LOCUS       NM_001108279            3338 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus BCL6B, transcription repressor (Bcl6b), mRNA.
ACCESSION   NM_001108279 XM_001079767 XM_340830
VERSION     NM_001108279.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3338)
  AUTHORS   Okabe,S., Fukuda,T., Ishibashi,K., Kojima,S., Okada,S., Hatano,M.,
            Ebara,M., Saisho,H. and Tokuhisa,T.
  TITLE     BAZF, a novel Bcl6 homolog, functions as a transcriptional
            repressor
  JOURNAL   Mol Cell Biol 18 (7), 4235-4244 (1998)
   PUBMED   9632807
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_340830.3, XM_001079767.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..3338
                     /gene="Bcl6b"
                     /gene_synonym="RGD1563179"
                     /note="BCL6B, transcription repressor"
                     /db_xref="GeneID:360551"
                     /db_xref="RGD:1563179"
     exon            1..194
                     /gene="Bcl6b"
                     /gene_synonym="RGD1563179"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..1434
                     /gene="Bcl6b"
                     /gene_synonym="RGD1563179"
                     /note="B-cell CLL/lymphoma 6, member B (zinc finger
                     protein); B-cell CLL/lymphoma 6B"
                     /codon_start=1
                     /product="B-cell CLL/lymphoma 6 member B protein"
                     /protein_id="NP_001101749.1"
                     /db_xref="GeneID:360551"
                     /db_xref="RGD:1563179"
                     /translation="MGSTAAPEGALGYVREFTRHSSDVLSNLNELRLRGILTDVTLLV
                     GGQPLRAHKAVLIACSGFFYSIFRGRAGVGVDVLSLPGGPEARGFAPLLDFMYTSRLR
                     LSPATAPAVLAAATYLQMEHVVQACHRFIQASYEPLGISLRPMEAEPPRPPTVPPPGS
                     PRRSEGHPDPPTESRSCSQGSPSPASPDPKACNWKKYKFIVLNSQSSQAGSLAGESSG
                     QPCPQARLPSGDEACSSSSSSSSEEGATPGLQSRLSLATTTARFKCGALANNSYLFTP
                     PAQETSKQAHPPPGSECLSCQNCEAVAGCSSGIEPLAPGDEDKPYKCQLCRSAFRYKG
                     NLASHRTVHTGEKPYRCSVCGARFNRPANLKTHSRIHSGEKPYKCETCGSRFVQVAHL
                     RAHVLIHTGEKPYPCPTCGTRFRHLQTLKSHVRIHTGEKPYHCDPCGLHFRHKSQLRL
                     HLRQKHGAATNTKVRYHILGGP"
     exon            195..416
                     /gene="Bcl6b"
                     /gene_synonym="RGD1563179"
                     /inference="alignment:Splign:2.1.0"
     exon            417..770
                     /gene="Bcl6b"
                     /gene_synonym="RGD1563179"
                     /inference="alignment:Splign:2.1.0"
     exon            771..883
                     /gene="Bcl6b"
                     /gene_synonym="RGD1563179"
                     /inference="alignment:Splign:2.1.0"
     exon            884..1048
                     /gene="Bcl6b"
                     /gene_synonym="RGD1563179"
                     /inference="alignment:Splign:2.1.0"
     exon            1049..1179
                     /gene="Bcl6b"
                     /gene_synonym="RGD1563179"
                     /inference="alignment:Splign:2.1.0"
     exon            1180..1317
                     /gene="Bcl6b"
                     /gene_synonym="RGD1563179"
                     /inference="alignment:Splign:2.1.0"
     exon            1318..3338
                     /gene="Bcl6b"
                     /gene_synonym="RGD1563179"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caggcctggg tcgctatggg ttccacagcg gccccagagg gagctctggg ctacgtccga
       61 gagttcaccc gccactcctc cgacgtgctt agcaatctga atgagttgcg cctgcgcggg
      121 atcctcactg acgtcacgct gctggttggc gggcaacccc taagagcgca caaggcagtt
      181 cttattgctt gcagtggctt cttctattca attttccggg gccgagcggg agtcggagtg
      241 gatgtactct ctctgcctgg gggaccggaa gccagaggct tcgctcctct tctggacttc
      301 atgtatactt caaggcttcg cctttctcca gccactgcac cagctgtcct ggcagctgcc
      361 acctatttgc agatggaaca cgtagttcag gcatgtcacc gtttcatcca agccagctat
      421 gaacctctag gcatctccct gcgacccatg gaggcagaac ccccaagacc cccaacagtc
      481 cctccaccag gcagtcccag gcgctcagaa ggacacccgg acccacctac tgagtctcga
      541 agctgcagtc aaggttcccc aagtccagcc agcccagacc ctaaggcctg caactggaaa
      601 aaatacaaat ttattgtgct aaattctcag agctcacaag caggaagcct ggctggggag
      661 agttctggtc aaccttgccc ccaagccagg ctccctagtg gagatgaagc ctgcagcagc
      721 agcagcagca gcagcagcga agaaggagcc actcccggtc ttcagagcag actatcccta
      781 gccactacca ctgcacgatt taaatgtgga gctctagcga ataactccta cctcttcaca
      841 cccccggctc aagagacttc taagcaggct catccgccac caggaagtga gtgtttgagc
      901 tgccagaact gtgaggctgt ggctgggtgc tcatcgggta tcgagccctt agctccagga
      961 gatgaggaca agccctataa atgccagctg tgccgatctg ccttccgtta taagggcaac
     1021 ttggctagtc accgcacggt gcacacaggg gaaaagccct accgctgctc cgtctgcgga
     1081 gcacgtttta accgacctgc taacctaaaa acacacagcc gcatccattc tggagagaaa
     1141 ccgtacaagt gtgagacctg tggctcgcgt tttgttcagg tagcacacct acgcgcacac
     1201 gtgctcatcc acactggaga gaagccctat ccgtgtccca cctgcggaac ccgcttccgc
     1261 catctacaga ccctcaaaag ccacgttcgc atccacaccg gggagaagcc ataccactgt
     1321 gacccctgcg gcctgcattt tcggcacaag agtcaactac ggctgcatct gcgtcagaaa
     1381 cacggtgctg ctaccaacac taaagtgcgc taccacatcc tggggggacc ttagctgagt
     1441 ccccaccatc taaactccat tcgctcccta ggggctgtga aagctacagg cccaggcttg
     1501 gtttccttga tggtcttgat atagagtgtg ctgggccacc ctggtatcag aaactgctga
     1561 caccttaatc ttgtactgag ggagagcggg ggtggcagat cctggctaga tctgcctctg
     1621 ttttgctggt caaaacctct tcctcacaat ccagattggg tagctagtgg ctgggggaga
     1681 aaggagagac agacacaagg gacttgctct ctttatagga acttccccct ccatttcaaa
     1741 tggtttgtct gtaaatataa tttattgagg cctgtggttg gttccagggc ctttattctg
     1801 tttgcatttc tgactttctt cttctgtgtg atcaaaagag actggaaaca cagaaggcga
     1861 gggcaccact ctgctggcag agatactgag tgcctggctc tctcttttga cttgagcatc
     1921 atgcagtggc tctttggttt ggtttttttc cttttgtagc ttttctctct ggactcgttc
     1981 cttcttttcc tctctttgtt tgcctgtcag tttatccctc cagttctaga actggaacct
     2041 ttagttttcc tgggccaggc cctgagaaca tgtgaggttg ggtaaggagt cctctggtat
     2101 tttgtggtgc aagtcctgtg gcaggccata catggcaaga gaactctcag ctctttgagg
     2161 acgacgggaa ccttgttttg atgaactctg aatgtagata ataaattcct ccttctgaac
     2221 gctgggaagg tggggggctg gagtcctcct gcaagaaagc ccagcattaa cgattccatt
     2281 gatctatttg cctgggttca aatgtactat gctcatctat cagaccaagc ctgcctaagg
     2341 gtttgcactc accccacaat cctctgacca gggctgactt agtatctcat ggggagagac
     2401 ctataggacc ttttcttatc tcttatctgt ctggtttctg agactgctct gatgtagaga
     2461 gaattaatac cattccttga cgatgagtct gaggaatcct ttactgcacg gacagctggg
     2521 gttgattatg tcccctggga ctcaatatgc ccttcttctt tgaatgtttt tttttttctt
     2581 gttgttgttt tgtgttggga cagcttctgg caagtgtcct ctttcatggg tgcttggtag
     2641 ctttcttacc ttagaaaatc tgggtctgag actcagactg cccatcatta cattcctgtc
     2701 tgggaccggt gaatgtacta ggactttaca tgggaaggaa agggggggct gttttctacg
     2761 ctgcatttgt tgtcattggg aatgattgag ggaattacat acttcaaacc cttcaaaacc
     2821 tggctgatgg attggccaaa ggctccttcc acttgaacaa gttaccagaa gtgttacaag
     2881 gttggttgag ggctgcagtt tctggtgggg aacatgtaga taaagatgtt agggacggag
     2941 tgccatggtt agatggagtg tctgggatgt tagatagtat ttgggagcct tgatttacag
     3001 ttctgctctc gttgccttgg gacctatctg attatagtac ttgggtaaac ggtaaaagga
     3061 cttgaatttg tagggcagag actcctgaat taaggcagtt cttgtggcca gcagctgggg
     3121 acaggtgaga aagccatcca ttcttccagt tcccatttaa ctctcctacc acctgaatga
     3181 atgcagactt gtgtgtgggt tggggcaacg acaggggaga gattgagaag gtgatgattt
     3241 ctttttagca gactggacag gcacatggga agtgccgggg tgagaggtta gattctgcaa
     3301 gatcagatcc ttggaataaa gaagccctac tttgtgcc
//
