LOCUS       XM_039104239            1358 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus arginine vasopressin (Avp), transcript
            variant X2, mRNA.
ACCESSION   XM_039104239
VERSION     XM_039104239.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1358
                     /gene="Avp"
                     /gene_synonym="ADH; DI; Vas; VP"
                     /note="arginine vasopressin; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 3 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:24221"
                     /db_xref="RGD:2184"
     CDS             908..1300
                     /gene="Avp"
                     /gene_synonym="ADH; DI; Vas; VP"
                     /codon_start=1
                     /product="vasopressin-neurophysin 2-copeptin isoform X2"
                     /protein_id="XP_038960167.1"
                     /db_xref="GeneID:24221"
                     /db_xref="RGD:2184"
                     /translation="MNHKIPCLPCGPGGKGRCFGPSICCADELGCFLGTAEALRCQEE
                     NYLPSPCQSGQKPCGSGGRCAAAGICCSDESCVAEPECREGFFRLTRAREQSNATQLD
                     GPARELLLRLVQLAGTQESVDSAKPRVY"
ORIGIN      
        1 gaggtacaga ccaactttac tgtcacactt aagcgtgatc acaattggag gccaaggttc
       61 gaatgtgagg tagctgcacc catggaaacc ttccctagga gagaagactc agtgcagaag
      121 agagcacggg atggcttgaa cctcactctg actgaccagg gctccacttg ttggagtggc
      181 tccatcctcc ccccaacccc gtacttggga tggaactcag ggtgtcattc attctaggca
      241 agtgttcccc caaccccatg agacatcctc acaatccgcc cagaagagag ggtttccagg
      301 aggccacaga agtaaagata agagaggggc agcttgtcac agctcctagt atcttctagc
      361 aacaaggcag tgctacatag cacaatagtt tgtctcttcc aacacttcta tttaaaaaaa
      421 aaaacagccc ttcccactgt gcaccttgtg ctaaggaatc aaaccctagg cctcaggcac
      481 acgaggcagg gaagttacta cggagcactc aggaggcaga ggcaggtaga tctctaggtt
      541 taaggcctgg tttacacagc aagtttctgg acatccagaa ctggacaaag agaccctgtc
      601 tgaagaagta aaggagggag ggaatgggcc cctcagggca ccggagagat ggctcagtag
      661 ttaagaacac tcttgctctt gcagaggacc tacattctat tgccagtacc cacatggtag
      721 ctcacagcct tctgtaactt tagttttagg gaatctgaca cttctgaaaa cagatgggtc
      781 catcacaatc aggcatgact ggagcaaggt ccctaccatt cgctcctgaa ctatttgcta
      841 ctgacagatt caggaacaga gggaacacag tgcctccggc tcacacagat gctcctgctt
      901 aaactaaatg aatcacaaaa taccctgtct cccctgcggc cctggcggca aagggcgctg
      961 cttcgggccg agcatctgct gcgcggacga gctgggctgc ttcctgggca ccgccgaggc
     1021 gctgcgctgc caggaggaga actacctgcc ctcgccctgc cagtctggcc agaagccttg
     1081 cggaagcgga ggccgctgcg ctgccgcggg catctgctgc agcgatgaga gctgcgtggc
     1141 cgagcccgag tgtcgagagg gttttttccg cctcacccgc gctcgggagc agagcaacgc
     1201 cacgcagctg gacgggccag cccgggagct gctgcttagg ctggtacagc tggctgggac
     1261 acaagagtcc gtggattctg ccaagccccg ggtctactga gccatcgccc cccacgcctc
     1321 ccccctacag catggaaaat aaacttttaa aaaatgca
//
