LOCUS       XM_234937               4429 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ATPase phospholipid transporting 8B3
            (Atp8b3), transcript variant X1, mRNA.
ACCESSION   XM_234937
VERSION     XM_234937.10
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_234937.11.
            
            On Jan 21, 2021 this sequence version replaced XM_234937.9.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4429
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4429
                     /gene="Atp8b3"
                     /note="ATPase phospholipid transporting 8B3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:299616"
                     /db_xref="RGD:1307622"
     CDS             163..4185
                     /gene="Atp8b3"
                     /codon_start=1
                     /product="phospholipid-transporting ATPase IK isoform X1"
                     /protein_id="XP_234937.3"
                     /db_xref="GeneID:299616"
                     /db_xref="RGD:1307622"
                     /translation="MDDAHLEEDLEDKDTEFTWEVKANDRAYHKQFRKKGFLCWRQKK
                     YKSNAIHTAKYNVFSFLPLNLYEQFRRVSNLYFLFIIILQSIPEISTLPWFTLFAPLV
                     CLLMIRAARDLVDDIGRHRSDRIINNRPCQILKGKSFLWKKWKNLCVGDVVCLSKDNI
                     VPADLLLLASTEPSSLCYLETADIDGETNLKFRQALMVTHHELTSPKKMASFQGIVTC
                     EEPNSRMHHFVGSLEWNSRKYPLDIGNLLLRGCKIRNTDTCYGLVIYAGLDTKIMKNC
                     GKIHLKRTKLDLMMNKLVILIFMSLVIASMFLTLGFAFMVKEFKAKHHYMSSMQGRTD
                     AMDSFFIFWGFLILLSVMVPMAMFIIAEFIYLGNSIFINWDLSMYYEPLDIPAKARST
                     SLNDHLGQVQYIFSDKTGTLTQNIMTFKKCCINGCTYDSDDEHGTLRKRNPYSWNPFA
                     DGKLQFYNKELESLVRGKQDRAVQEFWRLLAICHTVMVQEKDNQLLYQAASPDEEALV
                     AAARNFGYVFLSRTQDTITLVELGEERVYQVLAMMDFNSVRKRMSVLVRNPEGSICLY
                     TKGADTVILERLHHKGVMEATTEEVLAAFAEQTLRTLCLAYKDVAEDAYKEWEPEHQE
                     AALLLQNRAQALHQVYNKLEQNLQLLGVTAIEDKLQDGVPETIRCLKKGNIKMWVLTG
                     DKPETAVNIGFACQLLSENMSILEDKDIKGLLENYWDENEHQRAFQTMTHHNMALVIN
                     GEFLDQLLLSLRKEPRALVQNAVVDEATQEPGVSALDFLQARRISQMWRNFGTTMATS
                     QSDASKTRESPEERRERAFVDLASKCQAVICCRVTPKQKALVVALVKKYQQVVTLAIG
                     DGANDVNMIKTADIGVGLAGQEGMQAVQNSDYVLAQFCYLQRLLLVHGRWSYMRICKF
                     LRYFFYKTVASMMAQIWFSLFNGFSAQPLYEGWFLALFNLLYSTLPVLYIGLFEQDVT
                     AEKSLKMPELYTAGQKDELFNYSIFVQAIAHGTITSLINFFVTILVSYDMTKTGSSPD
                     YQSFGVLVAISSLLSITLEVILVVKYWTLLFVGTVVVSLSSYVIFTSLTESLLLFRIS
                     PKTFPFLFADYNVIREPSSLLVIVLNVTLNTLPMLAVRIIRRTVLKRHPKKEEEVPSE
                     ELTVEPAMRLRRGMPARRSSYAFSHHEGYANLITQGTILRRHTHVDEFYGDTACNSPN
                     PSEEDVPWQHKESIFNPRKISILAKKRRQHYGKGSQGEVHPNASSQTTEKQTAINIDN
                     HETKKLPTTTSAMSGQLQVSSSEDQAFYSALSQYSLASRPERMDVRSSSWKGPLLRDS
                     ASSRSSHLEVTTQLHSHTSS"
ORIGIN      
        1 ccgccccctt cacaatgccc cgccccacga gcccgcgccg cccgtttctg accggttggc
       61 accaggctaa cagctccaca acatcgttgg ccctggacgc cgctggcggc ccgccctagg
      121 cagccaggcc ccactaagcc cagccctcgc agccccacca gcatggatga tgctcacctt
      181 gaggaggacc tcgaggataa agacacagag ttcacctggg aggtgaaggc caatgaccga
      241 gcctaccaca agcagttcag gaagaagggc ttcctgtgct ggaggcagaa gaagtacaag
      301 agcaacgcca tccacactgc caaatacaat gtcttctcct tcctgcctct gaacctgtac
      361 gagcagttcc gtcgtgtgtc caatctctac ttccttttca tcatcatcct gcagagcatc
      421 ccggagatct ccacactgcc ctggttcacg ctctttgcgc ctctggtctg cctgctcatg
      481 atccgggccg cccgtgacct ggtggatgac attggtcgac acaggagcga tagaatcatc
      541 aacaacaggc cttgccagat cctgaagggg aagagtttcc tgtggaagaa atggaagaat
      601 ctatgtgtgg gggatgtggt gtgtctcagc aaagacaaca ttgtcccggc agacttgctc
      661 ctgctcgcca gcacagagcc cagtagcctg tgctacctgg aaacggcaga catcgatgga
      721 gagaccaact tgaagttcag gcaggctctg atggtcacac accatgaact tactagcccg
      781 aagaaaatgg cttccttcca gggcatagtg acatgtgagg aacccaacag ccggatgcat
      841 cattttgtgg ggagcctgga atggaacagc aggaagtacc cgttggacat tggaaacctc
      901 ctcctgcggg gctgtaagat ccgcaacaca gacacctgct atggcctggt catctatgct
      961 ggtttagaca caaagatcat gaagaattgt ggcaagattc atctgaagag gaccaagctg
     1021 gacctgatga tgaacaagct ggtgatcttg atcttcatgt cactggtgat tgcttccatg
     1081 tttctaacac tgggcttcgc cttcatggtg aaagagttta aagccaagca tcactacatg
     1141 tcatcgatgc aagggcgcac ggacgcaatg gactccttct tcatcttctg gggcttcctc
     1201 atcttgctca gcgttatggt gcccatggcc atgtttatca tcgccgaatt catctactta
     1261 ggcaacagca ttttcatcaa ctgggacctc agtatgtact atgagcccct ggacataccg
     1321 gccaaggccc gcagcaccag tctgaatgac cacctgggcc aggtgcagta catcttctca
     1381 gacaagaccg ggacgctgac acagaacatc atgaccttca agaagtgctg tatcaatggc
     1441 tgtacctatg attcagacga cgagcacggg acactccgaa agcggaaccc atattcctgg
     1501 aacccattcg ctgacggcaa actccagttc tacaataaag agctggaatc cctggtgcga
     1561 ggcaagcagg accgagcagt acaggagttc tggcggctgc tggccatctg ccacaccgtg
     1621 atggtgcagg agaaagacaa ccagctgctg taccaggctg cctcccctga tgaggaggca
     1681 ctggtcgccg ctgcccggaa ctttggctac gtgtttctgt ctcggaccca ggacacgatc
     1741 accctggtgg agctggggga agaaagggtc taccaggttc tggccatgat ggatttcaac
     1801 agcgttcgca aacggatgtc agtgttagtc cgaaacccag agggctccat ctgcctctat
     1861 accaagggtg ccgacacggt catcttggag cgtcttcacc ataagggtgt catggaggcc
     1921 accacagagg aggtcttggc tgcctttgca gagcagaccc tgcgcaccct gtgcctggcc
     1981 tacaaggatg tggcggagga tgcctacaaa gaatgggaac cggaacacca ggaggccgcc
     2041 ctcctgctgc agaaccgcgc gcaggccctg caccaggtgt ataataagct ggagcagaac
     2101 ctgcagctgc tgggagtcac agccattgaa gacaaactgc aagatggtgt ccctgagact
     2161 atcagatgcc tcaagaaggg gaacatcaaa atgtgggtgc tgaccgggga caagccagag
     2221 accgcggtga acatcggctt tgcgtgccag ctgctgtcag aaaacatgtc aattctggaa
     2281 gataaggaca tcaaaggttt actggagaac tattgggacg aaaatgaaca ccagagggca
     2341 ttccagacga tgacccatca caacatggcc ttggttatca atggagaatt cttggatcag
     2401 ctgctcctgt ccttgcgcaa ggagccccga gccctggtcc agaatgcagt ggtggatgag
     2461 gccacccagg agccgggtgt gtctgcgtta gacttcctcc aggcacggag gatctcccag
     2521 atgtggagaa actttgggac caccatggca acatcccagt cagacgcctc caagactcga
     2581 gagagccccg aggagcggag ggagagggcc tttgtagacc tggcctccaa atgccaggct
     2641 gtcatctgct gcagggtgac acccaagcag aaggcccttg tggtggcatt ggtgaagaaa
     2701 taccagcaag tggtgacgct ggccatcgga gacggagcca acgatgtgaa catgatcaag
     2761 actgcggaca ttggcgtagg gctggcgggc caggagggca tgcaggcggt tcagaacagt
     2821 gactacgtgc tggcccagtt ctgctacctg cagcgcttgc tgcttgtgca cgggcgctgg
     2881 tcctacatgc gaatctgcaa gttcctgcgc tacttcttct acaagaccgt ggccagcatg
     2941 atggcccaga tatggttctc cctgttcaac ggcttctctg ctcagcccct gtatgaaggc
     3001 tggttcctgg ctctctttaa cctgctgtat tccacgctcc cagtcctgta cattggtctg
     3061 tttgagcagg acgtgactgc agagaagagt ctaaagatgc ccgaactgta cacggctggc
     3121 cagaaagacg agctcttcaa ctacagtatt ttcgtgcaag ccatcgccca cggcaccatc
     3181 acatccctga tcaacttctt tgtgacgatt ttggtcagct atgacatgac caagactggc
     3241 agctcccctg actaccagtc ctttggggta ctggtggcca tatctagcct actgtcaatc
     3301 accctggagg ttatccttgt cgtcaagtac tggacgctcc tgttcgtggg caccgttgtg
     3361 gtcagcctca gctcctacgt aatcttcacg agcctcactg agagtctatt gttgttcagg
     3421 atctcaccaa agaccttccc attcctgttc gctgactaca atgtgatccg tgagccctcc
     3481 agcctgctgg tgattgtcct caatgtgacc ctgaacactc tgcccatgct ggctgtgcgc
     3541 atcatccgaa ggacggtctt gaaacggcac cccaagaaag aagaggaggt cccaagtgaa
     3601 gaattaacag tggagcccgc catgcggctt cgccgtggga tgccagcccg ccgctccagc
     3661 tatgccttct cccaccatga gggctacgca aacctcatta cccagggcac catcctgcgc
     3721 aggcatacgc acgtggatga attttatggg gacacagcct gcaattcccc gaacccatcc
     3781 gaagaagacg taccttggca acacaaagaa tcaatattta atccgcgaaa gatctcaatc
     3841 ctggccaaga agagacgcca gcactacgga aaggggtctc agggagaggt ccaccccaac
     3901 gctagctccc agaccacgga gaaacagacc gccattaaca tagacaacca tgagactaag
     3961 aagctaccca ccaccacaag tgccatgtca ggacagctcc aggtgtcctc gtctgaggat
     4021 caggctttct acagtgcgct ttcacagtac agtctggcaa gccggccgga acgcatggat
     4081 gtccggtcct catcctggaa gggccctctc ttgagggatt cagcctcttc gaggtcaagc
     4141 catctggaag taaccacaca gctacatagc cacacctcca gttgaccaga agcctctcac
     4201 tgggggattc ccagtcgtca aggacaatgc cacagtcacc cgggagtgga cagagcccta
     4261 acgtggaaca agcgcagtct cccatggtgc gcatgtcagt gcgccttcaa gtcagatcac
     4321 cacgcagctc acgtgcttag ccagtcaacg aacagcatcc aaagacaaga ggaggggcac
     4381 atccttgcct ttttctaata aaacagggtc cctctggccg cagggcttc
//
