LOCUS       NM_001034140            2295 bp    mRNA    linear   ROD 16-JUN-2024
DEFINITION  Rattus norvegicus BAR/IMD domain containing adaptor protein 2 like
            1 (Baiap2l1), mRNA.
ACCESSION   NM_001034140 XM_239603
VERSION     NM_001034140.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Aitio,O., Hellman,M., Kazlauskas,A., Vingadassalom,D.F.,
            Leong,J.M., Saksela,K. and Permi,P.
  TITLE     Recognition of tandem PxxP motifs as a unique Src homology
            3-binding mode triggers pathogen-driven actin assembly
  JOURNAL   Proc Natl Acad Sci U S A 107 (50), 21743-21748 (2010)
   PUBMED   21098279
REFERENCE   3  (bases 1 to 2295)
  AUTHORS   Vingadassalom,D., Kazlauskas,A., Skehan,B., Cheng,H.C., Magoun,L.,
            Robbins,D., Rosen,M.K., Saksela,K. and Leong,J.M.
  TITLE     Insulin receptor tyrosine kinase substrate links the E. coli
            O157:H7 actin assembly effectors Tir and EspF(U) during pedestal
            formation
  JOURNAL   Proc Natl Acad Sci U S A 106 (16), 6754-6759 (2009)
   PUBMED   19366662
REFERENCE   4  (bases 1 to 2295)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC105815.1.
            
            On Oct 14, 2005 this sequence version replaced XM_239603.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC105815.1, SRR8487231.173444.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12p11"
     gene            1..2295
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /note="BAR/IMD domain containing adaptor protein 2 like 1"
                     /db_xref="GeneID:304282"
                     /db_xref="RGD:1308452"
     exon            1..277
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     CDS             227..1777
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /note="brain-specific angiogenesis inhibitor 1-associated
                     protein 2-like protein 1; BAI1-associated protein 2-like
                     protein 1; BAI1-associated protein 2-like 1"
                     /codon_start=1
                     /product="BAR/IMD domain-containing adapter protein 2-like
                     1"
                     /protein_id="NP_001029312.1"
                     /db_xref="GeneID:304282"
                     /db_xref="RGD:1308452"
                     /translation="MSRGPEEVNRLTENTYRNVVEQFNPGLRNLINLGKNYEKAVNAM
                     ILAGKAYYDGVAKIGEIATGSPVSTELGHVLIEISSTHKKLNETLDENFKKFHKEIIH
                     ELEKKTELDVKYMNATLKRYQAEHRNKLDSLEKSQAELKKIRRKSQGGRNALKYEHKE
                     IEYVETVTSRQSEIQKFIADGCKEALLEEKRRFCFLVDKHCSFASHIHRYHLQSAELL
                     NSKLPRWQETCCDATKVPEKIMNMIEEIKTPISTPVSGTPQPSPMTERSKMIGKDYDT
                     LSKYSPKMPPAPSVKAYTSPLIDMFNNPATAGQSAEKTNNSTANTGDDPSLQRSVSVA
                     TGLNMMKKQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKVRGW
                     FPSSYTKLLEENMKEAMSVPTPSSAPVRSISTVDLTEKSSVVIPPPDYLECLSMGATS
                     DKRADAAKIPSTSTFKAPVPRPDATSTSPSDSNGTAKPPFLSGENPFATVKLRPTVTN
                     DRSAPIIR"
     exon            278..353
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            354..440
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            441..502
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            503..574
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            575..712
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            713..865
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            866..1033
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            1034..1181
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            1182..1392
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            1393..1470
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            1471..1663
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            1664..1701
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
     exon            1702..2272
                     /gene="Baiap2l1"
                     /gene_synonym="RGD1308452"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggcaggcta cgtttacctc acagcttctc acagagcgaa gcgccgcaaa gttttgacat
       61 tttggcaacg gagacgcaca ctggttctct ccggctgaca gctgtggcgg cagccgactc
      121 ccgagggccg ctcagtcgca agccctaggt tctcccgccg cccgcagtcc ggaggccacg
      181 aggccccgcc gcgtcctccc gcgctcgccc tcccggaggc tgcaccatgt ctcgggggcc
      241 ggaggaggtg aaccggctca cggagaacac gtaccggaat gttgtggaac aattcaatcc
      301 tggactacga aacttaataa acctaggaaa aaattatgaa aaagcagtga atgctatgat
      361 cctggcagga aaagcctact acgacggagt ggccaagatt ggggaaatcg ccactgggtc
      421 tcctgtgtca acagaactag gccatgttct catagagatt tccagcaccc acaagaaact
      481 caacgagact ctcgatgaga atttcaaaaa attccataag gagattatcc atgagttgga
      541 gaagaagaca gaacttgatg taaagtacat gaacgctact cttaaaagat atcaagcaga
      601 acacaggaat aaattagatt ctttggagaa atctcaggcg gagttgaaga agatcagaag
      661 aaaaagtcaa ggtggacgaa acgcactcaa atatgaacac aaagaaatcg agtatgtgga
      721 gacagttacc tctcgccaga gtgagatcca gaagttcatc gcagatggct gcaaagaagc
      781 gctgcttgag gagaagaggc gcttctgctt tctggtggac aagcactgca gctttgccag
      841 tcacatacac cgctatcacc tgcagtctgc agaattactt aactccaagc tgccccgatg
      901 gcaggaaacc tgttgtgatg ccacgaaagt cccagagaaa atcatgaaca tgatagaaga
      961 gataaagacg cccatctcta ccccagtgtc cgggacgcca cagccatcgc ccatgacgga
     1021 gagaagcaag atgattggga aagactacga caccctttct aaatactcac cgaagatgcc
     1081 ccccgctcct tcagtcaaag cctacaccag tcctctgatt gacatgttca acaaccctgc
     1141 cacggctgga cagagcgcag agaaaaccaa caactccaca gcaaacactg gggacgatcc
     1201 cagtttacag cggtcggtct ctgttgcaac tgggctgaac atgatgaaga agcagaaagt
     1261 gaagaccatc ttccctcaca ccgctggcaa caataagacc ttactgagct ttgcccaggg
     1321 ggacgtcctc acactgctca ttcccgagga gaaggacggc tggctctacg gggagcatga
     1381 caccaccaaa gtgaggggct ggttcccatc atcatacaca aagttgctgg aagaaaacat
     1441 gaaggaagct atgtctgtac caacaccaag ctctgcacca gtgagaagca tcagcactgt
     1501 ggatctgact gagaagagca gcgttgtcat ccctcctcct gactacctgg agtgcctgtc
     1561 catgggagcc acctccgaca agagagcaga cgctgccaag ataccttcta cttctacctt
     1621 caaagcccca gtgcccagac cagatgccac gtccacatct cccagtgact caaatgggac
     1681 cgcgaagcca ccattcctca gtggagaaaa cccctttgcc accgtgaaac tccggccgac
     1741 agtgaccaat gaccgatcgg caccgatcat ccggtgaaaa tgcagaggac cctgccggag
     1801 tggttctctc acctgcaggg cgataggtct tcactgctgg acaagtgcag gcactgacaa
     1861 agcccgcaga gggtgcctga tctcaatgaa ccccgacttg agcaaatcaa tgtattttct
     1921 gtttgataga gctgggctta cacaattttg tctttaaggt aaatgagtag cttagtgcat
     1981 aaatgaatcg tttgaagtgt tttcttttct atttaaaaac agtcagtttg gctccagttc
     2041 tttttaattt ttaaggaaac agccagatta aggggtagta ggggtatgct ttagtgcctg
     2101 gctttctgta gctgaatgca agtaagaccg gagttttata aaataaagcc tgtgttctta
     2161 atgcagtatg atgctcatct aaagaaaata ttgtataggt ttgcatcaga gcatgcaaat
     2221 ccagtaagca atgtaaatta tggaactata ttaaatataa ttttttaaat gaaaaaaaaa
     2281 aaaaaaaaaa aaaaa
//
