LOCUS       NM_001401715             803 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus BBSome interacting protein 1 (Bbip1), mRNA.
ACCESSION   NM_001401715 XM_017590389
VERSION     NM_001401715.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Loktev,A.V. and Jackson,P.K.
  TITLE     Neuropeptide Y family receptors traffic via the Bardet-Biedl
            syndrome pathway to signal in neuronal primary cilia
  JOURNAL   Cell Rep 5 (5), 1316-1329 (2013)
   PUBMED   24316073
REFERENCE   2  (bases 1 to 803)
  AUTHORS   Loktev,A.V., Zhang,Q., Beck,J.S., Searby,C.C., Scheetz,T.E.,
            Bazan,J.F., Slusarski,D.C., Sheffield,V.C., Jackson,P.K. and
            Nachury,M.V.
  TITLE     A BBSome subunit links ciliogenesis, microtubule stability, and
            acetylation
  JOURNAL   Dev Cell 15 (6), 854-865 (2008)
   PUBMED   19081074
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 22, 2022 this sequence version replaced XM_017590389.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM122608.1, SRR26360172.804782.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMEA5760434 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-72                JAXUCZ010000001.1  262964339-262964410 c
            73-166              JAXUCZ010000001.1  262963685-262963778 c
            167-243             JAXUCZ010000001.1  262951692-262951768 c
            244-803             JAXUCZ010000001.1  262950459-262951018 c
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q55"
     gene            1..803
                     /gene="Bbip1"
                     /note="BBSome interacting protein 1"
                     /db_xref="GeneID:100910342"
                     /db_xref="RGD:6498801"
     exon            1..72
                     /gene="Bbip1"
                     /inference="alignment:Splign:2.1.0"
     exon            73..166
                     /gene="Bbip1"
                     /inference="alignment:Splign:2.1.0"
     exon            167..243
                     /gene="Bbip1"
                     /inference="alignment:Splign:2.1.0"
     CDS             198..410
                     /gene="Bbip1"
                     /note="BBSome-interacting protein 1-like"
                     /codon_start=1
                     /product="BBSome-interacting protein 1"
                     /protein_id="NP_001388644.1"
                     /db_xref="GeneID:100910342"
                     /db_xref="RGD:6498801"
                     /translation="MAEVKSMFREVLPKQGQLSVEDVTTMVLCKPKLLPLKSLTLERL
                     EKMQQTAQDTVRQQEMAEKDNRQITH"
     exon            244..803
                     /gene="Bbip1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccaggaggt gggagtagtc gccccagcct gcgccccagg ggatacctcc tcttccagag
       61 ttgaagagtg agttccttct gtgggcattt tgagtcaaga agtcaaccgt tctgataact
      121 acagatcaga ttcctaaagc tgcaagaaaa agataacaat tttcaggagc gaaagcactg
      181 tacccagcag tttacagatg gcagaagtga agtcgatgtt ccgagaagtc cttccaaaac
      241 aagggcagtt gtctgtggaa gatgtaacca caatggtgct gtgtaaaccc aagcttttac
      301 ccttaaaatc tctgactttg gaaagactgg agaaaatgca gcaaacagca caggacacag
      361 ttcgccaaca agaaatggca gaaaaagaca accggcaaat aacccactag ccactcccgc
      421 tttaaagaat ccctaactgt tcagtgacta gaactattct gcatctgtag gctaaggaat
      481 cctaactgtt cagtgactag aactattctg catctgttca gtgactagag actattctgc
      541 atccgtaggc taaaaatgct taaactggtc attccaaact taaaacagaa aattcaggtg
      601 tttaaacatt ggtttgtgtt aagagaaaaa ctttgaacca ggttttacgg aattttcaaa
      661 gtttttaaat tataaatttc tcaccttgtt tatcgcacct attgttagga gtgtaagaaa
      721 ttaaatgcgt cttttgtgga tgaaggattt ctttatgttt attaaacacc tgaatctgaa
      781 aataaactct tactgtgaac ata
//
