LOCUS       NM_001107965            2019 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus beta-1,4-galactosyltransferase 2 (B4galt2), mRNA.
ACCESSION   NM_001107965 XM_001072098 XM_242992
VERSION     NM_001107965.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Yoshihara,T., Sugihara,K., Kizuka,Y., Oka,S. and Asano,M.
  TITLE     Learning/memory impairment and reduced expression of the HNK-1
            carbohydrate in beta4-galactosyltransferase-II-deficient mice
  JOURNAL   J Biol Chem 284 (18), 12550-12561 (2009)
   PUBMED   19265195
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474008.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_242992.4, XM_001072098.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2019
                     /gene="B4galt2"
                     /note="beta-1,4-galactosyltransferase 2"
                     /db_xref="GeneID:313536"
                     /db_xref="RGD:1305358"
     exon            1..138
                     /gene="B4galt2"
                     /inference="alignment:Splign:2.1.0"
     exon            139..494
                     /gene="B4galt2"
                     /inference="alignment:Splign:2.1.0"
     CDS             191..1300
                     /gene="B4galt2"
                     /EC_number="2.4.1.38"
                     /note="UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase,
                     polypeptide 2"
                     /codon_start=1
                     /product="beta-1,4-galactosyltransferase 2"
                     /protein_id="NP_001101435.1"
                     /db_xref="GeneID:313536"
                     /db_xref="RGD:1305358"
                     /translation="MSRLLGGTLERVCKAVLLLCLLHFLVAVILYFDVYAQHLAFFSR
                     FSTRSPAHALYPAASSSTNCSRPNTTAASSGLPEVPSARPGPTAPVIPPCPDVPPGLV
                     GRVVIEFTSPMPLERVQRENPGVLLGGRYSPPDCTPAQTVAVIIPFRHREHHLRYWLH
                     YLHPMLRRQRLRYGVYVINQHGEETFNRAKLLNVGFLEALKEDATYDCFIFSDVDLVP
                     MDDRNLYRCGDQPRHFAIAMDKFGFRLPYASYFGGVSGLSKAQFLRINGFPNEYWGWG
                     GEDDDIFNRISLTGMKISRPDVRIGRYRMIKHDRDKHNEPNPQRFNKIQNTKMSMKWD
                     GIGSVRYRVLEVSRQPLFTNITVDIGQPMSWLTQG"
     exon            495..730
                     /gene="B4galt2"
                     /inference="alignment:Splign:2.1.0"
     exon            731..921
                     /gene="B4galt2"
                     /inference="alignment:Splign:2.1.0"
     exon            922..1044
                     /gene="B4galt2"
                     /inference="alignment:Splign:2.1.0"
     exon            1045..1149
                     /gene="B4galt2"
                     /inference="alignment:Splign:2.1.0"
     exon            1150..2019
                     /gene="B4galt2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacttgtaca gtgagggttt gtgtgcatgt ctaggtggct tagtgctggg gtgtgcctag
       61 gatagcagac actgagtcgc cagcggctgc tggtgtgtct gcaggtagaa tagaaacaag
      121 ccggtgagtg tttgaaaggc tggcagccgg atgcttggtc ccattgggcg ggccattggc
      181 cacctgcggg atgagcagac tgctgggggg tacgctggag cgggtctgta aggctgtgct
      241 ccttctctgc ctgctgcact tccttgtggc tgtcatcctc tactttgacg tctacgccca
      301 gcacctggcc tttttcagcc gcttcagtac ccgaagccca gcccatgccc tctaccctgc
      361 agccagcagc agtaccaact gctctcggcc caacaccact gctgccagct ccgggctccc
      421 tgaagtgccc agtgccaggc ctggccccac agctccagtc attccaccct gtcctgatgt
      481 gccgcctggt cttgtgggcc gagtggtcat cgaattcacc tcacccatgc ctctggaacg
      541 ggtgcagagg gagaacccag gcgtgctcct gggcggccgc tattctccac ctgactgcac
      601 cccagcccaa acggtggcag tcatcatccc ctttagacac cgggagcacc acctacgcta
      661 ttggctccac tatctgcacc ccatgttgag gcgacagcgg ctgcgctacg gtgtctatgt
      721 catcaaccag catggcgagg agaccttcaa ccgagccaag ctgctcaacg tgggcttcct
      781 agaggcactg aaagaggatg ccacctatga ctgcttcatc ttcagtgatg tggacctggt
      841 ccctatggat gaccgcaatc tgtaccgttg tggtgaccag ccccgccact tcgccattgc
      901 catggacaag tttggcttcc ggttgcccta tgccagctac tttggaggtg tgtcaggcct
      961 gagcaaggcc cagtttctga ggattaatgg ttttcccaac gagtactggg gctggggcgg
     1021 cgaggacgat gacatcttca accggatctc cctgactggg atgaagatct cacgcccaga
     1081 cgtccggata ggccgctacc gcatgatcaa gcacgaccgg gacaaacata acgagcccaa
     1141 ccctcagagg tttaataaga ttcaaaacac aaagatgagc atgaagtggg acggcattgg
     1201 atccgtgcgg taccgcgtct tggaagtatc tcggcaacca ctcttcacca acatcacagt
     1261 ggacattggg cagcccatgt catggctcac tcaaggctga cactaacgga caaaggccct
     1321 ccatgccctt ctggtatgga aggctgcctg ccagaggact gacctataac ctggctgaca
     1381 gctgctctag gggtgtcccc aagactgaga ctgtgagctg ttttctgagt cttaatagcc
     1441 agcgcaccta gaagtttcag aactcacttt gaggggcgtt tgggcaagcc cctcttacgg
     1501 ccctctctgg ggtcaaccct tcttcctgtc ctacttttcc cagcccaaac ctcctcactg
     1561 ttagggttgg gccagcccct gcactgcctc gcggagtggc ctgagctagg tcactccacc
     1621 tctctgtgcc tcagtttccc cactcccctc gagtccccta gggcctggaa aggtgggagg
     1681 tttaactagg gggcaatgtc tcttccaggg gggaattctc agatctggag acccctcatg
     1741 cttccagggg aggggaaacc tttttcattc aatattgtag ggggcaagct ttggcaagcc
     1801 acctactgag gagcgccccc aggaggggac cagaaggggt gctgtgttgt ttcctgggat
     1861 catggggttg gcctttgcat gggggacagg tgggcctgga tcagtcagtg gttctggcct
     1921 ccctccctta gagaggaggc aggagcccca gggcctactc tgtttttatg ttgcacagaa
     1981 acttgtgtgg gtgctttagt aaaaaacgtt aacggagca
//
