LOCUS       NM_001398849            3036 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus Bcl2-like 13 (Bcl2l13), mRNA.
ACCESSION   NM_001398849 XM_006237248
VERSION     NM_001398849.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Jiang,D., Sun,X., Wang,S. and Man,H.
  TITLE     Upregulation of miR-874-3p decreases cerebral ischemia/reperfusion
            injury by directly targeting BMF and BCL2L13
  JOURNAL   Biomed Pharmacother 117, 108941 (2019)
   PUBMED   31200256
  REMARK    GeneRIF: miR-874-3p attenuated ischemic injury by negatively
            regulating BMF and BCL2L13.
REFERENCE   3  (bases 1 to 3036)
  AUTHORS   Kataoka,T., Holler,N., Micheau,O., Martinon,F., Tinel,A.,
            Hofmann,K. and Tschopp,J.
  TITLE     Bcl-rambo, a novel Bcl-2 homologue that induces apoptosis via its
            unique C-terminal extension
  JOURNAL   J Biol Chem 276 (22), 19548-19554 (2001)
   PUBMED   11262395
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Dec 27, 2021 this sequence version replaced XM_006237248.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.1063513.1,
                                           SRR26360190.547910.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-150               JAXUCZ010000004.1  155728297-155728446
            151-320             JAXUCZ010000004.1  155739031-155739200
            321-428             JAXUCZ010000004.1  155752555-155752662
            429-585             JAXUCZ010000004.1  155754704-155754860
            586-655             JAXUCZ010000004.1  155758979-155759048
            656-799             JAXUCZ010000004.1  155764081-155764224
            800-3036            JAXUCZ010000004.1  155778917-155781153
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..3036
                     /gene="Bcl2l13"
                     /note="Bcl2-like 13"
                     /db_xref="GeneID:312682"
                     /db_xref="RGD:1306985"
     exon            1..150
                     /gene="Bcl2l13"
                     /inference="alignment:Splign:2.1.0"
     exon            151..320
                     /gene="Bcl2l13"
                     /inference="alignment:Splign:2.1.0"
     CDS             200..1504
                     /gene="Bcl2l13"
                     /note="BCL2-like 13 (apoptosis facilitator)"
                     /codon_start=1
                     /product="bcl-2-like protein 13"
                     /protein_id="NP_001385778.1"
                     /db_xref="GeneID:312682"
                     /db_xref="RGD:1306985"
                     /translation="MASSSSSTTVPLGFHYETKYVVLSYLGLLSQEKQQGPSPQGSQL
                     DVAPQSLNPEVLLKIKSEIEEELKSLDKEVSEAFTSTGFDCHTSPVFSPANPESSVED
                     CLAQLGERVSRDLSEPLQKALQMILSQPVTYEAYRECTVETAVHASGWNKILVPLVLL
                     QQMLLELARRGQEPLSTLLQFGVMYLEEHGAEFIIQQGGWGTVFSLESEEEEFPGIIA
                     EDSNDIYILPSDNSGQVSPPESPTVTTSWQSESLPVSLSASQSWHTESLPVSLGPESW
                     QQIAMDPEEVKSLDSSGAGEKSENNSSNSDIVHVEKEEVPEEAFPGATGPLLPQVTPM
                     EASEMMRVEKTSPTPSVFVELGEEDLEVVTVRPDAVEGAAQLSEERSGRRRKSHTGEA
                     IAARGTKSGLPAEGKAVLLFGGAAAVALLAVAVGVALALRKK"
     exon            321..428
                     /gene="Bcl2l13"
                     /inference="alignment:Splign:2.1.0"
     exon            429..585
                     /gene="Bcl2l13"
                     /inference="alignment:Splign:2.1.0"
     exon            586..655
                     /gene="Bcl2l13"
                     /inference="alignment:Splign:2.1.0"
     exon            656..799
                     /gene="Bcl2l13"
                     /inference="alignment:Splign:2.1.0"
     exon            800..3036
                     /gene="Bcl2l13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgcgtcagg gtgacctcac cgtccaacat ggcggcggcg gtagattagg tctgcgggtc
       61 gaaccagcca ccgctgctcc tgtaccctgt gggaagcacc tgctgccacc gccgtctcct
      121 tcgtcccttc tactgcaggg ccggagccag atttccaaca tccctaatag acctccttgg
      181 agctccttca gccaagtcaa tggcgtcctc ctcatcctct acgactgtgc ctctaggatt
      241 ccactatgaa acaaaatatg ttgttctcag ctacttggga cttctctctc aggagaaaca
      301 acaaggtccc tcaccccaag gaagtcaact agatgtcgct ccacagtctc tgaatccaga
      361 agttttatta aaaattaaat ctgagattga ggaagaactg aaatccttgg acaaagaagt
      421 ctctgaagcc ttcaccagca caggctttga ctgtcacacc tcaccagtgt tcagccctgc
      481 taaccctgaa agctccgtag aggactgctt ggcccagctt ggagagagag tgtcccgaga
      541 cctgagcgaa cctttgcaga aagcgctgca gatgatcctc agccagccag tgacatatga
      601 ggcataccgt gaatgtacag tggagaccgc agtccacgcc agcggatgga ataagatttt
      661 ggtgcctcta gttttgctac aacaaatgct tttggaattg gcacggcgtg gtcaagagcc
      721 tttgagtacg ctgctacagt ttggtgtgat gtatctggag gagcacggag cagagttcat
      781 cattcagcaa ggtggctggg gcaccgtctt tagtcttgag tctgaggagg aggaattccc
      841 tggaatcatt gcagaagata gcaatgacat ttatatactg cccagtgaca actccggaca
      901 agttagtccc cctgagtctc ccacagtgac aacgtcttgg cagtcagaga gcctgcctgt
      961 ctcactgtct gccagccaga gctggcacac agaaagcctc ccggtgtccc tcgggcctga
     1021 gtcctggcag cagattgcaa tggatcctga agaagtgaag agcctagata gcagcggggc
     1081 tggagagaag agtgagaaca attcctctaa ctctgacatc gtgcatgtgg agaaggagga
     1141 ggtaccagag gaggccttcc cgggagccac tggtcccttg ctcccacagg tcactcccat
     1201 ggaagcctca gaaatgatga gagttgagaa aaccagcccc acgccatctg tgtttgtgga
     1261 gcttggtgag gaagatctgg aagttgtaac agtgagaccc gatgctgtgg aaggggccgc
     1321 tcagctgagc gaggagagat ctgggaggag gagaaagagc cacactgggg aggccatcgc
     1381 tgccaggggg acaaagagtg gcctgcctgc tgagggcaag gctgtactgc tctttggagg
     1441 ggccgctgcg gtggctctct tggctgtggc agttggagtt gcactggctt taaggaagaa
     1501 gtaacagtcc gttcagacga gagacaagac ggacagacct gcggctttag ttgtattcac
     1561 cgggacttag actgccagca actgactgga cgttacagga cactggggga gttagacttc
     1621 ctgttcagcg tggcaatggc ttgagacagt gttcacattg gcctggttgt cattttaagg
     1681 gccttggctc atgctagatt cagaagggca agagagaagt tcccatctac aacaggttag
     1741 tgaacttggc accgttggcc tttcagtaat tctgtgtagg aggccgccct gtgcattacg
     1801 taatgatcgg caacatccct gccttctacc cactagatgc cactggaccc cactcatggt
     1861 gacggtagcc aaaaatgtct cctacattgc caaatgtccc ctgtggacaa agtcatctcc
     1921 cttttgaggg ccactgcttt aagggatagg gttcaattag gagaatcggg gaggaacctg
     1981 cagctgggat ggccagctgt tcatcctgtt gcggtttctc aggacagtga gctgactgtg
     2041 ctgtgcagct gtttttttct ggtccccatt ctgtagcgtg aggtgctctc ccaccgcact
     2101 gccatctgcg tgagcagcgc agtgtctcac cctgtacttc tttcacactc aacttcctga
     2161 agctccccac ggctccgtct ttcaaagatc cttcagggac ctgttaattg ataaataccc
     2221 agtccaggtg tggtggcatc tgcctgtagt cccagcattt atgaagcaga gacagagatg
     2281 aacccaagtt caaagctagc ctagtacaca ctgtcccaag aaaaggataa ctgcactgac
     2341 gctctgtagg agactgaggg ttcccagcct gattgccagg gcagagtaca ggctgcagtc
     2401 attggtctta gaagcaggaa ggtggtcagc gtgacccggc gaggtctatt tgagctctta
     2461 caggtatagc cagccatccc acgtgcttct gataagtctg ataagggaca cctctgatgg
     2521 catacatgcc atctagaacc ctggagtagt gttcttgggt gttggactgt catcagcttc
     2581 tctgtgggtc tctgcatgta ggaatctgtc atcctttggc ttacagaacc aattgggtca
     2641 taatccttac tcagtgtaaa tcactgaaat aaatgataaa gctttatcat ttattattag
     2701 gtatcactta aatttaagac caagactgat gctgaggttc tggtttaatc tttagcattg
     2761 aagagacttc ttggcctgag ttcagcgcag caccagggcc acagacgcag agggacccag
     2821 gcactcactg tagctagtgg gactcggcag tcgcgtatca cctggctgac cccatccctc
     2881 aaggaaggtg ggactgtctt tctcttgccg gagggcacag tgccaccctg caaggcacac
     2941 atgcttgata agaagtcatc tcagatttat cttagtcatg taacattact tcttagatcc
     3001 tgaagtttat aataaaagta cttttatcta ctctaa
//
