LOCUS       XM_039100502            3849 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus BEN domain containing 2 (Bend2), mRNA.
ACCESSION   XM_039100502
VERSION     XM_039100502.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3849
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3849
                     /gene="Bend2"
                     /note="BEN domain containing 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102549010"
                     /db_xref="RGD:7741042"
     CDS             67..1035
                     /gene="Bend2"
                     /codon_start=1
                     /product="BEN domain-containing protein 2"
                     /protein_id="XP_038956430.1"
                     /db_xref="GeneID:102549010"
                     /db_xref="RGD:7741042"
                     /translation="MPCCVCIHSGVGATPQIPPQVVNFPAPVERGNEHGNDLVHPIEQ
                     EEYLGNPRRNIRLPKFHLLTAKNKPTPTYAACYLANVIFSEEILTLSSVTERTSRYIF
                     MDQNKMSAIREYLLTVFPNYDLRERGKDWKDCISAVSFMIESLYTEAEIPANRNVSVP
                     MSTNWCAGINNDAGEGPSQWLQDVRESVRRERVDFEHIPEGNGNAAIHPDQLVFIGDP
                     SRDIHIPYSVLKIAKTHLRPDLAAKYIILHLFPEEVLIESNVYGNMQCGLFALDSNRI
                     DALREFLQDNYPEHDLEETGYHWKLCVTAINSCLQILRQGPRNVTV"
ORIGIN      
        1 aatgaagcaa acaatgcaca gggaataaat aacctacttt tattggaaaa tgatggtggc
       61 caagctatgc catgctgtgt ctgtattcat tctggtgttg gagccacacc acaaatccca
      121 ccccaagttg tgaatttccc agctcccgtg gaacgtggta atgagcatgg taatgactta
      181 gtgcacccta ttgaacaaga agaatatctt ggtaatccaa gaagaaacat caggctacca
      241 aaatttcatt tgctgactgc aaaaaataag ccaactccca cttatgcagc ctgctacttg
      301 gctaatgtga tattctctga ggaaattctg actttaagct cagtcactga acgtacttca
      361 cgttatatat tcatggatca aaacaagatg tcagcaataa gagaatatct cttgacggtt
      421 ttcccaaact atgacttaag ggaacgagga aaagactgga aagactgtat ttctgctgtt
      481 agttttatga tagagagttt gtatacagaa gcagaaatac ccgcaaatag aaatgtcagt
      541 gtgcccatgt ccacaaactg gtgtgccgga atcaataatg atgcgggtga gggcccttct
      601 cagtggcttc aggatgtcag ggagtccgta agaagagaaa gagtggattt tgaacatatt
      661 cctgagggca atggtaatgc agccatccat cctgaccaat tggtatttat tggagatcca
      721 tctagagata tacacatacc atattccgta ctgaaaatag caaaaaccca tttgcgtcca
      781 gacctggcag ccaaatacat catactccac ttgtttccag aagaagtcct aattgaaagt
      841 aacgtctatg gcaatatgca gtgtggcctg ttcgcccttg attccaatag gattgatgct
      901 ctccgagaat ttcttcagga caactaccct gaacatgatc tagaagaaac gggatatcat
      961 tggaaattgt gtgtgacagc catcaacagc tgtctgcaaa tccttagaca aggcccaagg
     1021 aatgtcacag tctaatcatt ctaattcctc ccaacaactc tttccacgga gtcaaccaga
     1081 catgaaacta actgattgca cttacccaat ttttttctaa aatagtagat cattttgtaa
     1141 gtttccaaag tagtaatgcc agatttagca tgtcgtaatg atgacgtttt gtactgacta
     1201 ccaattaacc aaagatcttt ttctgttttc aagaattagt ttgtctctgg acaaagtggg
     1261 gaacagtgta cttctttctt gagcttccag ttagaggaat actatggaat tctttttttt
     1321 tttccttttc ttttttcgga gctgggaccc gaccccaggg ccttgcgctt gctaggcaag
     1381 cgctctacca ctgagctaaa tccccaaccc atactaggaa attcttaaat gattatttta
     1441 cctggttatt tgaataagga gtgagagcag tatacttagc acttaatggc agacgaaatc
     1501 tgagtgcctg caacacgcag gtagagaact gtaattggaa aaatacaaga tgtgttaagc
     1561 atttcttgca tatggtagaa acttggtatt tgtcaagtca gttgacagtt tagaacttag
     1621 gcaaaaactg ttgattcaga aaagacatgt tatctactta catccagaat gcctttggtg
     1681 gcttccttat acatcgtata cagtaacaaa attgctgtca cattcacttg acatagcctt
     1741 ccagagataa gacttagttg ccttgatata ctccagatag agtagtattt ttaaaattac
     1801 ctcttgatac catttttatt acacaatttc tcatgttaaa tgccagggga gctgacattc
     1861 ctcttagcaa ttaaactttt aaaatgtctg tgagtaataa ggatctgacc aaattcggac
     1921 actcaaaata tttttggttt ttgaagtgtc tgggtaaagg ttttaatata ctaccatttt
     1981 ttcagatacg ttctactagt tgagtgcaca caaatttaaa tctgacatta ctttgtgcat
     2041 aagaaaacaa tggtcagaaa ttcagagaaa agtgctctta aaacagtggt tatcaacctg
     2101 tgggtcacag tccttttggg gacaagtgac cctttcatag gggtcacata tcagatatct
     2161 tgctataatt gggggtcacc aaacatgaaa aactatatta aaggattaca gcattaggaa
     2221 ggtttagggc cagtcataaa ttaatattca cacaaatatt caaataatta atattatcag
     2281 gaatattgga gaaatgaaaa aggtccatct tcctcatgaa tagtgttttg ttcttaacgt
     2341 aagtccctta ttatagagaa tgttattgga tgatttagcc acagaaatag cccaattatt
     2401 tgaatatttg tgtttaggaa acattttatt agttataatg ccatctttta gctgtaaacc
     2461 tatagaaatt ttatatacgt gaagtaaatt ttaaattagt tacaaagttt cttacatgaa
     2521 acaccagtat aacccaaaat tatatcttac atggttgacc tccactaact tcagtatttt
     2581 gataaaaaag aggggaaaaa atccaatgga aagagataat gtacgtccat taagtagtat
     2641 aactattttg aagtcctgtt attgtcacaa cttgtgagag atattaatat ttttaggtga
     2701 ccaattttta gaagacatgt acacacccac caatttgaaa actaaattca acttttagag
     2761 tcttaatata atacggtatg tcttcataag gattatctgt gacatattag atgttgtaga
     2821 tagttgtggt aatatgttta ttaccataat atatgcacaa ggctctgggt taaattttgg
     2881 taccaaaaga aaaaaaagaa attaacattt taaggctctg taccctaaat aaatatataa
     2941 acaaaggaat attttccttt agctttacaa aattctaagg ggtatttaca aaggatttaa
     3001 aaagtagata gttaaaaaat attttataat tgacaaaaga attttgacaa gaactattta
     3061 gacttactta tttaagcaag tctctgcctt catcattcag tttaaccagt cttataaata
     3121 ttgatgtttg agctaacata gaaataaaaa cccatgctat aaatatacat caaaacatag
     3181 cattgtcctc catgaatcca tgcatctatt tggtagttta aaatgcaatt taaaaagagg
     3241 aaagtgaaat tacatgctag gcaagaaatt acttcaaact gcatatacag atttcaaatt
     3301 gaacttgtcc atttcaaaac aaaaccacaa gatcaatatt ctctgtattt gatcagtttt
     3361 taagacacat ggccattgat taaataaatc gtttggaata gtgctccaat agaacgtccc
     3421 actggaatag aaacattcat gacttgttcg gtgtgctagc cactaggcct atgtaactat
     3481 tcaacacttg aaaaatttca tgagttaaat tcgaattttg ggtgctaaaa ttgaaaggtg
     3541 ggtttggatg gcacatttga gatatattgc catcttattt ctgattttat aataggaagg
     3601 acttaatttc gaggcccata catactaggc aagaacttta aagatcaaag agtaaccttc
     3661 atttgtataa aatattcaga atagctccta ttgtttgaga tataacatgt atatcttctg
     3721 tgaaaatctt atgttgcaag ataatacttg catgatgata ctgaatattt tattgtacac
     3781 ttgctgtctt caaaatttta cagatttcaa cctgttgtat tatcttggta aatgtctgat
     3841 tttaagact
//
