LOCUS       NM_001400817            1394 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus basic leucine zipper ATF-like transcription
            factor 2 (Batf2), mRNA.
ACCESSION   NM_001400817 XM_219527
VERSION     NM_001400817.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1394)
  AUTHORS   Tussiwand,R., Lee,W.L., Murphy,T.L., Mashayekhi,M., KC,W.,
            Albring,J.C., Satpathy,A.T., Rotondo,J.A., Edelson,B.T.,
            Kretzer,N.M., Wu,X., Weiss,L.A., Glasmacher,E., Li,P., Liao,W.,
            Behnke,M., Lam,S.S., Aurthur,C.T., Leonard,W.J., Singh,H.,
            Stallings,C.L., Sibley,L.D., Schreiber,R.D. and Murphy,K.M.
  TITLE     Compensatory dendritic cell development mediated by BATF-IRF
            interactions
  JOURNAL   Nature 490 (7421), 502-507 (2012)
   PUBMED   22992524
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jan 27, 2022 this sequence version replaced XM_219527.9.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR21887623.454392.1,
                                           SRR21887623.454374.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMEA5760494
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-115               JAXUCZ010000001.1  212897346-212897460
            116-220             JAXUCZ010000001.1  212899718-212899822
            221-1394            JAXUCZ010000001.1  212904477-212905650
FEATURES             Location/Qualifiers
     source          1..1394
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1394
                     /gene="Batf2"
                     /gene_synonym="RGD1311481"
                     /note="basic leucine zipper ATF-like transcription factor
                     2"
                     /db_xref="GeneID:309178"
                     /db_xref="RGD:1311481"
     exon            1..115
                     /gene="Batf2"
                     /gene_synonym="RGD1311481"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..901
                     /gene="Batf2"
                     /gene_synonym="RGD1311481"
                     /note="basic leucine zipper transcription factor, ATF-like
                     2"
                     /codon_start=1
                     /product="basic leucine zipper transcriptional factor
                     ATF-like 2"
                     /protein_id="NP_001387746.1"
                     /db_xref="GeneID:309178"
                     /db_xref="RGD:1311481"
                     /translation="MQLCGSGVLLTGTDLEESQKQLKKKQKNRLAAQRSRQKHTSKAD
                     ALHQQHESLEKQNHALRKEIQALQSELARWGRTLHLHERLCGVGCGPCPALLPSGCPV
                     QAKQLSGQPAPHGYHGCQEQLFQTPGSSPRAQQLSPGPCYHESPGLLPFPLPSLSSDP
                     LMVRTPLAQLSPSPALSALSSGSSRLGSFSKFDALIPSPPDQLVSPQRLRLEQPTSGR
                     LASSDSPAALGPERPQNGEHLPTQSGSPTHWQKSPVDPSPQALTAFPLLSSAKVHF"
     exon            116..220
                     /gene="Batf2"
                     /gene_synonym="RGD1311481"
                     /inference="alignment:Splign:2.1.0"
     exon            221..1394
                     /gene="Batf2"
                     /gene_synonym="RGD1311481"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atagggcact gggaggggac agctgcttag gggacaccca ggaccggact gaacctctgt
       61 tccccttgcc taagccatgc aactctgtgg gagtggagtg ctgctgactg ggacagacct
      121 cgaggagtct cagaaacagc tgaagaagaa gcagaagaac cggttggctg cccagcgcag
      181 ccggcagaag cacaccagta aggcggatgc tctacaccag cagcacgagt ccttggagaa
      241 acaaaaccac gcccttcgga aggagatcca ggccttgcag tctgagctgg caagatgggg
      301 ccggacactg catctgcatg aacgactgtg cggagtgggc tgtggtccat gccctgctct
      361 gctgccctct ggatgcccag tccaggccaa gcaactctca ggacaacctg cccctcatgg
      421 ataccatggc tgccaggaac aactgttcca gactcctggc tcctctcccc gagcccagca
      481 gctctctcca ggcccatgct atcatgagtc tcctggcctc ctccctttcc ccctgccctc
      541 actgtcctcg gaccctctca tggtgaggac acctctagcc cagctatccc ccagccctgc
      601 cctgtctgca ttatcatctg gttccagccg gctggggtct ttctctaagt ttgatgccct
      661 catacccagt cccccagacc agctggtctc tccacagcgc ctcaggctgg agcagcccac
      721 cagtgggagg ctggcatcct ccgactctcc agctgctcta ggaccagagc gtccacagaa
      781 cggagagcat ttgcctacac agtctggctc cccgactcat tggcagaagt cacctgtgga
      841 ccctagccca caagccctca cagccttccc cctgctctct tctgcaaaag tccacttcta
      901 gcctatgtct agagaggggc tgccttacct gggttcctga ggtagcctga gcacccaagc
      961 agctcctcca tttccattct tcctgagtta ctactgagtg cctgcctacc actgtggacc
     1021 acacaaagcc atcctgcccc tcaccaccac aaaggatgat gggaggacca agtgcaagaa
     1081 ccttgaacct gactggagca cggtctgtgt ccttggcagc attcccaact ctgcacagta
     1141 cctgtacact accgtcgggc tctcccaaaa tggctccttc atgtctcttg ggactactgg
     1201 ggccatgaca gctaggagag taagtaagat ctctgaaagg gtggtcattc acagcagccc
     1261 caagtgcctt gagctcttca ccaggttttc acacatggaa ctgagtgaga cggtgtgtca
     1321 gaagtggacc cactcctgca tcagagcaca catctcggca cataggatgg taaatacagt
     1381 tttccccacc tctt
//
