LOCUS       NM_001191916            6387 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus bromodomain adjacent to zinc finger domain, 1B
            (Baz1b), mRNA.
ACCESSION   NM_001191916 XM_347166
VERSION     NM_001191916.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6387)
  AUTHORS   Panier,S. and Durocher,D.
  TITLE     Push back to respond better: regulatory inhibition of the DNA
            double-strand break response
  JOURNAL   Nat Rev Mol Cell Biol 14 (10), 661-672 (2013)
   PUBMED   24002223
  REMARK    Review article
REFERENCE   2  (bases 1 to 6387)
  AUTHORS   Hargreaves,D.C. and Crabtree,G.R.
  TITLE     ATP-dependent chromatin remodeling: genetics, genomics and
            mechanisms
  JOURNAL   Cell Res 21 (3), 396-420 (2011)
   PUBMED   21358755
  REMARK    Review article
REFERENCE   3  (bases 1 to 6387)
  AUTHORS   Xiao,A., Li,H., Shechter,D., Ahn,S.H., Fabrizio,L.A.,
            Erdjument-Bromage,H., Ishibe-Murakami,S., Wang,B., Tempst,P.,
            Hofmann,K., Patel,D.J., Elledge,S.J. and Allis,C.D.
  TITLE     WSTF regulates the H2A.X DNA damage response via a novel tyrosine
            kinase activity
  JOURNAL   Nature 457 (7225), 57-62 (2009)
   PUBMED   19092802
REFERENCE   4  (bases 1 to 6387)
  AUTHORS   Poot,R.A., Bozhenok,L., van den Berg,D.L., Steffensen,S.,
            Ferreira,F., Grimaldi,M., Gilbert,N., Ferreira,J. and
            Varga-Weisz,P.D.
  TITLE     The Williams syndrome transcription factor interacts with PCNA to
            target chromatin remodelling by ISWI to replication foci
  JOURNAL   Nat Cell Biol 6 (12), 1236-1244 (2004)
   PUBMED   15543136
REFERENCE   5  (bases 1 to 6387)
  AUTHORS   Bozhenok,L., Wade,P.A. and Varga-Weisz,P.
  TITLE     WSTF-ISWI chromatin remodeling complex targets heterochromatic
            replication foci
  JOURNAL   EMBO J 21 (9), 2231-2241 (2002)
   PUBMED   11980720
  REMARK    Erratum:[EMBO J 2002 Jun 17;21(12):3212]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Jul 17, 2010 this sequence version replaced XM_347166.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760386
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-394               JAXUCZ010000012.1  27126118-27126511   c
            395-511             JAXUCZ010000012.1  27117619-27117735   c
            512-656             JAXUCZ010000012.1  27114219-27114363   c
            657-855             JAXUCZ010000012.1  27108016-27108214   c
            856-977             JAXUCZ010000012.1  27104221-27104342   c
            978-1175            JAXUCZ010000012.1  27103069-27103266   c
            1176-2874           JAXUCZ010000012.1  27095523-27097221   c
            2875-3013           JAXUCZ010000012.1  27091888-27092026   c
            3014-3147           JAXUCZ010000012.1  27090885-27091018   c
            3148-3250           JAXUCZ010000012.1  27088147-27088249   c
            3251-3349           JAXUCZ010000012.1  27086447-27086545   c
            3350-3527           JAXUCZ010000012.1  27084631-27084808   c
            3528-3710           JAXUCZ010000012.1  27082672-27082854   c
            3711-3858           JAXUCZ010000012.1  27078194-27078341   c
            3859-4006           JAXUCZ010000012.1  27076259-27076406   c
            4007-4125           JAXUCZ010000012.1  27074098-27074216   c
            4126-4256           JAXUCZ010000012.1  27071814-27071944   c
            4257-4360           JAXUCZ010000012.1  27070754-27070857   c
            4361-6387           JAXUCZ010000012.1  27068541-27070567   c
FEATURES             Location/Qualifiers
     source          1..6387
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q12"
     gene            1..6387
                     /gene="Baz1b"
                     /note="bromodomain adjacent to zinc finger domain, 1B"
                     /db_xref="GeneID:368002"
                     /db_xref="RGD:1597089"
     exon            1..394
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     CDS             288..4718
                     /gene="Baz1b"
                     /EC_number="2.7.10.2"
                     /note="bromodomain adjacent to zinc finger domain protein
                     1B"
                     /codon_start=1
                     /product="tyrosine-protein kinase BAZ1B"
                     /protein_id="NP_001178845.1"
                     /db_xref="GeneID:368002"
                     /db_xref="RGD:1597089"
                     /translation="MAPLLGRKPFPLVKPLPGEEPLFTIPHTQEAFRTREEYEARLER
                     YSERIWTCKSTGSSQLTHKEAWEEEQEVAELLKEEFPNWYEKLVLEMVHHNTASLEKL
                     VDSAWLEIMTKYAVGEECDFEVGKEKMLKVKIVKIHPLEKVDEEAAEKKSDGTCDSPS
                     SDKENSSQMAQDHQKETVVKEDGGRRESINDRARRSPRKLPTSLKKGERKWAPPKFLP
                     HKYDVKLQSEDKIISNVPADSLIRTERPPNKEILRYFIRHNALRAGTGENAPWVVEDE
                     LVKKYSLPSKFSDFLLDPYKYMTLNPSTKRKNTGSPDRKPSKKPKRDNSSLSSPLNPK
                     LWCHVHLEKSLNGPPLKVKNSKNSKSPEEHLEEVMKIMSPNKLHSFHIPKKGPSTKKP
                     GKHSDKPLKAKGRGKGILNGQKSTGNSKSPSKCVKTPKTKMKQMTLLDMAKGTQKMTR
                     TPRSSGGVPRSSGKPHKHLPPAALHLIAYYKENKDKEDKKSALSCVISKTARLLSSED
                     RARLPEELRALVQKRYELLEHKKRWASMSEEQRKEYLKKKRQELKERLREKAKERREK
                     EMLERLEKQKRYEDQELGGRNLPTFRLVDTPEGLPNTLFGDVALVVEFLSCYSGLLLP
                     DAQYPITAVSLMEALSADKGGFLYLNRVLVILLQTLLQDEIAEDYGELGMKLSEIPLT
                     LHSVSELVRLCLRRCDVQEDSEGSDTDDNKDSTPFEDNEVQDEFLEKLETSEFFELTS
                     EEKLRILTALCHRILMTYSVQDHMETRQQMSAELWKERLAVLKEENDKKRAEKQKRKE
                     MEARNKENGKEENVLGKVDRKKEIVKIENQVEVEADDMISAVKSRRLLSMQAKRKREI
                     QERETKVRLEREAEEERVRKHKAAAEKAFQEGIAKAKLVLRRTPIGTDRNHNRYWLFS
                     NEVPGLFIEKGWVHNSIDYRFKHHRKDHNNLPDDDYCPRSKKANLGKNASVNAHLGSA
                     LEAVETTVPKQGQNLWFLCDSQKELDELLNCLHPQGIRESQLKERLEKRYQEITHSIH
                     LARKPNLGLKSCDGNQELLNFLRSDLIEVATRLQKGGLGYMEGTSEFEARVISLEKLK
                     DFGECVIALQASVIKKFLQGFMAPKQKKRKLQSEDSTKSEEVDEEKKMVEEAKVASAL
                     EKWKTAIREAQTFSRMHVLLGMLDACIKWDMSAENARCKVCRKKGEDDKLILCDECNK
                     AFHLFCLRPALYEVPDGEWQCPACQPPTARRNSRGRNYTEESTSEDSEGDESGDEEEE
                     EEEEEEEEEDYEVAGLRLRPRKTIRGKQSVIPAARPGRPPGKKSHAARRSRPKDDTEV
                     DELVLQTKRSSRRQSLELQKCEEILHKLVKYRFSWPFREPVTRDEAEDYYDVIDHPMD
                     FQTMQNKCSCGNYRSVQEFLTDVKQVFANAELYNCRGSHVLSCMEKTEQCLLALLQKH
                     LPGHPYVRRKRRKFPDRLADDEGDSDSESVGQSRGRRQKK"
     exon            395..511
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            512..656
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            657..855
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            856..977
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            978..1175
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            1176..2874
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            2875..3013
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            3014..3147
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            3148..3250
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            3251..3349
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            3350..3527
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            3528..3710
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            3711..3858
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            3859..4006
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            4007..4125
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            4126..4256
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            4257..4360
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
     exon            4361..6387
                     /gene="Baz1b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggccgccg cagcggagat cagcgtaagg tgaaagctgc cggaaggagc gagcagaatc
       61 tctccagttt ttcccctcga ggcgttcccc ttgcttccat ggtcgtggcg cggtcccgcc
      121 agctctgagg gaagccggag ttcgcgccgc cctctcaccc ctcccctccc ccatcgcccc
      181 gggagccagg cgcttcgcta gctcgttcgc ccggggctgc ccgggcctag cgctgcgcag
      241 cggagcggcc gagccttcgg cgctccgtcc ctgccggcgc tgccgcgatg gcgccgctgt
      301 tgggccgcaa gccctttcct ctggtgaaac cgctgcccgg agaggagccg ctctttacca
      361 tcccgcacac acaagaggcc ttccgcactc gggaagagta tgaagcccgc ttggaacgat
      421 acagcgagcg catttggacc tgtaagagca caggaagcag tcagctaaca cacaaggagg
      481 cctgggagga agaacaggaa gttgctgaac ttttgaagga agagttccct aactggtatg
      541 agaagcttgt tctggaaatg gttcaccata acacagcctc cttagagaag cttgtagatt
      601 ccgcctggtt agaaatcatg accaaatatg ctgtgggaga agagtgtgac tttgaggtag
      661 gaaaggagaa aatgctcaaa gtgaagattg tgaagattca tcctttggag aaagttgatg
      721 aagaggctgc tgagaagaaa tctgacggga cctgtgattc tccatcaagt gacaaggaga
      781 attccagcca aatggctcag gaccaccaga aggagacagt agtcaaagag gacggaggca
      841 ggagagagag tattaatgac agagcacgta ggtctccgag aaaacttcct acttcgttaa
      901 aaaaaggaga aaggaaatgg gctcctccaa aatttctgcc tcacaaatac gatgtgaagc
      961 tacagagtga ggataagatc atcagcaatg tgcctgcaga cagcttgatt cggacagaga
     1021 gacccccaaa taaggagata ctccgatact tcatccggca taacgcctta cgcgctggta
     1081 ctggggagaa tgcgccttgg gtggtagaag atgaattggt gaagaagtat tccctgccca
     1141 gcaagttcag tgacttttta cttgacccat ataagtatat gactctcaat ccctctacca
     1201 agaggaagaa tactggatct ccagacagga agccctcaaa gaaacctaag agagacaatt
     1261 cttctctgag ttccccacta aaccctaagc tgtggtgtca tgtgcacttg gagaagtcgt
     1321 taaatggccc gccactcaaa gtaaagaact caaagaattc caagtctcca gaagaacatt
     1381 tggaagaggt gatgaaaatt atgtccccca acaagctaca cagcttccac atacctaaga
     1441 aaggcccgtc caccaagaag ccggggaagc acagcgacaa acctctgaag gccaagggca
     1501 ggggcaaagg catcctgaac ggacagaagt ccacaggcaa ctccaagtcg cccagcaagt
     1561 gtgtgaagac gcctaagacc aaaatgaagc agatgacttt gttggatatg gccaaaggga
     1621 ctcagaagat gactcgcacc ccgaggagtt ctgggggtgt gccaaggtct tctggcaaac
     1681 cccataaaca cctaccacct gcagccctgc atctgattgc ctattacaaa gaaaataaag
     1741 acaaagagga caagaagagc gccctgtcct gtgtaatctc caaaaccgca cggcttctct
     1801 ccagtgaaga cagagcccgt cttccagagg agctccgggc tcttgtccag aaacgctatg
     1861 agctcctgga acataaaaag aggtgggcct ctatgtctga agagcaacgg aaagaatatt
     1921 tgaaaaagaa acgacaggag ctaaaggaga ggttgcggga aaaagccaaa gaacggagag
     1981 agaaagaaat gctggagagg ttagaaaagc agaagcgata tgaggaccag gagttaggtg
     2041 gcagaaacct cccgacattc aggctggtag atacccctga ggggctgccc aacacccttt
     2101 ttggggatgt ggccctggta gtggagttcc tgagctgtta ctccgggttg ctcttgcctg
     2161 atgctcagta ccctatcact gccgtgtccc taatggaagc cttgagtgca gataaaggtg
     2221 gttttctgta cttgaacaga gtgctggtca tcctgctgca gaccttactg caggatgaaa
     2281 ttgcagaaga ctatggagaa ctgggcatga agctgtcgga aatccccctc accctgcact
     2341 ctgtctcaga gctggtccgg ctctgcttgc gcaggtgtga cgtccaggaa gacagcgagg
     2401 gctcagacac agatgacaat aaagattcaa caccatttga ggacaacgag gtacaagacg
     2461 agttcctaga gaagttggag acatcagaat tctttgagct gacctcagag gagaagctac
     2521 ggatattgac agctctgtgc caccggatcc tcatgacgta ctctgtgcaa gaccacatgg
     2581 agaccagaca gcagatgtct gcagagttgt ggaaggagcg gcttgccgtg ctgaaggagg
     2641 agaatgataa gaagagagca gagaaacaaa agcgcaagga gatggaagcc agaaataagg
     2701 aaaatggcaa agaggagaac gtgctaggca aagtggacag gaagaaggaa attgtgaaga
     2761 ttgaaaacca agtggaagtg gaagcagatg acatgattag cgctgtcaag agcagaaggc
     2821 tgcttagcat gcaagctaag aggaagcggg aaatccagga gagagaaaca aaagtgagat
     2881 tggaacggga agctgaagag gagcgagtgc ggaagcacaa ggctgcggca gagaaggctt
     2941 tccaggaagg gattgccaag gcaaagctcg tcctgcgcag gacacctatt gggacagacc
     3001 gcaaccacaa ccgatactgg ctcttctcaa acgaggtccc agggttattc attgagaagg
     3061 gctgggtcca taacagcatc gactaccggt ttaagcatca ccgcaaagac cacaacaatc
     3121 tacctgatga tgattactgt ccccgcagta agaaagcaaa cctaggcaaa aacgcaagtg
     3181 tgaatgcaca ccttggatca gcactagaag ctgtggagac cactgtgccc aagcaagggc
     3241 agaacctatg gtttctgtgt gacagtcaga aggaactgga tgagttgctc aattgcctgc
     3301 atcctcaggg aataagggag agtcagctga aagagagact ggagaaacgg taccaagaaa
     3361 ttacacactc cattcatctg gctcggaagc caaatttggg tctaaaatct tgtgacggca
     3421 accaggagct cttaaacttc ctgaggagtg atctcatcga agtggcgacg aggctgcaga
     3481 aaggaggact tggctacatg gagggaacat ccgagtttga agcccgggtc atctccttag
     3541 agaaactgaa ggattttggt gaatgcgtca tcgcccttca agccagtgtc ataaagaaat
     3601 ttctgcaagg tttcatggct cccaaacaga agaaacggaa actccaaagt gaagactcca
     3661 cgaagtccga ggaagtagat gaagagaaga aaatggtaga ggaagcaaag gttgcctctg
     3721 ccttggagaa atggaaaacc gccatccgtg aagcacagac cttctccaga atgcacgtcc
     3781 tccttgggat gctggatgcg tgtatcaagt gggatatgtc tgcagaaaac gccagatgca
     3841 aggtttgccg gaagaaaggt gaggatgaca agctgatcct gtgtgacgag tgtaataaag
     3901 ccttccacct gttctgtctg aggccggccc tctatgaagt accagatggt gagtggcagt
     3961 gtccagcttg ccagcctcct actgccaggc gcaactcccg tggcaggaat tacactgaag
     4021 agtctacctc tgaggacagc gaaggtgatg agagtggtga tgaggaggaa gaggaggagg
     4081 aggaggagga ggaagaagag gattatgaag tggccggctt gcggttgaga ccccggaaga
     4141 ccattcgagg caagcagagt gtcatccctg cagcaaggcc aggccgaccg ccgggtaaga
     4201 agtcacatgc tgctagacgg tcacggccaa aggatgacac agaggtcgat gagctggtac
     4261 ttcagaccaa gcgtagctca aggaggcaga gtctggagct acaaaagtgt gaggaaatcc
     4321 ttcacaaatt agtaaagtac cgcttcagct ggcccttccg ggagcctgtg accagagacg
     4381 aggctgagga ctactatgac gtgatcgacc accccatgga cttccagacc atgcagaaca
     4441 aatgctcctg cgggaactat cggtctgttc aggagttcct caccgacgtg aagcaagtgt
     4501 ttgccaatgc tgagctctac aactgccgcg gcagccacgt gctgagttgc atggagaaga
     4561 cagagcagtg cctgctggcc ctgctgcaaa aacacctccc cggccacccc tacgtccgca
     4621 ggaaacgcag gaagtttcct gataggctcg ctgatgatga aggggacagt gattcagagt
     4681 ctgtcggaca gtccagggga cgaagacaga agaagtaaag aggcagggtc ctagtgaggg
     4741 agccgaggag gggggacagg aggagacctc caaggggtgt gggagaggca gggaagctgg
     4801 gaggatttaa agggaaagtg acggtaggta gcatccagaa aggcctgtca ctccatgctt
     4861 gggcttttct gcaactccca tggggccttt ttcaatcaaa gccaagctct tggggagaat
     4921 cgagctaacc tgatgcgccc tgcccagaga gctagcggca gatgtgggcc ccatcttgag
     4981 ttctgagagg tgggggaagc ctagatatgg cttctcctgt gagctctgcc ctgctctcct
     5041 cctcttcctc ctcctcctcc tcccacctca ttacagcagt gccaagcccc cggtctcaga
     5101 gagggtgttg taccccacag taggaaggag cgtcatcagg ccacgctggg tgaggtgtgg
     5161 atcttttgaa tttatattta tacacagtcc tatttcttta catccgcact gtctcttcct
     5221 cctcctccct ctcaggtgac agtatcagcg agtgccatac agaattctgt gttcaccagc
     5281 atcttgggac agtgtgggct ttgagttgat tgtggcagag tagagggaca ttttctggag
     5341 ctgtccctga ggactgtcta cattgtggca gcccttccta ccctcacccg actcaccgcc
     5401 tcgtaagaaa caaagcaaac taaggcactt cccatagact ggagtcctgc ttccaatcat
     5461 gctatgacct tggctttgat gggtctggcc agaggggtgt tggagcccag cccacccaca
     5521 aaccagacaa gcccttaggg agccggaaaa agagcaggaa gaagttaaaa tgtttaattt
     5581 tttaaattga cttttgtagt tattaaagtt gcttgtttcc gcagtgatat tgtataaaga
     5641 acatcttgta aaataacttg tcatcttgct ttggcacatg tacagtacag tttctatgat
     5701 atgtgttcgc tttactaccc tcaaagaggc cagcaggcag cagggtctgg ggttggagtc
     5761 ctctctgcct acctgtgtgt gcctgctact ccagggccca ctctgcagat ctagtgctcc
     5821 ttcctggatg gtgattgctg tcaacatctg gagagtgggg aaggccagct ctgcccttca
     5881 tagccggtct agccttgtgt tgtattaggc aaaagtttgt agtctgcgtt cccttttatg
     5941 acagattttg ataaaagtac agacagggtt taattttctt ttccatcgat tttcaacttg
     6001 gaaaatgtga gtccctcagc tcttgtttaa aggaaaagaa gtctgccagg tccgggagcc
     6061 cgccattcca ccgttcccgg ggctgaggga aagacagcct tgctgagtgc ggctctgggt
     6121 gtggccccat ccagtagctg aggaaggctt ccttctgttt ctcgaagggg cttggctggg
     6181 ttagcactaa cacaccgtga tcctcttcct gcttcctacc ctagatgttg gtgttttagc
     6241 agaaagctgg tgttcccact gcagtgacat ctacctgcgt ggtggatttt taaattgtct
     6301 taaaggagga agggccacgg taaagggtag acttgtaata aattggaatt tcaaataaac
     6361 attatgtact tgtgtttata aagaaga
//
