LOCUS       NM_001420935            1619 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus BAF chromatin remodeling complex subunit BCL7B
            (Bcl7b), mRNA.
ACCESSION   NM_001420935
VERSION     NM_001420935.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC160857.1, SRR26643293.84426.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760393,
                                           SAMEA5760475 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-199               JAXUCZ010000012.1  27146433-27146631   c
            200-275             JAXUCZ010000012.1  27144364-27144439   c
            276-372             JAXUCZ010000012.1  27138176-27138272   c
            373-543             JAXUCZ010000012.1  27135063-27135233   c
            544-623             JAXUCZ010000012.1  27134553-27134632   c
            624-1619            JAXUCZ010000012.1  27133412-27134407   c
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q12"
     gene            1..1619
                     /gene="Bcl7b"
                     /note="BAF chromatin remodeling complex subunit BCL7B"
                     /db_xref="GeneID:368001"
                     /db_xref="RGD:1597090"
     exon            1..199
                     /gene="Bcl7b"
                     /inference="alignment:Splign:2.1.0"
     CDS             108..716
                     /gene="Bcl7b"
                     /note="B-cell CLL/lymphoma 7B; BCL tumor suppressor 7B;
                     BCL7B, BAF complex component"
                     /codon_start=1
                     /product="B-cell CLL/lymphoma 7 protein family member B"
                     /protein_id="NP_001407864.1"
                     /db_xref="GeneID:368001"
                     /db_xref="RGD:1597090"
                     /translation="MSGRSVRAETRSRAKDDIKKVMAAIEKVRKWEKKWVTVGDTSLR
                     IFKWVPVTDSKEKEKSKSNNTAAREPNGFPSDASANSSLLLEFQDENSNQSSVSDVYQ
                     LKVDSSTNSSPSPQQSESLSPAHTSDFRTDDSQPPTLGQEILEEPSLPASEVADEPPT
                     LTKEEPVPIETQTTEEEEDSGAPPLKRFCVDQPVVPQTTSES"
     exon            200..275
                     /gene="Bcl7b"
                     /inference="alignment:Splign:2.1.0"
     exon            276..372
                     /gene="Bcl7b"
                     /inference="alignment:Splign:2.1.0"
     exon            373..543
                     /gene="Bcl7b"
                     /inference="alignment:Splign:2.1.0"
     exon            544..623
                     /gene="Bcl7b"
                     /inference="alignment:Splign:2.1.0"
     exon            624..1619
                     /gene="Bcl7b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggtgacgt gctgcggtgg cagcgggtgg acgacgacgc gtgaggcgcg tgatatcccg
       61 cgtcttggga gcagtgtccc ggcccccagc cactccccgc cgccgccatg tccggccgtt
      121 cggtccgggc cgagacccgt agccgggcca aagatgacat caagaaggtg atggcggcca
      181 tcgagaaagt gcggaaatgg gagaagaaat gggtgactgt gggtgacacg tccctgagga
      241 tattcaaatg ggtgcctgtg acagatagca aggagaaaga aaaatcaaaa tctaataata
      301 cagcagcccg agaacctaat ggttttccct ccgatgcctc agccaattcc tccctcctcc
      361 tcgaattcca ggatgagaac agcaaccaga gttctgtgtc agatgtctat caactcaagg
      421 tggacagcag caccaactca agccccagcc cccagcagag cgagtccctg agcccagcac
      481 acacctcaga cttccgcacg gatgactccc aaccccccac cctgggccag gagatccttg
      541 aggagccttc gctgcctgcg tctgaggttg cagatgaacc ccccacgctc acaaaggaag
      601 aaccggtgcc aatagagacc cagaccactg aggaagagga ggactctggt gccccaccct
      661 tgaagcgatt ttgtgtggac caacctgtag tgccgcagac cacgtcagaa agctagcacc
      721 ttccggcccc tcgcctcctg gcccctgcct ctatttattg cattctggtc tggccgagct
      781 ctgatgctgg ggtccgggca agcactaggg tccagagcct gtgcgtggga gccctctggg
      841 ctagaaggct gacggagggc gtggggtcgt cgcaccatct tcctgtccct gacacttgtg
      901 tctgcttgct cttgggcaga ggagcgctca catcttttct gcaccccaag taggccagag
      961 caacagggtt catgtctcac ctccgaacca ctgcacggag ctgctggcgc cgccacgagg
     1021 agaaaggtgt ggagggcacc ctagagagag tgcctagatt actcgaactg aatggagact
     1081 gtagagtatg gactgtgccg cggggccagg ccctgcaggc tgctgctgga agagggactg
     1141 accggtagag aagcggagaa cacgggagaa gaggctcttc caggagggag gggcttccac
     1201 tgtgggcagg agacccacgg gggatcgcat ccttccctga ggcaggccgg cctctgttgg
     1261 atgccccagc cgctcccagc cctgtgcctg ccagaacctt ccgcttcctc acgctcacta
     1321 cgcacacgcg cagcttcctg tcttcacctg tttcattcca gcatccctgc ctcctgccac
     1381 agaaaacccc agccatgatt ggaggttctg accacagtac ctgcccccag tactctttca
     1441 gctcagactt tctagaacgt tcccttttct ttaaaatctg catgtttaat taaactttat
     1501 gattttattt tttgtctgaa aaaaagagaa gtttaagaaa atggaaatgg gtaacagcaa
     1561 gtgaagacct attttagcac tgaatagagt atttttaaaa ttaaactatt tgaaatatt
//
