LOCUS       NM_001398956            3784 bp    mRNA    linear   ROD 12-JUN-2023
DEFINITION  Rattus norvegicus BAF chromatin remodeling complex subunit BCL7A
            (Bcl7a), mRNA.
ACCESSION   NM_001398956 XM_017598515
VERSION     NM_001398956.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000228.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001398956.2.
            
            On Dec 28, 2021 this sequence version replaced XM_017598515.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY724520.1, CA511738.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840129 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-230               JACYVU010000228.1  2449087-2449316     c
            231-312             JACYVU010000228.1  2442321-2442402     c
            313-409             JACYVU010000228.1  2438088-2438184     c
            410-577             JACYVU010000228.1  2429851-2430018     c
            578-699             JACYVU010000228.1  2422121-2422242     c
            700-3784            JACYVU010000228.1  2417391-2420475     c
FEATURES             Location/Qualifiers
     source          1..3784
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..3784
                     /gene="Bcl7a"
                     /note="BAF chromatin remodeling complex subunit BCL7A"
                     /db_xref="GeneID:690085"
                     /db_xref="RGD:1585128"
     exon            1..230
                     /gene="Bcl7a"
                     /inference="alignment:Splign:2.1.0"
     CDS             139..771
                     /gene="Bcl7a"
                     /note="B-cell CLL/lymphoma 7A; BCL tumor suppressor 7A;
                     BCL7A, BAF complex component"
                     /codon_start=1
                     /product="B-cell CLL/lymphoma 7 protein family member A"
                     /protein_id="NP_001385885.1"
                     /db_xref="GeneID:690085"
                     /db_xref="RGD:1585128"
                     /translation="MSGRSVRAETRSRAKDDIKRVMAAIEKVRKWEKKWVTVGDTSLR
                     IYKWVPVTEPKVDDKNKNKKKGKDEKCGSEVTTPENSSSPGMMDMHDDNSNQSSIADA
                     SPIKQENSSNSSPAPEPNAPVPSDGTEAKADEAQAEGKEHPGAEDASDEQNSQSSMEN
                     STNSSEKAERQPSAESGLAAETSAISQDLEGVPPSKKMKLEASQQNSEEM"
     exon            231..312
                     /gene="Bcl7a"
                     /inference="alignment:Splign:2.1.0"
     exon            313..409
                     /gene="Bcl7a"
                     /inference="alignment:Splign:2.1.0"
     exon            410..577
                     /gene="Bcl7a"
                     /inference="alignment:Splign:2.1.0"
     exon            578..699
                     /gene="Bcl7a"
                     /inference="alignment:Splign:2.1.0"
     exon            700..3784
                     /gene="Bcl7a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 accaggcttt gtgtgtgcgc gtatgtgtgt gagtgtgtgt ctgtgcgcga gtgagagagc
       61 gggcgagtgt ggcgagcagg acccggcggg cgcgctcccc cagcctctct ctcctctctc
      121 tccctccccg ctagaaccat gtcgggcagg tcggttcgag ccgagaccag gagccgggcc
      181 aaagatgata tcaagagggt catggcggct atcgagaaag tgcgcaaatg ggagaagaaa
      241 tgggtgaccg ttggcgatac atccctacga atctacaagt gggttcctgt gacggagccg
      301 aaagtcgatg acaaaaacaa gaataagaag aaaggcaagg acgagaagtg tggctcagag
      361 gtgaccactc cggagaacag ctcgtcacca gggatgatgg acatgcacga tgataacagc
      421 aaccagagct ccatagccga cgcctccccc atcaaacagg agaacagcag caactccagc
      481 cctgccccag agcccaacgc acctgtgccc agtgatggca ccgaagccaa ggctgatgag
      541 gcgcaggccg agggaaaaga gcaccctgga gctgaagatg cttctgacga gcaaaactcc
      601 cagtcttcga tggaaaactc aacgaacagc tcagagaaag cggaacggca gccatctgca
      661 gagtcagggc tggcggcaga aacatcggca atctctcagg atttggaagg agtgccaccg
      721 tctaaaaaga tgaagctgga agcctctcaa cagaactctg aagagatgta ggcgcctgat
      781 ggaaccctct gctccatggt tcgtggcagg tacatcggca ggcttaattc tagaacgcgg
      841 cccaagcgag actcctcttg ggtgcgagca gaactaacgt ttcaagttta cttaagtgca
      901 aatccaagaa aaaacctaga gcggcgggcg gaacttcgca gacactgacg gacgctgctg
      961 tgaaaacgaa aacacttcga accttcaagt gactgtcctc gggggaggtg ggtctcggcc
     1021 gacagctcag gagtgtctgc gcaccatctc ggaagccaag attacatttg tgttgctgct
     1081 gtgttccccg cccccacgtc tctatttaac gacataagct atccgagggt ggtaccaatc
     1141 aggaatttgt tctccatagg ggcttctggc tctccaacca gttccttctg ctttcttttt
     1201 ttgtgccttg taccctagag gtgacctctg gcatgcttcc tggtttttgc atccctcctg
     1261 gccaagggcc cactcggttt gattggctgc ccccttaact gcctctctcc tccctgcccc
     1321 gagactgctt caaagcaagc agggttgagc agcaggagac cgggcgcctc tcagtggctc
     1381 ctgcttcagg tgagcagtgt ttgggcacac cctgagcccc agcttccagg gcccctgggg
     1441 ctacaagttc agccccattt cccaagggct ggcctccttg gttcaggaca cgcccacctg
     1501 ctggagccac ggaggctagg ggtttgcaag ccaccgtagc ccagattaac atgcaaagcc
     1561 tttagaattt tccggcactt ccaccctatc tcctcccccc cccccccccc cccccacttt
     1621 agccaccact ggcactgctc tctccaggtc ctctgaagac tgaccgtgag cttgtctcct
     1681 taggatagta acagggctgg ggaggttggg agcaggcagc cggaatagct ggtgctgaac
     1741 ctctcccaca ggacaatgct tggatttcaa atccatggaa acctgctgcc cttcgtcccc
     1801 tgtctcctat ccccccctcc cccgcccttc tcctcccaga atcccaggct ggatgctcct
     1861 ggttctgact ctcagaggcc acaggtagat ggagtctcat tcccagtacg cgctgtcggt
     1921 ctccactggg ggtcggacct taacgattgg gcctcaaagg ccagaaacca ggcgaggcga
     1981 ggcgaggcgc acaggaaccg ggaagatttg cacaccccac cccctccccc ccagaaagga
     2041 gccaccgagg agctcccttc cccgatctcc tttgcacgga gacagcgctc tctctctctc
     2101 actcggtgga gacaccactt ggacggacca cccagctgtt gattcccgag gcctggtttg
     2161 ctcttcttaa ctccttgact ggacccctca gaccttaaat gcttaccccc tatgctttct
     2221 gcactggagt tcgaactccc taggagttgt acgttggggg ggccggggtg gggtttgttt
     2281 ttcttgtttt gtttgttttg ttttttgttt tgttcgctaa ctggtgcata ttcaggttac
     2341 caccttttga cgtgtggatc tttctccaaa ccaccgtggg aagtgtccgc caggctccct
     2401 tttctaagag tttctgaggg gacagctccc attttctttg tctggtttta agggagctgt
     2461 ctatttccta tacttcaaga agaatcaaaa tgttcctgaa ttttaaatac ctcatgcaaa
     2521 aaaaaaatta tctcctgaaa taatggaaga agaaaaaaaa aaagactttg agaatcgtaa
     2581 tgttgaagtt agcaatgcta aaacgtttcc gtcttaaaaa aaaatttctt gtacttagcg
     2641 attttgcccc tcaggcggtc cgttctgtcc agaactgtgt atgcccttcg tcgtggccgg
     2701 aaagaaacca gatgcatgac ctccgacgta tctcaaggtc aaggcagctt tacctccaga
     2761 tgtagggcga catttttctt tcgcagcaga actccattta ggtgaaagat gaattcggat
     2821 atttatttct tttttttttt ttccctggga aacaagaggt aatgttacaa tgtaaacagc
     2881 tgagggagaa cccaactggg gcatccacgg agccagcaag gcggccaggg ccgcccgtac
     2941 ctcttcgacc ctctgcagcc tctggacagt caggaggagt cgacgcagtt gagagggaag
     3001 acggcggtga gatccacggt accgaggctg tcattagttt ttctctgaag tgcctgaagg
     3061 taggaatggg ccgttgacgg ggaccattcg gatgcccccc accccgacgg ccacgccagg
     3121 caaagagcca gcagcccttg cactccgcgc tggccgagaa agccttccac gaggagcggt
     3181 cagactgcaa aatccaatgt gcttccttcc ccgccacggt cctctctccg agccgatggt
     3241 ccccatccct gaacccctag ccctcaaccc caccacagaa tctaagatct ttcatctggc
     3301 tgcgccaggg gcaggggatc ctaagcaaat gccttccgtg gacatcaggc cccatggcct
     3361 aaagggctcc cagggcaaac ttctcccgca aaacctgaag gtgggggaat ggcggctaca
     3421 cattccacaa agtgctacac ttgcacccac aaccgggaag gctatgaagc gatccttaga
     3481 gggtggtgac tgcccatcgt cagacggtgt cgtggcttgg aatgttatta ttgccgagga
     3541 cctggttaga ggtataaaga cctttttttc actgttacct aatctttttt ttctcccccc
     3601 tcttacaatt tttttttggt gtgttgtaca gcagtataat ttttcactta tttattccat
     3661 cggtagatat tgtttgtaca atgtacaatg gttttcattt cagaaaataa aaaaaaaagt
     3721 tctgatcata agtttggcgg cttagcccat tgtaataagg aataaaaatc aggtggataa
     3781 tgaa
//
