LOCUS       NM_001006980            1767 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus B-cell receptor-associated protein 29 (Bcap29),
            mRNA.
ACCESSION   NM_001006980 XM_216681
VERSION     NM_001006980.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Foster LJ, Zeemann PA, Li C, Mann M, Jensen ON and Kassem M.
  TITLE     Differential expression profiling of membrane proteins by
            quantitative proteomics in a human mesenchymal stem cell line
            undergoing osteoblast differentiation
  JOURNAL   Stem Cells 23 (9), 1367-1377 (2005)
   PUBMED   16210410
REFERENCE   3  (bases 1 to 1767)
  AUTHORS   Paquet ME, Cohen-Doyle M, Shore GC and Williams DB.
  TITLE     Bap29/31 influences the intracellular traffic of MHC class I
            molecules
  JOURNAL   J Immunol 172 (12), 7548-7555 (2004)
   PUBMED   15187134
REFERENCE   4  (bases 1 to 1767)
  AUTHORS   Schamel WW, Kuppig S, Becker B, Gimborn K, Hauri HP and Reth M.
  TITLE     A high-molecular-weight complex of membrane proteins BAP29/BAP31 is
            involved in the retention of membrane-bound IgD in the endoplasmic
            reticulum
  JOURNAL   Proc Natl Acad Sci U S A 100 (17), 9861-9866 (2003)
   PUBMED   12886015
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083576.1.
            
            On Nov 22, 2004 this sequence version replaced XM_216681.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083576.1, SRR8487226.39226.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q16"
     gene            1..1767
                     /gene="Bcap29"
                     /note="B-cell receptor-associated protein 29"
                     /db_xref="GeneID:298943"
                     /db_xref="RGD:1359431"
     exon            1..11
                     /gene="Bcap29"
                     /inference="alignment:Splign:2.1.0"
     exon            12..121
                     /gene="Bcap29"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..755
                     /gene="Bcap29"
                     /note="B-cell receptor-associated protein BAP29"
                     /codon_start=1
                     /product="B-cell receptor-associated protein 29"
                     /protein_id="NP_001006981.1"
                     /db_xref="GeneID:298943"
                     /db_xref="RGD:1359431"
                     /translation="MTIQWAAVASFLYAEIGLILIFCLPFISPQRWHKIFSFSVWTKI
                     ASFWNKAFLTIIILLVVLFLDAVREVKKYSSINVVEKNSASRPAAYEQAQMRLFRSQR
                     NLYISGFSLFFWLVLRRLVTLITQLAKEITNKGVLKIQAENTNKAAKKFMEENERLKL
                     VLKNNDNTEEHVLETENKKLVEDKERLKTELKKASDALFKAQNDVMTMKIQSERLSKE
                     YDRLLKEHSELQNRLEKENKKGL"
     exon            122..222
                     /gene="Bcap29"
                     /inference="alignment:Splign:2.1.0"
     exon            223..373
                     /gene="Bcap29"
                     /inference="alignment:Splign:2.1.0"
     exon            374..509
                     /gene="Bcap29"
                     /inference="alignment:Splign:2.1.0"
     exon            510..618
                     /gene="Bcap29"
                     /inference="alignment:Splign:2.1.0"
     exon            619..719
                     /gene="Bcap29"
                     /inference="alignment:Splign:2.1.0"
     exon            720..1733
                     /gene="Bcap29"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atcggcggcg ggtgtgaaga aaacaaacca tgacaatcca atgggcggcg gttgccagct
       61 ttctttatgc cgaaatagga ctcattttaa tcttctgttt gccctttatt tctcctcaga
      121 gatggcacaa gattttttcc tttagtgtct ggaccaagat cgccagcttc tggaacaaag
      181 cctttcttac cattataatt ctattggtcg ttctgtttct agatgccgtg agagaagtaa
      241 agaagtattc ctccataaat gtcgttgaga agaactcagc cagcagacct gctgcctatg
      301 agcaggcaca gatgaggctc ttcaggtctc aaagaaatct ttatatttct ggattctcgt
      361 tatttttttg gctagtgttg agacgtctgg ttacgcttat tactcagctg gcaaaagaaa
      421 taacaaacaa aggagtgctt aaaattcaag cagaaaatac caataaggct gccaagaaat
      481 tcatggaaga gaatgaaaga ctaaaattgg tgctaaaaaa taatgacaac actgaagaac
      541 acgttttgga aactgaaaat aaaaagctag tagaggacaa ggagagactg aaaactgagc
      601 tgaagaaggc ttccgatgcc ctttttaagg cccaaaatga tgtgatgacc atgaagattc
      661 agtcggagag actttctaaa gaatatgacc gactcctgaa agagcactca gaacttcaga
      721 accgtttaga aaaagaaaac aagaaaggcc tgtgaagtaa ctttacaaaa gaagattgtg
      781 atatgccttg tcaaaatttg gttaaacaaa acagctttgt tagcttctgc agacacacat
      841 aggctataga gtagtgacat taccaaaata tttgaaaatg tttcagatat aaaatatgta
      901 tttcagctct tttggaaaat ataagcatgt taaataccat atttacatat tgctaatagc
      961 attggtatat ggtggctctt tacccataaa aggaaaaatt catttgccag catttacttc
     1021 ccaaattaga tctgaagttg catgaaacca ttattagctt tgaaagcttt gatgagtttt
     1081 tagtaataag cagataatgg tggtggtaaa aatgatgtgt ttgaaaatag tactcagtat
     1141 cagaaactat gttcacaggg aaataaggat aaataatcac aattagcctc tgtgctgata
     1201 gagaagagtc agagaagagt ggaaactatg gccttagggc tttttaagcc taatgatttt
     1261 accatttact ctacatacga cagcagcact gttgacagtg tgttttgaga ctgcacttct
     1321 gtgcctatta gactattgat atttgtttag tcatatctaa ccagtagtct atcttttcaa
     1381 gctcatctgc taatagaaag tatgccattt gcaaaactgt cacgacactg agttgaacct
     1441 atgttgcact gtggagttct ccacttacac agcctattta tgacatccaa aagcagtgtt
     1501 ttttatattt gtgaaagtta ctggttttac tggtattacc tcagtataca tgcactggta
     1561 tcatacaaat ctctctacta tgtttctata ttctcaaagt taaataccgg ttttcatgca
     1621 aatattcatg taaaagtagt gattgtaata atatgatgta ggttatttca ttgtttaact
     1681 gtgaaaagcc acttgtctta aaatgcatac atataaaaga aaatgtaaaa taaaaaaaaa
     1741 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
