LOCUS       NM_001108751            1254 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus BCDIN3 domain containing RNA methyltransferase
            (Bcdin3d), mRNA.
ACCESSION   NM_001108751 XM_001063816 XM_343331
VERSION     NM_001108751.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Liu,Y., Martinez,A., Yamashita,S. and Tomita,K.
  TITLE     Crystal structure of human cytoplasmic tRNAHis-specific
            5'-monomethylphosphate capping enzyme
  JOURNAL   Nucleic Acids Res 48 (3), 1572-1582 (2020)
   PUBMED   31919512
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Martinez,A., Yamashita,S., Nagaike,T., Sakaguchi,Y., Suzuki,T. and
            Tomita,K.
  TITLE     Human BCDIN3D monomethylates cytoplasmic histidine transfer RNA
  JOURNAL   Nucleic Acids Res 45 (9), 5423-5436 (2017)
   PUBMED   28119416
REFERENCE   3  (bases 1 to 1254)
  AUTHORS   Xhemalce,B., Robson,S.C. and Kouzarides,T.
  TITLE     Human RNA methyltransferase BCDIN3D regulates microRNA processing
  JOURNAL   Cell 151 (2), 278-288 (2012)
   PUBMED   23063121
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474035.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_343331.3, XM_001063816.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CO568830.1, BP500554.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..1254
                     /gene="Bcdin3d"
                     /gene_synonym="RGD1306433"
                     /note="BCDIN3 domain containing RNA methyltransferase"
                     /db_xref="GeneID:363001"
                     /db_xref="RGD:1306433"
     exon            1..275
                     /gene="Bcdin3d"
                     /gene_synonym="RGD1306433"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..896
                     /gene="Bcdin3d"
                     /gene_synonym="RGD1306433"
                     /EC_number="2.1.1.-"
                     /note="probable methyltransferase BCDIN3D; BCDIN3
                     domain-containing protein; pre-miRNA 5'-monophosphate
                     methyltransferase; BCDIN3 domain containing RNA
                     methyltransfease"
                     /codon_start=1
                     /product="RNA 5'-monophosphate methyltransferase"
                     /protein_id="NP_001102221.1"
                     /db_xref="GeneID:363001"
                     /db_xref="RGD:1306433"
                     /translation="MAATQELSKGGVEEAVEEDDPAALKPGAAPFGNFPHYSRFHPPE
                     QRLRLLPPELLRQLFPPEGPERRPILGLDVGCNSGDLSMALYKHFLSPHDGETSSGTS
                     RELRLLCCDIDPVLVERAENGCRFPDALTFITLDIMDQESRKVPLSSFLSQFGRSVFD
                     IVFCMSVTMWIHLNHGDRGLCEFLAHVSSLCSYLLVEPQPWKCYRAAARRLRKLGLHN
                     FDHFRSLAIRGDMASQIVRILTQDHGMELACCFGNTSWDRSLLLFRAKHTEETQAIPE
                     SSTKETGTD"
     exon            276..1254
                     /gene="Bcdin3d"
                     /gene_synonym="RGD1306433"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agacttccgg ttccgctccg acccggggac cgagggtgat ggcggcaacc caggaattgt
       61 ccaaaggggg cgttgaagag gctgtggagg aagacgaccc ggcagctttg aagcctgggg
      121 ccgcgccgtt cggaaatttc cctcattatt cccgcttcca ccctcccgag caaaggctcc
      181 gccttctgcc cccggagctt cttcgacagc tcttccctcc cgagggtccc gagaggaggc
      241 cgatcctagg gctcgacgtg gggtgtaact ccggggatct gagcatggct ctgtataaac
      301 atttcctttc cccgcatgat ggggagacca gctccggcac ttccagagaa ctccgcctcc
      361 tctgctgtga tatagatcca gtccttgtgg agcgggctga aaatggctgt cgctttcctg
      421 atgccttgac ctttatcacc ctggacatca tggatcaaga gagcaggaag gttcccttga
      481 gttctttctt aagccagttt gggcgttccg tttttgacat tgtcttctgc atgtcagtaa
      541 ccatgtggat tcacctgaac catggagacc gtggtctgtg cgagttcctg gcccacgtct
      601 cctctctctg cagctacctc ctcgtggagc cacagccctg gaagtgttac cgggcagccg
      661 caagacgcct acgcaagctg ggactccaca attttgatca cttccgctcc ctggccatcc
      721 gaggtgacat ggccagccag atcgtgcgaa tcttgacgca ggaccacggg atggagttag
      781 catgctgttt tggcaacacc agttgggacc gaagccttct tctcttcaga gcaaagcaca
      841 ccgaggagac tcaggcaatc cctgaatcgt caaccaaaga gacagggacg gattaagata
      901 gtgaaggcag tgggacagac cagtaaagag agactggagc ttctataccg agactcgagt
      961 ttgcgtccct gagatctggc aggagcgttg ggcaaagtgt ccgaagcaag cagctgaaag
     1021 gcactgtctg tgtcccgggt tgcttggacc gtgctgggaa tgagttcata gaactgcggg
     1081 ctcgaggcag ctggatagat tgtggtcccc taggaatgaa actgctctcg gaagtggttt
     1141 tgtttcctga ggatccttaa ggtattgggt gtgctcggca gcgagtctat gacgaacctc
     1201 atctctagct caaaggggtt atttattaaa aaagaaacag aaaaaaaaaa aaaa
//
