LOCUS       NM_001127526             977 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus all-trans retinoic acid-induced differentiation
            factor (Atraid), mRNA.
ACCESSION   NM_001127526 XM_001068870 XM_216650
VERSION     NM_001127526.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 977)
  AUTHORS   Ding,X., Chen,Y., Han,L., Qiu,W., Gu,X. and Zhang,H.
  TITLE     Apoptosis related protein 3 is a lysosomal membrane protein
  JOURNAL   Biochem Biophys Res Commun 460 (4), 915-922 (2015)
   PUBMED   25839652
REFERENCE   2  (bases 1 to 977)
  AUTHORS   Zou,X., Shen,J., Chen,F., Ting,K., Zheng,Z., Pang,S., Zara,J.N.,
            Adams,J.S., Soo,C. and Zhang,X.
  TITLE     NELL-1 binds to APR3 affecting human osteoblast proliferation and
            differentiation
  JOURNAL   FEBS Lett 585 (15), 2410-2418 (2011)
   PUBMED   21723284
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Apr 8, 2021 this sequence version replaced NM_001127526.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ214285.1, BC166904.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMN12840105 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-130               JAXUCZ010000006.1  31039650-31039779   c
            131-249             JAXUCZ010000006.1  31038877-31038995   c
            250-315             JAXUCZ010000006.1  31037117-31037182   c
            316-387             JAXUCZ010000006.1  31036859-31036930   c
            388-509             JAXUCZ010000006.1  31036528-31036649   c
            510-607             JAXUCZ010000006.1  31035755-31035852   c
            608-977             JAXUCZ010000006.1  31035194-31035563   c
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q14"
     gene            1..977
                     /gene="Atraid"
                     /gene_synonym="RGD1311605"
                     /note="all-trans retinoic acid-induced differentiation
                     factor"
                     /db_xref="GeneID:298841"
                     /db_xref="RGD:1311605"
     exon            1..130
                     /gene="Atraid"
                     /gene_synonym="RGD1311605"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..712
                     /gene="Atraid"
                     /gene_synonym="RGD1311605"
                     /note="p18 protein"
                     /codon_start=1
                     /product="all-trans retinoic acid-induced differentiation
                     factor precursor"
                     /protein_id="NP_001120998.1"
                     /db_xref="GeneID:298841"
                     /db_xref="RGD:1311605"
                     /translation="MASREPGSSVSPIPWAVTLLLVLGMERALALPEICTRCPGGVHN
                     LSRVAAYCEDTSKLMQARCCLNQKGTILGLDLQNCSLKDPNLFPAYTAVIIDLQANPL
                     KDDLTSTFHGFTQLQTLILPQDVHCPGGINAWDSVTSFMDKQICQGQKDLCNSTGSPE
                     MCPENGSCASDGPGLLQCVCADGFHGYKCMRQGSFSLLMFFGILGSTTLAISILLWGT
                     QRRKAKAS"
     exon            131..249
                     /gene="Atraid"
                     /gene_synonym="RGD1311605"
                     /inference="alignment:Splign:2.1.0"
     exon            250..315
                     /gene="Atraid"
                     /gene_synonym="RGD1311605"
                     /inference="alignment:Splign:2.1.0"
     exon            316..387
                     /gene="Atraid"
                     /gene_synonym="RGD1311605"
                     /inference="alignment:Splign:2.1.0"
     exon            388..509
                     /gene="Atraid"
                     /gene_synonym="RGD1311605"
                     /inference="alignment:Splign:2.1.0"
     exon            510..607
                     /gene="Atraid"
                     /gene_synonym="RGD1311605"
                     /inference="alignment:Splign:2.1.0"
     exon            608..977
                     /gene="Atraid"
                     /gene_synonym="RGD1311605"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagctgtcaa gaagcttgaa agcagtggaa aatggcgtct cgggagccag gcagttctgt
       61 gagcccgata ccttgggcgg ttaccctgct cctggttcta ggcatggaaa gggccctggc
      121 tctacctgag atatgcaccc ggtgtccagg aggtgtgcac aatttgtcca gagtagctgc
      181 ttactgtgag gatacatcga agctaatgca ggcccgatgc tgcctgaacc agaagggcac
      241 catcttgggg ctagaccttc agaactgttc cctgaaggat ccgaaccttt tcccagctta
      301 tactgctgtc atcatagacc ttcaagcaaa ccctctcaag gatgacttga ccagcacctt
      361 ccatggattt actcagctgc agactctgat actaccacaa gatgtccact gtcctggagg
      421 tattaatgcc tgggacagtg ttacttcttt catggacaag cagatttgcc aagggcaaaa
      481 ggacctttgt aatagcaccg gaagcccaga aatgtgtcct gagaatgggt cttgtgcgtc
      541 tgatggtcca ggtcttttgc aatgcgtttg tgccgatggt ttccatggat acaagtgtat
      601 gaggcagggc tcattttcac tgctcatgtt ctttgggatt ctgggatcca ccacgctagc
      661 catctccatt ctactttggg gaacccagcg ccggaaggcc aaggcttcat gaatcacaca
      721 agacttccag ctcacctgac tgagcaccct gtcgatcgag tcccggtcgc gtcgcagcca
      781 ggaagacttt acttcgttga caaacagtac aggccagtga gcgaccggct taaggctgaa
      841 gcggcctttg ataatgaaag aagatgtcaa attgcaccgc ctcgggggtc ttgtggacac
      901 ttggttctgg agtggactag tactaatttg tattattgac aacaataaac acctttttcc
      961 ccagtgtttt tagggaa
//
