LOCUS       XM_006235135             681 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus BANF family member 2 (Banf2),
            transcript variant X7, mRNA.
ACCESSION   XM_006235135
VERSION     XM_006235135.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006235135.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006235135.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..681
                     /gene="Banf2"
                     /note="BANF family member 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 10 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:296198"
                     /db_xref="RGD:1307909"
     CDS             355..627
                     /gene="Banf2"
                     /codon_start=1
                     /product="barrier-to-autointegration factor-like protein
                     isoform X3"
                     /protein_id="XP_006235197.1"
                     /db_xref="GeneID:296198"
                     /db_xref="RGD:1307909"
                     /translation="MDNMSPRLKAFLSEPIGEKDVAWVDGISCELAINLVTKGFNKAY
                     VLLGQFLLMHKNEAEFQRWIICCCGATECEARQSSTCLKEWCACFL"
ORIGIN      
        1 tcaggtcttg ggactgattt atcccaaggg ctcaacatat agattactgt tcacaccgag
       61 cttaccacag atccacagta aggagcctgc tgcttcctga ccgactgaac ctgatgtgct
      121 ctttgctgat gtgggctcca tttccctaaa tcaaccaacc cctcagttgg ttttgaagca
      181 aagtgtggca gaggctgtga agaggcaggc acttctgaat tgctcaatcc atggccggct
      241 gacagacagg gctctctaaa accagctttc agatctatct tttctccaag gagttctaaa
      301 acgaacggga agataagaag gcaaacgaga ggagatctgc ttcgaagaaa gaagatggac
      361 aacatgtctc ccaggctgaa agcctttctc tctgaaccca ttggggaaaa ggatgtggcc
      421 tgggtggatg gcatcagctg tgagcttgcc atcaacttgg tcaccaaagg tttcaacaag
      481 gcctatgtcc tgctgggaca gttccttttg atgcacaaga atgaagcaga gttccagagg
      541 tggatcatct gctgttgtgg cgctacggag tgcgaggccc gccagagctc cacctgcttg
      601 aaggagtggt gtgcctgttt cctgtagata cccctgacct ggctgctcta cccccaataa
      661 aggatacacc catgctacct a
//
