LOCUS       NM_001106211            1594 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus UDP-GlcNAc:betaGal
            beta-1,3-N-acetylglucosaminyltransferase 6 (B3gnt6), mRNA.
ACCESSION   NM_001106211 XM_001064964 XM_217903
VERSION     NM_001106211.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Iwai,T., Inaba,N., Naundorf,A., Zhang,Y., Gotoh,M., Iwasaki,H.,
            Kudo,T., Togayachi,A., Ishizuka,Y., Nakanishi,H. and Narimatsu,H.
  TITLE     Molecular cloning and characterization of a novel
            UDP-GlcNAc:GalNAc-peptide beta1,3-N-acetylglucosaminyltransferase
            (beta 3Gn-T6), an enzyme synthesizing the core 3 structure of
            O-glycans
  JOURNAL   J Biol Chem 277 (15), 12802-12809 (2002)
   PUBMED   11821425
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473956.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_217903.4, XM_001064964.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: CB783110.1 [ECO:0000331]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..1594
                     /gene="B3gnt6"
                     /gene_synonym="RGD1310926"
                     /note="UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase 6"
                     /db_xref="GeneID:292325"
                     /db_xref="RGD:1310926"
     exon            1..35
                     /gene="B3gnt6"
                     /gene_synonym="RGD1310926"
                     /inference="alignment:Splign:2.1.0"
     exon            36..1594
                     /gene="B3gnt6"
                     /gene_synonym="RGD1310926"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..1214
                     /gene="B3gnt6"
                     /gene_synonym="RGD1310926"
                     /EC_number="2.4.1.149"
                     /note="UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase 6 (core 3
                     synthase)"
                     /codon_start=1
                     /product="acetylgalactosaminyl-O-glycosyl-glycoprotein
                     beta-1,3-N-acetylglucosaminyltransferase"
                     /protein_id="NP_001099681.1"
                     /db_xref="GeneID:292325"
                     /db_xref="RGD:1310926"
                     /translation="MALPCSRRSKTPKTLAFLLVGMTFVVLNQWLLQEPMREKANGSV
                     VTPWSSEAAVLRLPLLPAPPCAANVSVDLLDGFQELPARIQDFLRYRHCRRFPQLWDA
                     PHKCVGPRGVFLLLAVKSSPAHYERRELIRRTWGQERSYSGQQVRRLFLVGTSSPEEA
                     AREPQLADLLSLEAREHGDVLQWDFKDTFLNLTLKHLHLLDWTEEHCPGMSFLLSCDD
                     DVFVHTANVLRFLEVQSPERHLFTGQLMAGSVPIRESWSKYFVPRQLFPGTAYPVYCS
                     GGGFLMSRRTAQDLRRASHHVPLFPIDDAYMGMCLQQAGLAPSNHEGIRPFGVQLPGT
                     KRSSFDPCMYRELLLVHRFAPYEMLLMWKALHDPALQCSHRQDAGSPEARGEMISDAH
                     "
ORIGIN      
        1 gcacaggcct gattctcctc tcgcaaagac accagatggc tttgccctgc agtcgcaggt
       61 ccaagactcc caagacactg gctttccttc tagtgggtat gactttcgtg gtgctgaacc
      121 agtggctcct ccaggagccc atgcgggaga aagccaacgg ttccgtggtc actccctggt
      181 cttctgaagc tgctgtgctg cgtttgccgc tcctcccggc gcccccctgc gcggccaacg
      241 tctctgtgga cctcctggat ggcttccagg agttgcccgc taggatccaa gatttcctgc
      301 gctaccgcca ctgccgccgc ttcccgcagc tgtgggacgc gccacacaaa tgcgtggggc
      361 cccgcggcgt cttcctgttg ctggcagtga agtcgtcgcc tgcccactac gagcggcgcg
      421 agctgatccg gcgcacatgg ggccaggagc gcagctacag cggccagcag gtgcgtcgcc
      481 tcttcctggt ggggacctcc tctccggagg aggcggcccg cgagcctcag ctggccgatc
      541 tgctgagcct ggaggcgcgc gagcacggcg acgtgctgca gtgggacttc aaggacacct
      601 tcctcaacct cacactcaag cacctgcacc tgctcgactg gacagaggag cactgcccgg
      661 gaatgagctt cctgctcagc tgcgacgacg acgtcttcgt gcacacggcc aacgtgctgc
      721 gcttcctgga ggtgcagtcg cccgagcgcc acctcttcac cgggcagctt atggctggtt
      781 ctgtgcccat ccgcgaaagc tggagcaagt acttcgtgcc ccgacagctc ttcccaggca
      841 cagcctaccc tgtgtactgc agcggcggcg gcttccttat gtcccgccgc acagcccagg
      901 acctgcgcag agcctcacac catgtcccgc ttttccccat cgacgacgcc tacatgggca
      961 tgtgtctgca gcaggccggc ctggcaccca gcaaccacga aggcatccgg cccttcggcg
     1021 tgcagctgcc cggtacgaaa cgctcatcct ttgacccctg catgtaccgc gagctgctgc
     1081 tggtgcaccg cttcgcgcct tatgagatgc tgctcatgtg gaaggcgctg cacgacccgg
     1141 cgctgcagtg tagccacaga caggatgcag ggtctcccga ggccagaggg gaaatgatct
     1201 ccgatgcaca ctgatgtcac ccagaggaca gatctggaaa acagtatatc ctagtgtacc
     1261 taggtcctag cctcatcttc aggggttctg gtcctattgg gcaggggtgg cttcagacgt
     1321 gtaggtggta tttttcttgt tttaagtcga ctccaagatc tctgggctgg gaatatctat
     1381 ctgttcctcc tcacacacca gtcttccagg gcatctgtct tctgtcctcc attcgtgccc
     1441 tcgtgggcag caagagaggc atggtggcca agatcaatgt cagctgtcaa aagaagcgca
     1501 attataaatg gtcatctcca ctgtttgctc cactaatgag tagagctccc agacgtcagt
     1561 ttacactcag aataaagggg tgtctggcag cctc
//
