LOCUS       NM_001107240            2934 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus UDP-GlcNAc:betaGal
            beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), mRNA.
ACCESSION   NM_001107240 XM_001061345 XM_223674
VERSION     NM_001107240.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2934)
  AUTHORS   Praissman,J.L., Live,D.H., Wang,S., Ramiah,A., Chinoy,Z.S.,
            Boons,G.J., Moremen,K.W. and Wells,L.
  TITLE     B4GAT1 is the priming enzyme for the LARGE-dependent functional
            glycosylation of alpha-dystroglycan
  JOURNAL   Elife 3, e03943 (2014)
   PUBMED   25279697
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2934)
  AUTHORS   Henion,T.R., Madany,P.A., Faden,A.A. and Schwarting,G.A.
  TITLE     beta3GnT2 null mice exhibit defective accessory olfactory bulb
            innervation
  JOURNAL   Mol Cell Neurosci 52, 73-86 (2013)
   PUBMED   23006775
REFERENCE   3  (bases 1 to 2934)
  AUTHORS   Tarantino,C., Paolella,G., Cozzuto,L., Minopoli,G., Pastore,L.,
            Parisi,S. and Russo,T.
  TITLE     miRNA 34a, 100, and 137 modulate differentiation of mouse embryonic
            stem cells
  JOURNAL   FASEB J 24 (9), 3255-3263 (2010)
   PUBMED   20439489
REFERENCE   4  (bases 1 to 2934)
  AUTHORS   Henion,T.R., Raitcheva,D., Grosholz,R., Biellmann,F., Skarnes,W.C.,
            Hennet,T. and Schwarting,G.A.
  TITLE     Beta1,3-N-acetylglucosaminyltransferase 1 glycosylation is required
            for axon pathfinding by olfactory sensory neurons
  JOURNAL   J Neurosci 25 (8), 1894-1903 (2005)
   PUBMED   15728829
REFERENCE   5  (bases 1 to 2934)
  AUTHORS   Shiraishi,N., Natsume,A., Togayachi,A., Endo,T., Akashima,T.,
            Yamada,Y., Imai,N., Nakagawa,S., Koizumi,S., Sekine,S.,
            Narimatsu,H. and Sasaki,K.
  TITLE     Identification and characterization of three novel beta
            1,3-N-acetylglucosaminyltransferases structurally related to the
            beta 1,3-galactosyltransferase family
  JOURNAL   J Biol Chem 276 (5), 3498-3507 (2001)
   PUBMED   11042166
REFERENCE   6  (bases 1 to 2934)
  AUTHORS   Zhou,D., Dinter,A., Gutierrez Gallego,R., Kamerling,J.P.,
            Vliegenthart,J.F., Berger,E.G. and Hennet,T.
  TITLE     A beta-1,3-N-acetylglucosaminyltransferase with
            poly-N-acetyllactosamine synthase activity is structurally related
            to beta-1,3-galactosyltransferases
  JOURNAL   Proc Natl Acad Sci U S A 96 (2), 406-411 (1999)
   PUBMED   9892646
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473996.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001061345.1, XM_223674.3.
            
            ##Evidence-Data-START##
            CDS exon combination :: BE100018.1, CV075576.1 [ECO:0000331]
            RNAseq introns       :: partial sample support SAMEA5760389,
                                    SAMEA5760476 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2934
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14q22"
     gene            1..2934
                     /gene="B3gnt2"
                     /gene_synonym="B3gnt1"
                     /note="UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase 2"
                     /db_xref="GeneID:305571"
                     /db_xref="RGD:1310077"
     exon            1..205
                     /gene="B3gnt2"
                     /gene_synonym="B3gnt1"
                     /inference="alignment:Splign:2.1.0"
     exon            206..400
                     /gene="B3gnt2"
                     /gene_synonym="B3gnt1"
                     /inference="alignment:Splign:2.1.0"
     exon            401..2934
                     /gene="B3gnt2"
                     /gene_synonym="B3gnt1"
                     /inference="alignment:Splign:2.1.0"
     CDS             410..1603
                     /gene="B3gnt2"
                     /gene_synonym="B3gnt1"
                     /EC_number="2.4.1.149"
                     /note="UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase 1"
                     /codon_start=1
                     /product="N-acetyllactosaminide
                     beta-1,3-N-acetylglucosaminyltransferase 2"
                     /protein_id="NP_001100710.1"
                     /db_xref="GeneID:305571"
                     /db_xref="RGD:1310077"
                     /translation="MSVGRRRVRLLGILMTANVFIYLIVEVSKSSSQDKNGKGGVIIP
                     KEKFWKLSSLPRAYWNREQEKLNRWYNPILNRVANQTGDLFTSPNTSHLNYCEPDSTV
                     MTAVTDFNNLPDRFKDFLLYLRCRNYSLLIDQPKKCAKKPFLLLAIKSLIPHFARRQA
                     IRESWGRETNVGNQTVVRVFLLGKTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFF
                     NLSLKEVLFLRWVSTSCPDAEFVFKGDDDVFVNTHHILNYLNSLSKSKAKDLFIGDVI
                     HNAGPHRDKKLKYYIPEVFYTGVYPPYAGGGGFLYSGPLALRLYNVTDRVHLYPIDDV
                     YTGMCLQKLGLVPEKHKGFRTFDIEEKNKKNICSYIDLMLVHSRKPQEMIDIWSQLQS
                     PNLKC"
ORIGIN      
        1 gattccttgc taagcccaac tcctgaagtc gcggtgcgaa ctccgcaccc agcgcctccc
       61 gcatcttgca ttcttggctt tctgggacat tagtgaaacc acgtggaaac ctcatcatgt
      121 ctctgatgac ttcacaacct gaagatccga agaagccaaa caggtatcta ggtggttgcc
      181 ggtattgtgt atgctgagag caaagcggcc gccgcggcaa caagtgctgg agctgaggcg
      241 agccggagcc gcccagaccc cgccgggccg ccggtccgcg cactgcgcat ggagcgagag
      301 cggcggcggt cgcggggctg agccgcacgc gcggctggga cgtggatgcg gccgcggtct
      361 cccgccccgc cccgccgagc tggaggtgtc cctagacaag atatgagaaa tgagtgtggg
      421 gcgtcgaaga gtaaggttgc tgggcatcct gatgacagca aatgtcttca tctatttgat
      481 tgtggaagtc tccaaaagca gtagccaaga caagaatgga aaggggggag tgataatacc
      541 gaaggagaag ttctggaagc tgtccagcct tccccgcgca tactggaata gggagcagga
      601 gaagctcaac aggtggtaca atcccatctt gaacagggtg gccaatcaga cgggggatct
      661 gttcacatct ccaaacacaa gtcacctgaa ctattgtgaa ccggactcga cagtcatgac
      721 agctgtgaca gattttaata atctgccgga cagatttaaa gactttctct tgtatttgag
      781 atgccgaaat tactcgctgc tcatagatca accgaagaag tgtgcaaaga agcccttcct
      841 actgttggcg ataaagtccc tcattccaca tttcgccaga aggcaagcaa ttcgggaatc
      901 ttggggccga gagaccaatg tagggaacca gacagtggta agggtcttcc tgttgggcaa
      961 gacaccccca gaggacaacc accctgacct ctcggacatg ctgaagttcg agagtgagaa
     1021 gcaccaggac atcctcatgt ggaactatag agacacattc ttcaacctgt ctctcaagga
     1081 agtactgttt ctcaggtggg tgagcacttc ctgtccagac gccgagtttg tcttcaaggg
     1141 tgatgatgac gtgttcgtga acacccatca catcctgaat tacttgaata gcttatccaa
     1201 gagcaaagcc aaagacttgt tcataggtga cgtgatccac aatgctgggc cccatcggga
     1261 taagaaactg aagtactaca tcccagaagt cttctacact ggggtctacc caccgtatgc
     1321 agggggcggt gggtttctgt actctggccc gctggccttg aggctttaca atgtaactga
     1381 ccgggtccac ctctacccca tcgatgacgt ttatactgga atgtgccttc agaaactggg
     1441 ccttgttccg gagaaacaca aaggcttcag gacatttgat attgaagaga aaaataagaa
     1501 aaatatttgt tcatatatag atctaatgtt agtacacagc aggaaacctc aagagatgat
     1561 tgacatctgg tctcagttgc aaagtcctaa tttaaaatgc tagaatacgc gtgagctact
     1621 cttcacagaa aggcctagcc tgactagttc ccatggtgtg tttccacagt aggcaagttc
     1681 tgtgtgaatc gttagccttc atgagtaggt agcccccggg cctccaagtc cccagtccct
     1741 cgcctgtgac gagggaaaga aagcggagga agataaatca ccgaggcagg gtgcgtggtt
     1801 accgcccttc tctggctgcc agtcctcagt ttctgctttt tctttcctcc tccagaagct
     1861 gaccgtgaaa attttttgtt gttgttcttg tatgtagtgt gctcctgttt ccgctttaag
     1921 gatggatgga cagatgccag attatataaa ccaagattcc gtaggacacg acctggtggt
     1981 tttgtgcaac ggaattctat ttattttcgt aagattttga tggattttta aagttgccta
     2041 gaaagtggac cgacgtcagc cctccctgtc acccggcagt attggctttt gttactagaa
     2101 actgctactt tcttcacacg agagaggcca cgcagcgcgc gtagcttccg tgtgtttggt
     2161 ttcctgggtg gcatcgtggt agttaaccta attttagtat tttgaaaatc gtgagtgtga
     2221 ttccctaatg gccaactaaa gactgagtag cctgacagcc atacgggtct gtgcgtgttc
     2281 agcgtgggcc cttggaagcg ttcgtgactt ccgaactgga gaagagaaaa tttgcaggca
     2341 ttttcctaag tggtttgtca gcttaaaact cccaggttct attcttgcca tattctctgt
     2401 cccatgttca ttccttagat aaaactctcc tgggtagcgg cgcctcccga tctaagtgga
     2461 ggtgccagtg tttttattta ttgtttagat caaagaccaa aacattttct taaaaaaaaa
     2521 tattttgtgt aatgttttat ttgtatacag tgttgtttgt gaaatattta actagagcat
     2581 gattttattt tttcctcatt ttttaattag ttctttgaga atttcataca atgttttttt
     2641 tttttgattg catacacacc tctcccgtct cctcccagat acagcaccta gcatgatgtt
     2701 ttaaatgtca agctgtaaca tgttaaataa agttaactat tatttttgaa ttatcgaatt
     2761 tggatcgggg ggggggtatg aactgctaga gaaaataaag ttctgccaaa ttatcgctga
     2821 ctcttctctt gtaacgtgct ctcttgaaat attttttgtg ctttagaggg ttctcctctg
     2881 tgctactggg gactgggaaa aaaagtggaa ataaagtaat tgtatttttt aatc
//
