag
     6421 gagtgtgtgt cactatgatg tatttttgta aacacagtga tggcctcttt cagtcatata
     6481 agtactggat aaaaataacc actggaggga aatgtcactt aactgatggc aaagctactc
     6541 atactgtcag ccaggggcgt gtgtgtgtgt gtgcgcgtgc gtgcgtgcgt gcgtgcgtgc
     6601 gtcatggaga gggaagaatt gacatcagca atatggaggg caaaagtaat accccatcaa
     6661 gttagaggcc acttgcactc cccatagtat atggatttta ggaaatattg agagaactgg
     6721 aattctcaca ctaaattact ggccttgtca gtttgactac tgaaggcagt ggattaccaa
     6781 aaattttgct tctaagcctc catagctgtc agtaagggct atgtcttgtt gaatcacccc
     6841 tttcacctgt tccccaaatt gcaatgaaag tgatatgcta gtgagacgga ctcacaaacc
     6901 tgggtcactc tgaacatggc agcagtacag gcaggcagat gcgcctcagc gtgctgtagg
     6961 agatcactcc catagcaata gtaactacac cacctaagtg tgactcctga ctcctgctag
     7021 ttgcttcctc tcctctgctt ggacctcaca gctgccctaa gagctgttcc tgacagggcg
     7081 ctcacctgag ccttctcagc tcagtaagca gaatggcctc ttctatctgt gcccgtcagg
     7141 catagttctc aaagtctgcc aacactttgg agtgaacgtt atttgatttt ctgatgctat
     7201 caagggaagg ttggcgttct atcactaaat atgcaggtgc ttaaataaca agcttgtgaa
     7261 gcctccaggc ctctcgggcc ggcatgaggc gtgccctgag tggcatcctg tgagggagac
     7321 cagaaaccct taaaggaagt gggcacatca ggagtctagt ccctcccacc tttctagatc
     7381 ccctgtacaa agatgcagga acaaaggaag actttggatc tcgagattag atcattcacg
     7441 tgacacctgg tgatagctct ggctattggc cagtgttccc cctctgtgtg gctgattttg
     7501 cagcctctgg tgacacttcc agttccgtgg gacgtgaggt tttagttgac gatgtcactg
     7561 tgagaacggt agaggagact gtaaagacta tagtgacctg ttgggtttgc ccctgtagtc
     7621 gaaaatttaa catccttcaa acgcatgcca aggtcacgat gagcctggct tgtgcctcgg
     7681 gagcaaggcc tgccggaagc aggcggagac tcagtcactg accagcctgc ccctgccctg
     7741 gctaagcctt gcttgccctc atgttgctcc tgtgcagaac ggcatgtagc agctaacact
     7801 ggggccagtt gcctttactc tattttctat gatgaatact tgtggagaaa ctgtgacaaa
     7861 tccattgatc ctgatatttt tattgttgga gtcttgtggc ttctctgaat aatttctatt
     7921 tgattgtact gtgtagagtt catacacact agggatatgt taaagaagct aaaatgcata
     7981 gtataatata gaatagcaaa aaaatttttg tgaacaattt atatagaaga gtgagttgtt
     8041 ttttaagtgt taggccattt cttttaggaa cctaaaacgt tttaagagtt ttttaaacat
     8101 tcaatatttt taattatgag agacatttgt tactagagct gattatttcg ggtgttctaa
     8161 ttggaatatt gattttctta cctcatatac ctctagaatg ccacatgttc tgttgggggt
     8221 aaaattgcac aataaatgtc aagttatctg ttaaa
//
