LOCUS       NM_001398955            4429 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus beta 3-glucosyltransferase (B3glct), mRNA.
ACCESSION   NM_001398955 XM_039089847
VERSION     NM_001398955.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4429)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Dec 28, 2021 this sequence version replaced XM_039089847.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.308227.1,
                                           SRR26643297.39152.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-119               JAXUCZ010000012.1  10383072-10383190   c
            120-169             JAXUCZ010000012.1  10365133-10365182   c
            170-209             JAXUCZ010000012.1  10352486-10352525   c
            210-319             JAXUCZ010000012.1  10347451-10347560   c
            320-396             JAXUCZ010000012.1  10331152-10331228   c
            397-508             JAXUCZ010000012.1  10330353-10330464   c
            509-645             JAXUCZ010000012.1  10327000-10327136   c
            646-709             JAXUCZ010000012.1  10320583-10320646   c
            710-829             JAXUCZ010000012.1  10318499-10318618   c
            830-899             JAXUCZ010000012.1  10315420-10315489   c
            900-1013            JAXUCZ010000012.1  10309967-10310080   c
            1014-1113           JAXUCZ010000012.1  10308996-10309095   c
            1114-1233           JAXUCZ010000012.1  10304582-10304701   c
            1234-1378           JAXUCZ010000012.1  10300487-10300631   c
            1379-4429           JAXUCZ010000012.1  10291910-10294960   c
FEATURES             Location/Qualifiers
     source          1..4429
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12p11"
     gene            1..4429
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /note="beta 3-glucosyltransferase"
                     /db_xref="GeneID:689765"
                     /db_xref="RGD:1588723"
     exon            1..119
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..1546
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /EC_number="2.4.1.122"
                     /note="beta 1,3-galactosyltransferase-like, pseudogene 1;
                     beta-1,3-glucosyltransferase"
                     /codon_start=1
                     /product="beta-1,3-glucosyltransferase precursor"
                     /protein_id="NP_001385884.1"
                     /db_xref="GeneID:689765"
                     /db_xref="RGD:1588723"
                     /translation="MRPPALLALFSCSAAFALVSEEIKEKVTPSQDLRQSSLPRSHDI
                     DLKEIVFVIQSQSNPFHARRAEQLRRNILRQAANLTQDLPRVLLLHQLAKQEGAWTIL
                     PLLPQFSVTYSKNSAWIFFCEEETRIQIPRLLETLRRYDPSKEWFLGKALYDEESTII
                     HHYAFSENPTVFKYPDFAAGWALSIPLVSKLTKKLKSEPLKSDFTIDLKHEIALYIWD
                     KGGGPALTPVPEFCTEDSDPLCATTFHSFLPLCGMPVKKEEIFVAVKTCRKFHADRIP
                     IVKKTWAAQASHIEYYSDYAETSIPTVDLGIPNTDRGHCGKTFAILERFLNHSHDKIA
                     WLVIVDDDTLISISRLRHLLSCYDSSDPVFLGERYGYGLGTGGYSYVTGGGGMVFSRE
                     AIRRLLASNCRCYSNDAPDDMVLGMCFSGLGIPVTHSPLFHQARPVDYPKDYLSHQIP
                     VSFHKHWHIDPVKVYLTWLAPSEEDQATQETQKDPREEL"
     exon            120..169
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            170..209
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            210..319
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            320..396
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            397..508
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            509..645
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            646..709
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            710..829
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            830..899
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            900..1013
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            1014..1113
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            1114..1233
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            1234..1378
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            1379..4429
                     /gene="B3glct"
                     /gene_synonym="B3galtl; B3galtl-ps1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcgcgagaa gggtcaggcg cgcagggcgt ccgcgcagct cggcttcggg aagggcgcgg
       61 agcctcggtc gccgggatgc ggccgcccgc gctgttggcg ctgttcagct gctccgcggc
      121 ttttgctttg gtgtctgaag agataaaaga aaaggtcacg ccttctcagg atttgaggca
      181 aagtagtcta ccaaggagtc atgacataga cttaaaagaa atcgtgtttg tcatccagag
      241 tcagagtaat ccttttcatg ccaggagagc agaacagctg agaagaaaca tcttaaggca
      301 ggctgcaaac ctgacacagg atctccccag agtcctcctt ctccatcagt tggcgaagca
      361 ggaaggtgct tggaccatcc ttcccttgtt accgcagttt tcggtaacgt acagcaagaa
      421 ttcagcgtgg attttcttct gtgaagaaga gacgagaata caaatcccca gactcctaga
      481 aacgctcaga cgatatgacc catctaagga atggtttttg ggaaaagcac tgtacgacga
      541 agaatccacg atcattcacc attacgcctt ctctgagaac ccgactgtct ttaaatatcc
      601 ggacttcgct gctggctggg cccttagcat cccgcttgtg agcaagctca ccaagaaatt
      661 gaagagcgag ccgctgaagt ctgacttcac aatcgattta aagcacgaga ttgccctcta
      721 catctgggac aaaggtggag gacctgccct cacccctgtg cctgagtttt gtacggaaga
      781 ctcggacccc ctctgtgcca ccacctttca ttctttccta cctctctgtg gaatgccggt
      841 aaagaaggag gagatttttg ttgcagtaaa aacgtgcagg aaatttcatg ctgacagaat
      901 acccatcgta aagaagacat gggcggcaca ggccagccat atcgaatact acagtgacta
      961 cgcggaaacc tccatcccta ctgtggattt gggaattccc aatacggaca ggggtcattg
     1021 tggaaaaacc tttgccattt tggaaagatt tttgaatcac agtcatgaca aaattgcgtg
     1081 gttagtcatc gtggatgatg acacattaat cagcatctcc aggctccggc acttgcttag
     1141 ctgttatgac tccagtgacc cggtgttcct gggtgagcgc tacggctacg gcctaggcac
     1201 aggcggctac agctacgtca caggaggagg cggcatggtg ttcagcaggg aagccatccg
     1261 gagacttctt gcgagcaact gccgttgcta cagcaacgac gctcccgacg acatggtcct
     1321 gggcatgtgc ttcagcgggt tgggaatccc cgtgacacac agccctctct tccatcaggc
     1381 tcggccagta gattacccca aggactacct ctcccatcag attccagtat catttcacaa
     1441 acactggcac attgacccgg taaaggtgta tctcacgtgg ctggcaccca gtgaggaaga
     1501 ccaagccacg caggagacac agaaggatcc aagagaagaa ttatagggcg agtgtgggac
     1561 acgcggatac aagagattcg ccctgtctat ggagcgtcag tccgactgct tgtatgtgcc
     1621 atgtgaagcg ggcacttccc agccctcatg gatatgtggt attttttgga tgggtaaact
     1681 cctagaggga cctggggaaa aaaatcactt gttttgattg atgtctttat tgtaacacaa
     1741 caattattgt gcctagtata gccaccacgg gctgtgacac aacagctctt tgactgtcac
     1801 aggaaataaa tggctcctga agtccttttc tattttctcc attgtaacgg ggactctaat
     1861 acaagaatat gactggctac cactccacat aaacattgag tcttttagac atttgccaaa
     1921 ggaatgacct ttaagccagc ggttcttggc ttgtgggtct cgaccccctg ggaatggcag
     1981 tggtcagata tccggtatcc tgtgcattag gtatctacat ttcgatccac aactgtagaa
     2041 aaatgaacag ttgtgaaagt agcagggaaa tagttttctg gtcatggtgt cagcacaaca
     2101 cgaaggaagc atattaaaga gtcagtgcct caggaaggtg gagaaccacg acttttaagt
     2161 ggtcctgctg atagaaattg gttcccaggc actcagtagg aatgcggtac caaggctagt
     2221 tagtacaacc taaaactcaa tgtgaactcc accagctgta caatcacggt tactctttcc
     2281 cccgttctgc tgcttgcacc ccaaaaaaca gaaactcaag gccatctggt gaagcctctg
     2341 ctccctttga agtgcatgtt ggtgccagtc tccccaaagt cctcccatgt agagtggaca
     2401 ggacgtcatc agaaattagg atctcttctg tgtcagcagc ggggatggga gtctggagat
     2461 gtgagcagct tctggagctg gcctgtaact cttgcttttc tctgagtgat acatagtaac
     2521 ttgcttctgg ctcaggctag accatccggg tcctggtagc tgcagcctgg agtctcagga
     2581 gaggacagca cctggctggg caatttctct gtttttgttt ttgtttttgt ttttttataa
     2641 agaatgaaat ctgaacaact gtgttttaaa gcaaccctca ttttccaatc acacctttta
     2701 ttatgtcgga atttaacagt tcagtattaa tatgtagagt actgtgtgtt aatgtttaaa
     2761 gacgatgatt ttgttatata aaggtctttg catgtgatct gatctcaagc tcctggggtt
     2821 atatgtcata atccttcctt taattctatc tgtgcttcat taaccttact taaaggcttc
     2881 taaaccccta cagcctttaa agccacacca tcgaaaatac ctgtgtaatt attttttatc
     2941 tgtatgttct atgtcgctga cttttgactc atgttgatgt aatagtatct atcatcctct
     3001 tcccaaatta ataagtacca ggactgacgt gtggcctgct acttttggcc tctggtggaa
     3061 cacagtctgg gaaaatggat tttgtggttc agccagaaac tgggcagagg acagtcaagt
     3121 gcatgaaaag ggaccatacg ggtgtctggg tgccagctga tgactccagc atcattgctg
     3181 atacagctgt gggtgtggcc gttgctatga cagctcttac actgagcact aataccgacc
     3241 cccggggggc gggggctggc tgctacacca gtacaggaca gggatccgct cagcccatcc
     3301 ctccacctct gctcatgaag ttaccagcct gagaccagag gaagtttcat ttggtaggac
     3361 agaagctagc agtcgtctaa acctttcttt tcatgagctg tgtcctcttc ctccccaccc
     3421 ctcacccccc caggatccct cctggtattt ctagatatgt ggttaaatat gtttcccttt
     3481 tggaactaca ggagccttgc cgtgaataca atgtctccac ttccgttcac atttatctat
     3541 tggttgaggc tagatggggg gtggggagaa gcatgaagga caggatcgga ggaattggga
     3601 acactggcag atcagtaagg caatcgatgc aagctaaaca aattaggaaa aagcaaagaa
     3661 ataaaaatat agtttacaaa ggtattatgt ttgatggagc aaatgacagg ccctatttga
     3721 acaccaactg agatttgata tcttaaaaaa caaaaacaga aaacgtaatc ttgagcctgg
     3781 agtttcgggg cacattccac cctcttcgct gttcttttcc cctttaagta aggatttctt
     3841 tgccaatgga tatttttatc ctaaggattt agcaccaagg atttatgtat ggaattacct
     3901 agtaggtcat ttttacactt aagccatttc tcatgaccca gcacatcgcc tgactgtagg
     3961 ctttttacat cttacagcta aatcagacgt cgagacacaa aaataacctt tgtcgaatgc
     4021 tcgggaacgt aatcgctcag cagcccgagt aacaaacgat gctacgcaga gtcatgtaga
     4081 cgccagtgtt ctctgcgtgc cctgattgat cggcgatgtt tagtgcatca tggccatcac
     4141 ggttattgat gtgtatagag aacctcagag actcacaaca cagtagacat ttgtaagaat
     4201 atttgtggcg cctcggttcg tagacgcatc atttctgtgg aagaaaatca atcaatgtac
     4261 cattacgtat gctatagcag acttacaaag ggtctttgtt cctgcccgtc tttgaatgac
     4321 aggcctgaaa aggtgctatt gtttatgtcc ccaagccctc taaacaagtc acctgcaaaa
     4381 tgtgttctcc tcctttctat agaataaaat aacagctttg tttctggta
//
