LOCUS       NM_133553               1576 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus Beta-1,3-galactosyltransferase 4 (B3galt4), mRNA.
ACCESSION   NM_133553
VERSION     NM_133553.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Hurt,P., Walter,L., Sudbrak,R., Klages,S., Muller,I., Shiina,T.,
            Inoko,H., Lehrach,H., Gunther,E., Reinhardt,R. and Himmelbauer,H.
  TITLE     The genomic sequence and comparative analysis of the rat major
            histocompatibility complex
  JOURNAL   Genome Res 14 (4), 631-639 (2004)
   PUBMED   15060004
REFERENCE   2  (bases 1 to 1576)
  AUTHORS   Amado,M., Almeida,R., Carneiro,F., Levery,S.B., Holmes,E.H.,
            Nomoto,M., Hollingsworth,M.A., Hassan,H., Schwientek,T.,
            Nielsen,P.A., Bennett,E.P. and Clausen,H.
  TITLE     A family of human beta3-galactosyltransferases. Characterization of
            four members of a
            UDP-galactose:beta-N-acetyl-glucosamine/beta-nacetyl-galactosamine
            beta-1,3-galactosyltransferase family
  JOURNAL   J Biol Chem 273 (21), 12770-12778 (1998)
   PUBMED   9582303
REFERENCE   3  (bases 1 to 1576)
  AUTHORS   Miyazaki,H., Fukumoto,S., Okada,M., Hasegawa,T. and Furukawa,K.
  TITLE     Expression cloning of rat cDNA encoding UDP-galactose:GD2
            beta1,3-galactosyltransferase that determines the expression of
            GD1b/GM1/GA1
  JOURNAL   J Biol Chem 272 (40), 24794-24799 (1997)
   PUBMED   9312075
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC126083.1 and BX883042.1.
            
            On Sep 12, 2009 this sequence version replaced NM_133553.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC126083.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1570              BC126083.1         1-1570
            1571-1576           BX883042.1         123675-123680       c
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..1576
                     /gene="B3galt4"
                     /note="Beta-1,3-galactosyltransferase 4"
                     /db_xref="GeneID:171079"
                     /db_xref="RGD:620328"
     exon            1..1576
                     /gene="B3galt4"
                     /inference="alignment:Splign:2.1.0"
     CDS             224..1339
                     /gene="B3galt4"
                     /EC_number="2.4.1.62"
                     /note="GAL-T2; b3Gal-T4; beta3Gal-T4; beta-1,3-GalTase 4;
                     ganglioside galactosyltransferase;
                     UDP-galactose:beta-N-acetyl-galactosamine-beta-1,
                     3-galactosyltransferase; beta3GalT4; UDP-Gal:betaGlcNAc
                     beta 1,3-galactosyltransferase, polypeptide 4"
                     /codon_start=1
                     /product="beta-1,3-galactosyltransferase 4 precursor"
                     /protein_id="NP_598237.2"
                     /db_xref="GeneID:171079"
                     /db_xref="RGD:620328"
                     /translation="MPLSLFRRLLLAVLLLVIIWTLFGPSGLGEELLSLSLASLLPAP
                     ASPGPPLALPRLLIPNPQACGGSGPPPFLLILVCTAPEHLNQRNAIRGSWGAIREARG
                     FRVQTLFLLGEPMGQQFADLASESAAQGDVLQASFQDSYRNLTLKTLTGLNWVNKYCP
                     MARYILKTDDDVYVNVPELVSELIQRGGPSEQWQKGKEPQEETTAVHKEHKGQAVPLL
                     YLGRVHWRVRPTRTPESRHHVSEELWPENWGPFPPYASGTGYVLSISAVQLILKVASR
                     APYLPLEDVFVGVSARRGGLAPTHCVKLAGATHYPLDRCCYGKFLLTSHKVDPWKMQE
                     AWKLVRGLNGRRTEPFCSWLQGFLGTLRCRFIAWLNS"
ORIGIN      
        1 gggcgggatg gagccgagtt ccgcgtgcag gcgaggggaa ccaagctgtc cccggggccg
       61 gctgcggtgg gtcgggaccg gagtgcatga gactgactgc atctcatgat gctaccgggc
      121 ccgtgcatgg ctcaccctgt ctctgctgca gcagctggtt agggccgctc tcgcagctcc
      181 cagcgctctt aacagctctg cccacaggtc tctgcggctc accatgcccc tcagcctctt
      241 ccggcgcctc cttctggcgg tcctactact ggtgatcatc tggacactgt ttggaccatc
      301 gggtttgggg gaggagctgc tgagcctgtc cctggcgtcc cttctgccag ccccagcctc
      361 gccaggacca cccctggccc tgccccgcct cttgattcct aacccccagg cctgtggtgg
      421 ctccggaccc cctcctttct tgctcatcct ggtgtgtacg gccccggagc acctgaacca
      481 gagaaacgcc attcggggat cttggggcgc cattcgcgag gcccgcggtt tcagggtgca
      541 gacgctcttc ctcctgggag aacctatggg acagcagttt gctgacctgg cctcagagtc
      601 agcagcacag ggggatgtct tgcaggcctc cttccaggat tcctaccgca acctcaccct
      661 caagaccctc accggactga actgggtgaa caaatactgt cctatggccc ggtacatcct
      721 caagacagat gatgacgtgt atgtcaatgt cccagagctg gtgtcagaac tgatacagag
      781 aggggggcct tcagagcaat ggcagaaggg caaagagcca caggaagaga caacagctgt
      841 ccacaaagag cacaaaggcc aggcagtgcc ccttctgtat ttaggccggg tgcactggag
      901 ggtgaggccc actcgaacac cagagtcccg gcatcacgtg tcagaagaac tgtggccaga
      961 aaactggggt cctttcccac cctacgcctc tggcacgggg tatgtattgt ctatctctgc
     1021 tgtgcagctc attctgaagg tggccagccg ggccccatat ctacctctgg aggatgtctt
     1081 tgtgggagta agcgcaaggc gagggggcct tgcccccaca cactgtgtca agttggctgg
     1141 tgctacccac tacccactgg ataggtgctg ttacgggaag ttcctgctga cgtcccacaa
     1201 ggtggatcct tggaaaatgc aggaagcctg gaagctggtg agaggactga atgggagaag
     1261 gactgagccc ttttgttcct ggctccaggg atttctgggt accttgaggt gccggttcat
     1321 agcctggctc aatagttgag agcctggggc cacagaaaac aagacagcac ctcaggaact
     1381 tttgccccaa aatcagtgcc caggctgcag ctccccgtgg tgatctattt ccccacagca
     1441 gactctgaag ctgctactga ccaaggatag atagggggct tggggcctgg cctgccatct
     1501 ccaaagacca gggagggacg aagcacaggg tgtggggaag actcaagagc ccaataaaca
     1561 cgtctctcta cctcaa
//
