LOCUS       XM_039080909            2194 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Bcl-2 binding component 3 (Bbc3),
            transcript variant X1, mRNA.
ACCESSION   XM_039080909
VERSION     XM_039080909.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2194
                     /gene="Bbc3"
                     /gene_synonym="Puma"
                     /note="Bcl-2 binding component 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 3 ESTs, 2 long SRA reads, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 40 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:317673"
                     /db_xref="RGD:631434"
     CDS             650..1231
                     /gene="Bbc3"
                     /gene_synonym="Puma"
                     /codon_start=1
                     /product="bcl-2-binding component 3 isoform X1"
                     /protein_id="XP_038936837.1"
                     /db_xref="GeneID:317673"
                     /db_xref="RGD:631434"
                     /translation="MARARQEGSSPEPVEGLARDSPRPFPLGRLMPSAVSCGLCEPGL
                     PAAPAAPALLPAAYLCAPTAPPAVTAALGGPRWPGGHRSRPRGPRPDGPQPSLSPAQQ
                     HLESPVPSAPEALAGGPTQAAPGVRVEEEEWAREIGAQLRRMADDLNAQYERRRQEEQ
                     HRHRPSPWRVMYNLFMGLLPLPRDPGAPEMEPN"
ORIGIN      
        1 tgccaggagc tcagggccgc ctcctcccca cgtgtccagt gccagattgc tattacacag
       61 ggccaggtat tcatgttcac gagtgtctcc caccatcgag ccatttagcg ggaagctgtt
      121 ccaggagtgc ctttgtgagc acaggtctgg gctgtcccca cggtgctcct cctgccccaa
      181 ccaggcctcg ccccgcccct ctggctgccg ggaaaccccc cgcgcggagg tagggggcgc
      241 ggcgcccgcc tgcaagcccc gacttgtccc cggccgcggg cggggccctg gcgtcacgcg
      301 ggggcggggc gtgggagcca gagagagaga gaggcggagc ggggcggggc gggagcgagc
      361 ggggcccggg gatctgccgg gaggcctgag acgaggctcg gagccacatg cgagcggggc
      421 gcccaggaga cggcggcgac accagcgagc aatctgcagc ggtgatccgg acgcagacac
      481 gaacgcacca gaagcagcag cagcagccac tgcagtcaga gcagcaacaa cagcaaggag
      541 cctcggtagc aagccagtcg gcgggcgagc cctccagaag gcagccgccc gccaccccat
      601 cgcctccttc ctccggcgtg ttcatgcccc cggggctcca gggagcgcca tggcccgcgc
      661 acgccaggag ggcagctctc cggagcccgt agagggccta gcccgcgaca gcccgcgtcc
      721 tttcccgctc ggccgcctga tgccctccgc tgtatcctgc ggcctctgcg agcccggcct
      781 gcccgctgcc cctgctgccc ctgccttgct gccggccgcc tacctctgcg cccccaccgc
      841 cccgcctgcc gtcaccgccg ccctgggggg cccccgctgg cctgggggtc accgcagccg
      901 gccccgaggc ccgcgcccgg acggtcctca gccctcgctg tcaccagccc agcagcacct
      961 agagtcgccc gtgcccagcg ccccggaggc cctggcggga ggccccaccc aagctgcccc
     1021 gggagtgcgt gtggaggagg aggagtgggc ccgggagatc ggggcccagc tgcggaggat
     1081 ggcggacgac ctcaacgcgc agtacgagcg gcggagacaa gaagagcaac atcgacaccg
     1141 accctcgccc tggagggtca tgtataatct cttcatggga ctcctcccct tacccaggga
     1201 tcctggagcc ccagaaatgg agcccaacta ggtgcctaca cccgtcccgg gggacgtcgg
     1261 agacttgagg ggcaggaccc cctccgcctt ctgacaccct ggccagcgcg ggggactttt
     1321 tctgcaccat gtagcatact ggactgccag ccttgcttgt cccaggggca ggcaagggaa
     1381 gccactcgag ccccggcagc ctgggtgcac tgatggagat acggacttgg gggaccctgg
     1441 cctcccaaaa gccagggaag ggagggctga aggactcatg gtgaccgagg gggtggggac
     1501 cgagccgccc gcctctgccg cccaccacca tctcaggaaa ggctgctggt gctggctgcc
     1561 cgttccagct gcaggggggg ctctgggggt gtccccagtg cgccttcact ttgggcctgg
     1621 cctcaggccc ctggtgcttc cccccctcct cctgaggagg gggcctgtga agagcatatg
     1681 agccaaacct gaccactagc ctcctggagc cagagaatgg ggggcatgtg aaagccttct
     1741 caacccagtg cccagccatc ttccctgagc cgccggcggg cggtgagcaa tgcctgcctc
     1801 accttcatct gggggtgtcc aggaggggtc cagactgtga atcctgtgct ctggccggga
     1861 ccactccccc agtccccatc catcccattg cataggttta gagagagcac gtgtgaccac
     1921 tggcattcat ttggggggtg ggagatattg gcggaagcca ccccagcctt agtccccagg
     1981 gcaaagcgct ggggaggaag atggggagtc agggaggggg gaagtctcag aagagggagg
     2041 agtctgggag cggggaggga cggcccagcc tgtaaaatac tgtacatgca ctgctgtaga
     2101 tatactggaa tgaattttct gtacatgttt ggttaatttt ttttgtacat gatttttgta
     2161 tgtttccttt tcaataaaat cagattgaac agtg
//
