LOCUS       NM_001136261            3525 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus ataxin 7-like 3B (Atxn7l3b), mRNA.
ACCESSION   NM_001136261
VERSION     NM_001136261.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3525)
  AUTHORS   Li,W., Atanassov,B.S., Lan,X., Mohan,R.D., Swanson,S.K.,
            Farria,A.T., Florens,L., Washburn,M.P., Workman,J.L. and
            Dent,S.Y.R.
  TITLE     Cytoplasmic ATXN7L3B Interferes with Nuclear Functions of the SAGA
            Deubiquitinase Module
  JOURNAL   Mol Cell Biol 36 (22), 2855-2866 (2016)
   PUBMED   27601583
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360194.98524.1,
                                        SRR26360172.2227986.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3525              JAXUCZ010000007.1  50208666-50212190   c
FEATURES             Location/Qualifiers
     source          1..3525
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q22"
     gene            1..3525
                     /gene="Atxn7l3b"
                     /note="ataxin 7-like 3B"
                     /db_xref="GeneID:100192313"
                     /db_xref="RGD:2301984"
     exon            1..3525
                     /gene="Atxn7l3b"
                     /inference="alignment:Splign:2.1.0"
     CDS             272..565
                     /gene="Atxn7l3b"
                     /note="putative ataxin-7-like protein 3B"
                     /codon_start=1
                     /product="ataxin-7-like protein 3B"
                     /protein_id="NP_001129733.1"
                     /db_xref="GeneID:100192313"
                     /db_xref="RGD:2301984"
                     /translation="MEEISLANLDTNKLEAIAQEIYVDLIEDSCLGFCFEVHRAVKCG
                     YFYLEFADTGSVKDFGIQPVEDKGACRLPLCSLPGEPGNGPQTELQRSPPEFQ"
ORIGIN      
        1 ggaagaagcc ggaacggctg ggtgaggcgc tgagacggtt tagcggcgag tcgttgctcg
       61 ggtgctgctc agaatcccga acgtgggtgt cgtcggagcc gtgcgagcgt tggggctccg
      121 gagcagcagt tactgtcgcc gcggacgccg ccgttgccga ccgggaggac gcggcctgga
      181 gaggccttgc aggcctagcg cggcccgcgg agcccgacga gtgtgccgtg agtagaccca
      241 gcgccctctg cacagtcgct taccaattaa gatggaggag atttcgttgg ccaacctgga
      301 tactaacaag ctggaggcca tcgcccagga gatctatgta gacctgatag aggattcctg
      361 cctgggattc tgctttgagg tgcaccgggc agtcaagtgt ggctacttct acctggagtt
      421 tgcagacact ggtagcgtga aggattttgg cattcagcca gtggaagaca aaggcgcatg
      481 ccgcctcccg ctttgctccc ttcctggaga acctgggaat gggccccaga cggagctgca
      541 gcgttcacct ccagaattcc agtagtcaca acatgagaga gggcgacagt gaccaggaca
      601 ataatataga ctggtcccgt ggcttggagg agtaagctaa gttggagaga aaaataaata
      661 aaaaagaaaa aagcaaacaa aagtctcatt tccacttaaa gatcttagca ttaaaacaca
      721 aaaacgaaaa caagaagacc aaaacaaaaa acccagagag gagaatttag gaattcgggt
      781 ccatttgaaa gagtatccag tgccagctca gaaatcctgg acaggagaag ggccagaggc
      841 tttatgatgt attttgagct ctataaatac acgtggatgt acaagatccc tgaactgccc
      901 tctgtacaca ggtgagcagc tgtgtaccca gcctataaaa ttcttttgtt tctcagattt
      961 tgcatctgat tgatgtcaag ggctccctgt gaagtttgga atctgtagat ggtcaggcca
     1021 tgatcagtca gcttcagtgg actgctcctc tgatttctaa gcctccaatt gggcctcttt
     1081 gatacaaatg caagtcaggt atgagactta aatactaaaa atattaattc ccgtttgaaa
     1141 ttggtgggaa gcccttgtgc ccttgtctac aagaagttca gaatcacctg ttttcccaag
     1201 gtccagcatt ttgtgggaca aggcctcacc tttgactcat caaaagacct gtctttccat
     1261 cctactgagt ggcaaagatt tgggacaagg tggtttacaa cagctgaaga ttccgttttg
     1321 atgctatgag gatgaagtat acctctgcga ttgcatatca tctccacctg gaagactcat
     1381 gtcttgaatt atatactgtg gacataagtt tggtgggaca gtctttacct gcttttgagt
     1441 tactagtgat gtaggcagcc catgggtctg acttgatcat tatgacaggt cactgtcctc
     1501 cagtggtacc actgaactac agaaaggcat catggcaagc aggaggctgt ttgaaaattg
     1561 aaccagaagg aaactttcca tctgccttca gtaatgtgaa tgagtttaat gctaagagcc
     1621 ctgaaatagg cctggtttac ctggtatggt tgcagaatcc cgtcttaaat tgggcagtca
     1681 gacctctgct atggtgaata agattgtctc caccttccct gcccttacag ggaagggaag
     1741 tccgtcactt ggtcctcaga acctccttac agcaggggct gtgtttttct tgctgggagt
     1801 tggaaagttg ggaatatcct gactttggag gcaggtttag aagtaaacgg gaagtgagtg
     1861 gcatatcaaa actgttctgt tttagtccct aaatgggggc ttatggaggg tgggagtccg
     1921 gaggtgagca gaaaagaaag gtgctgcttt atttgaaatg ttttcttacc tcattctgtg
     1981 ccccagtaaa gggtccagcc tcatctgtct ggcctggcca tgttcctgtc actgctcccc
     2041 tgcctatctg gtgcagctca tgattccagg tgctgcttgc cactctaggt tttatcttga
     2101 ccagtttcag ctcatcttcc agtgctcctg ccctgaaacc tacacaagtt tcccttttcc
     2161 ctttcttgtt ctctaacttt ttaagtttct atgttggttt tgttttacct gttattatgg
     2221 aagccttaga ggagaatctc tcatggcttc ctctgtttgg attggaatgg gaaaataacg
     2281 aaaaaaattt cgtttgaatt tacaaggcag tgtcatgtct acatgtttct cttatataag
     2341 cctaccttgc tagtatatct ccctgccttg tcatgagttc tttcttccca ttgctacttg
     2401 gatactgcct ctaggactgc agaaccatga atgctggtat acacaggaag gagttggttc
     2461 tgctccactt ttctattcta tccttgttgt gtatgtatgt atcttccttc tcccaggacc
     2521 tatttgaact gtatggacta atttggatta ctgtactcaa gagttaagga aactatagtg
     2581 cttgggcctt gagactatct gttattgcct tctcagagtt ttacaactca gggttggggc
     2641 ctacttaaag tttggatcct tagtccaaga agattgagaa cttggaaaaa accttggcag
     2701 gagctaaaaa tacttttaaa agatacctta ctacattctt gaacatttaa tgaattctag
     2761 aaaaaaagca gtctcgagat tcctgcttat gtaaagtact tgggaaacat gaaagggaga
     2821 aaggccatgg cccactcact cttgccttca gatagggagc tcaaatgtga ctttagtttt
     2881 cttgcctttt ctggttagaa cataaagatg tgggtggtag tttggggtaa tggtttgctc
     2941 atattacttc cctcttttta ttagtgtttt tgttttctgt ctcccatcat ttccattagg
     3001 accatagctc cccactctgt gtagataaaa ggtgggttca gtccagctat tatcgccctg
     3061 agggaacaaa ctaccttttt gggagcaaat gttctccatc atatagttga cagtggttag
     3121 gaactctccc cttcccctac ctttcctgta acaaaagaat tctatccttc cgcttcaatt
     3181 aattgtattg accgccctgt aatcctatta tgtatctgag tgtatgtata tgggggaaag
     3241 gggttcttta aattttctgt ggtttgtggt tttttccttc cataaattag ttgccaccac
     3301 cgcatgccca ggggctacta cctggcatta tcgcatgctg ggatcattgg gggagggtag
     3361 tgtgaggttc accactgtcc ttgttttgga gattcttatt ttttaataag taatccgtcc
     3421 tatacaaata gctaattaac tcttgtgttc cctgcccata tggctgctgg tgtaaataaa
     3481 ttgcattttc ccattgctaa acaataataa aattcaaaaa aaaca
//
