LOCUS       NM_001399481             613 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus bublin coiled coil protein (Bbln), mRNA.
ACCESSION   NM_001399481 XM_575113
VERSION     NM_001399481.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Jan 10, 2022 this sequence version replaced XM_575113.8.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ223026.1, BM387022.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840105, SAMN12840110
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-171               JAXUCZ010000003.1  36074900-36075070   c
            172-613             JAXUCZ010000003.1  36072325-36072766   c
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p12"
     gene            1..613
                     /gene="Bbln"
                     /gene_synonym="RGD1561113"
                     /note="bublin coiled coil protein"
                     /db_xref="GeneID:499780"
                     /db_xref="RGD:1561113"
     exon            1..171
                     /gene="Bbln"
                     /gene_synonym="RGD1561113"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..344
                     /gene="Bbln"
                     /gene_synonym="RGD1561113"
                     /note="UPF0184 protein C9orf16 homolog"
                     /codon_start=1
                     /product="bublin coiled-coil protein"
                     /protein_id="NP_001386410.1"
                     /db_xref="GeneID:499780"
                     /db_xref="RGD:1561113"
                     /translation="MSGPNGDLGMPVDAGTEGENDSFGEAEYAAINSMLDQINSCLDH
                     LEEKNDHLHARLQELLESNRQTRLEFQQQLGEAPGDASP"
     exon            172..613
                     /gene="Bbln"
                     /gene_synonym="RGD1561113"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagctgcttg caccttccgc ccagcgccgg ctttccgcgc gacgatcgcc gagttccatc
       61 ttcgcgtggc ctctgcggcg cccgagcccg caatgtcggg ccccaacggg gacctaggca
      121 tgccggtgga tgcgggcacg gaaggcgaga atgacagctt cggggaagca gagtatgctg
      181 ccatcaactc catgttggat cagatcaact cttgtctgga ccacctggag gagaagaacg
      241 accacctcca tgcccgcctc caggagctgc tggagtccaa tcggcagaca cgcctggaat
      301 tccagcaaca gcttggggag gcccctggtg atgccagccc ctaggtgccg ggagccccca
      361 accaggcccc acccttacct ctctaggcca tgttctggcc tggctagata ctacttggct
      421 tagacaccat ctcaggtact ggcctccaga tcccctggtg ggtctaccag cctggaccag
      481 tccccactca ctgcccatca ctcttcctgg agtcaggtgc agtcctacag ttcacccact
      541 tgtctgcctt cccagctcct ggtctctctc ccctccaccc agattgagtg tcatattaaa
      601 gaggtctccc aca
//
