LOCUS       NM_001271220            2079 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus BAR/IMD domain containing adaptor protein 2 like
            2 (Baiap2l2), transcript variant 2, mRNA.
ACCESSION   NM_001271220 XM_001063469 XM_003754316
VERSION     NM_001271220.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Pykalainen,A., Boczkowska,M., Zhao,H., Saarikangas,J., Rebowski,G.,
            Jansen,M., Hakanen,J., Koskela,E.V., Peranen,J., Vihinen,H.,
            Jokitalo,E., Salminen,M., Ikonen,E., Dominguez,R. and
            Lappalainen,P.
  TITLE     Pinkbar is an epithelial-specific BAR domain protein that generates
            planar membrane structures
  JOURNAL   Nat Struct Mol Biol 18 (8), 902-907 (2011)
   PUBMED   21743456
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Veltman,D.M., Auciello,G., Spence,H.J., Machesky,L.M.,
            Rappoport,J.Z. and Insall,R.H.
  TITLE     Functional analysis of Dictyostelium IBARa reveals a conserved role
            of the I-BAR domain in endocytosis
  JOURNAL   Biochem J 436 (1), 45-52 (2011)
   PUBMED   21401524
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CH473950.2.
            
            On or before Sep 9, 2012 this sequence version replaced
            XM_003754316.1, XM_001063469.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132263
                              [ECO:0006172]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..2079
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /note="BAR/IMD domain containing adaptor protein 2 like 2"
                     /db_xref="GeneID:685357"
                     /db_xref="RGD:1595091"
     exon            1..201
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     CDS             151..1716
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /note="isoform 2 is encoded by transcript variant 2;
                     brain-specific angiogenesis inhibitor 1-associated protein
                     2-like protein 2; rCG60233-like; BAI1-associated protein
                     2-like 2"
                     /codon_start=1
                     /product="brain-specific angiogenesis inhibitor
                     1-associated protein 2-like protein 2 isoform 2"
                     /protein_id="NP_001258149.1"
                     /db_xref="GeneID:685357"
                     /db_xref="RGD:1595091"
                     /translation="MAPEMDQFYRSTMAIYKSIMEQFNPALENLVYLGNNYLRAFHAL
                     SEAAEVYFSAIQKIGEQALQSSTSQILGEILVQMSDTQRHLNSDLEVVVQTFHGDLLQ
                     HMEKNTKLDMQFIKDSCQHYEIEYRHRAANLEKCMSELWRMERKRDKNAREMKESVNR
                     LHAQMQAFVSESKRAAELEEKRRYRFLAEKHLLLSNTFLQFLGRARGMLQNRVLLWKE
                     QSEASRSPSRAHSPGLLGPALGPPYPSGRLTPTRLDMPPRPLGEYGSPRSRHGSGSYG
                     PEPSEARSASQLEPDRRSLPRTPSASSLYASNTQRSRSNSFGERLGGGGARRVRALVS
                     HSEGANHTLLRFSAGDVVEVLVPEAQNGWLYGKLEGSSASGWFPEAYVKPLEEMPMNP
                     MNPVAPMNSMAPMSPMNELPSRSYPLRGSHSLDDLLDRPGNPAASSDYWDSQSRSRTP
                     SRVPSRAPSPAPPPLPNRRSSVGSMGAATDVKKLMSWEQNPPELFPRGTNPFATVKLR
                     PTVTNDRSAPLIR"
     exon            202..277
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            278..364
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            365..426
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            427..498
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            499..615
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            616..762
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            763..915
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            916..1054
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            1055..1268
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            1269..1391
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            1392..1596
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            1597..1640
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
     exon            1641..2079
                     /gene="Baiap2l2"
                     /gene_synonym="RGD1308786"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attaagcagc cacctcctcc cagactgcac tccatctgca ggggcctacg ctccagcctc
       61 ctcgctgcct gccgcctgtc cagagcaccg ggcctgagta ctcccagcca ggttatagcc
      121 acctgtctcc tcagtgccag caccacttcc atggcccccg aaatggacca gttctatagg
      181 tccaccatgg ccatctacaa gagcatcatg gagcagttta atcccgccct ggagaatctg
      241 gtgtacctgg gtaacaacta cctccgggcc tttcatgctc tgtctgaggc agctgaggtg
      301 tatttcagcg ccatccagaa gattggggag caggccctcc agagctccac atcacagatt
      361 ctgggggaga tcttggttca gatgtcagac actcagcggc acttgaactc agacctggaa
      421 gtggtggtac agacattcca tggagacctg cttcagcaca tggagaagaa caccaagctg
      481 gacatgcagt tcatcaaaga tagctgtcag cactacgaga ttgagtatcg ccaccgagcg
      541 gccaacctgg agaagtgcat gtctgagcta tggcgcatgg aacgcaagag agacaagaac
      601 gcacgggaga tgaaggagag tgtgaaccgg ctgcacgcac agatgcaggc cttcgtgtcc
      661 gaaagcaagc gcgcagcgga actggaagag aagcggcgct accgcttcct ggctgagaag
      721 cacctgctgc tgtccaacac cttcctgcag ttcttgggcc gggcccgagg gatgctgcag
      781 aaccgcgtgc tgctatggaa ggagcagtca gaggccagcc gcagtccgtc gcgtgcccac
      841 tccccggggt tgctgggccc cgcgctgggg ccgccctacc cctcgggccg cctgacgccc
      901 acccggctgg acatgccccc gagacccctg ggagagtacg gctccccccg cagccggcac
      961 ggctccggct cctacggccc cgagccctcc gaggcgaggt ccgcgtccca attggagcca
     1021 gaccgccgat cgctgccccg gacgccgtcg gcctcctcgc tctatgctag caatacccag
     1081 cgctcccggt ctaattcctt cggcgagcgc ctgggcggcg gcggcgccag gagagtccgc
     1141 gccctggtct cccactcgga gggtgccaac cacacgctgc tgcgcttctc ggctggagac
     1201 gtagttgaag tgctggtgcc cgaggctcag aacggctggc tctacggcaa gctggagggc
     1261 tcgtccgcga gtggctggtt ccctgaggcc tatgtgaaac ctttggagga gatgccaatg
     1321 aatcccatga accctgtggc ccccatgaac tccatggccc ccatgagccc aatgaatgaa
     1381 ctgccttcca ggtcctaccc cctccggggc agccacagcc ttgatgacct cttggaccgg
     1441 ccaggcaatc ccgcagcatc atcagactac tgggatagtc agtcccgatc ccggaccccg
     1501 agccgtgtcc caagccgtgc ccccagcccc gcacccccgc ccttgcccaa caggcgcagc
     1561 agtgtgggca gcatgggggc agccaccgac gtcaagaaac ttatgtcctg ggaacagaac
     1621 cccccagagc tctttccacg gggtaccaat ccctttgcca ccgtgaagct gcgtcccact
     1681 gtcaccaacg accgctcagc acccctcatc cgctgaggcg aagctctcca ctggggcctg
     1741 aggtggccca gcacacccac ccagagctat tccagccgac agcagcagca gtggatctga
     1801 gatgccaggc gccaacccag gggaccattc ttacccctct gccccagccc aggatctctc
     1861 tgaggcttgg gcttgcaaca tggagcaggc agaagtgggt ggaggcacaa agcagctggt
     1921 tgtttctggg acccaaagac tcttccaggg acccagcatc ttgccttcca tcttctttct
     1981 gcctgtgccc cgataggaag caccccttct cccacctctg tcccagctgc acccctgctt
     2041 aacttttgta aacgataaga ataaaggaag taggcacag
//
