LOCUS       NM_001399767            1407 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus beta-1,3-galactosyltransferase 9 (B3galt9), mRNA.
ACCESSION   NM_001399767
VERSION     NM_001399767.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389,
                              SAMN09345331 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-48                JAXUCZ010000003.1  38519113-38519160
            49-1407             JAXUCZ010000003.1  38520284-38521642
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..1407
                     /gene="B3galt9"
                     /gene_synonym="B3gnt10; Gm34653"
                     /note="beta-1,3-galactosyltransferase 9"
                     /db_xref="GeneID:103691796"
                     /db_xref="RGD:9424697"
     exon            1..48
                     /gene="B3galt9"
                     /gene_synonym="B3gnt10; Gm34653"
                     /inference="alignment:Splign:2.1.0"
     CDS             43..1152
                     /gene="B3galt9"
                     /gene_synonym="B3gnt10; Gm34653"
                     /note="putative UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase LOC100288842;
                     putative UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase LOC402377;
                     putative UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase LOC100288842
                     homolog"
                     /codon_start=1
                     /product="beta-1,3-galactosyltransferase 9"
                     /protein_id="NP_001386696.1"
                     /db_xref="GeneID:103691796"
                     /db_xref="RGD:9424697"
                     /translation="MQVTLCRLRTHQWCFLLFNVVLFHVLLFGADFVEEYFLRSLPRV
                     DMKILSIKNKARKLNLEPLRHNPSKYYVLSQPEVCNGKTIFLLSLIFSSPGNATRREL
                     IRKTWGSVTSVRGYPILTLFALGMPALVATQEELDAEAQENNDIIEGIFLDSSENQTL
                     KIISMTQWAVAFCPNALFVLKADEDTFINLPGLVDYLLNLKGQMEGIYLGRVIHQDIP
                     NRDPHSQEFVPLSEYPEKYYPDYCSGEAFIMSQDVARMMCVVLNEAPIMVPADVFVGI
                     CAKSLGLTPSHSSRFSGERHITYNRCCYKFIFTSSEATDAETSLAWKEMNDGKECSVF
                     ETYYGLISCKLLTYLDSFRHFHWRSSEDRAGYFGD"
     exon            49..1407
                     /gene="B3galt9"
                     /gene_synonym="B3gnt10; Gm34653"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacttaataa tttccgaagt cccaaaattg cccacagaga acatgcaggt gacgctctgc
       61 cgacttcgga ctcaccagtg gtgtttcctc ctctttaacg tcgtactatt tcatgtgttg
      121 ctcttcggag ctgactttgt agaagaatat ttcttacgtt ctttgcctcg cgtggacatg
      181 aaaattctca gcattaaaaa caaggcaaga aaactgaacc tggaaccttt aaggcacaat
      241 ccttccaagt actatgtcct gagccagccg gaggtgtgca acgggaagac catctttctg
      301 ctctctctta tcttcagtag tccagggaac gcaacaagac gggagctcat caggaaaacc
      361 tggggtagtg tgaccagcgt ccgaggctac ccaattctca cgctgtttgc tctgggaatg
      421 ccggcgctgg tcgctacgca ggaagagtta gatgcagagg ctcaggagaa taatgacata
      481 attgaaggga tcttcctgga cagttcggaa aaccaaacgc tgaagatcat ctcaatgacc
      541 cagtgggctg tagccttctg tcccaacgcc ctgttcgttc tcaaggctga tgaggacacg
      601 tttatcaatc taccaggctt ggtagactat cttctcaatc tgaaaggtca gatggaaggt
      661 atatatctag gaagggttat ccatcaggat atacctaaca gggaccccca tagccaagaa
      721 tttgtccctc ttagtgagta ccccgaaaaa tactacccag actactgcag tggtgaggcc
      781 tttataatgt cccaagatgt ggctcggatg atgtgtgtgg ttttgaacga agcacccatc
      841 atggtgcctg ctgatgtatt tgtggggatc tgtgctaagt ccctgggcct tacacctagc
      901 cacagttcaa ggttttctgg ggaaaggcac atcacatata acagatgctg ctacaagttc
      961 attttcacat cctcagaagc tacagatgct gaaacttccc tagcatggaa agaaatgaat
     1021 gatgggaaag aatgttctgt gttcgagact tattatgggc tcatctcctg caagcttctg
     1081 acatacctgg acagcttcag gcattttcac tggaggagct cggaagaccg tgctgggtat
     1141 tttggtgatt agtatccact cgctgttaga tgtcttcttc ttacattgct gctttcctac
     1201 tacagaaggc aactctctgg acccatgcta tgtcttctct gaatctttat tcacacctag
     1261 caaaaccaca agacgttctc agtgttctga tgtactcagt cttgacatct tggttttgat
     1321 gtttaagaca tttaaaacag gatggtgtga tacttttcaa aataaaatct ctcagaaaag
     1381 agaaaacatt aagtttcatt ataacat
//
