LOCUS       NM_001416612            5524 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus ATPase phospholipid transporting 8B2 (Atp8b2),
            mRNA.
ACCESSION   NM_001416612 XM_039103775
VERSION     NM_001416612.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5524)
  AUTHORS   van der Velden,L.M., Wichers,C.G., van Breevoort,A.E.,
            Coleman,J.A., Molday,R.S., Berger,R., Klomp,L.W. and van de
            Graaf,S.F.
  TITLE     Heteromeric interactions required for abundance and subcellular
            localization of human CDC50 proteins and class 1 P4-ATPases
  JOURNAL   J Biol Chem 285 (51), 40088-40096 (2010)
   PUBMED   20947505
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000002.1.
            
            On Feb 13, 2023 this sequence version replaced XM_039103775.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360190.2453137.1,
                                           SRR26360172.2353479.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-183               JAXUCZ010000002.1  177699393-177699575 c
            184-269             JAXUCZ010000002.1  177697343-177697428 c
            270-336             JAXUCZ010000002.1  177697132-177697198 c
            337-395             JAXUCZ010000002.1  177695073-177695131 c
            396-509             JAXUCZ010000002.1  177694639-177694752 c
            510-608             JAXUCZ010000002.1  177694419-177694517 c
            609-670             JAXUCZ010000002.1  177694111-177694172 c
            671-743             JAXUCZ010000002.1  177693940-177694012 c
            744-814             JAXUCZ010000002.1  177693444-177693514 c
            815-894             JAXUCZ010000002.1  177693158-177693237 c
            895-1053            JAXUCZ010000002.1  177690822-177690980 c
            1054-1142           JAXUCZ010000002.1  177690570-177690658 c
            1143-1339           JAXUCZ010000002.1  177688847-177689043 c
            1340-1548           JAXUCZ010000002.1  177686129-177686337 c
            1549-1592           JAXUCZ010000002.1  177685262-177685305 c
            1593-1758           JAXUCZ010000002.1  177684678-177684843 c
            1759-1947           JAXUCZ010000002.1  177684361-177684549 c
            1948-2063           JAXUCZ010000002.1  177684132-177684247 c
            2064-2228           JAXUCZ010000002.1  177683060-177683224 c
            2229-2340           JAXUCZ010000002.1  177682862-177682973 c
            2341-2446           JAXUCZ010000002.1  177682631-177682736 c
            2447-2591           JAXUCZ010000002.1  177682375-177682519 c
            2592-2775           JAXUCZ010000002.1  177681933-177682116 c
            2776-2999           JAXUCZ010000002.1  177681431-177681654 c
            3000-3083           JAXUCZ010000002.1  177680553-177680636 c
            3084-3329           JAXUCZ010000002.1  177680059-177680304 c
            3330-3468           JAXUCZ010000002.1  177679786-177679924 c
            3469-3599           JAXUCZ010000002.1  177678376-177678506 c
            3600-5524           JAXUCZ010000002.1  177676208-177678132 c
FEATURES             Location/Qualifiers
     source          1..5524
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..5524
                     /gene="Atp8b2"
                     /note="ATPase phospholipid transporting 8B2"
                     /db_xref="GeneID:685152"
                     /db_xref="RGD:1597731"
     exon            1..183
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            184..269
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            270..336
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     CDS             306..3878
                     /gene="Atp8b2"
                     /EC_number="7.6.2.1"
                     /note="ATPase, class I, type 8B, member 2; ATPase,
                     aminophospholipid transporter, class I, type 8B, member 2;
                     Probable phospholipid-transporting ATPase ID-like"
                     /codon_start=1
                     /product="phospholipid-transporting ATPase ID"
                     /protein_id="NP_001403541.1"
                     /db_xref="GeneID:685152"
                     /db_xref="RGD:1597731"
                     /translation="MALCAKKRPPEEERRARANDREYNEKFQYASNCIKTSKYNILTF
                     LPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYF
                     RHKSDNQVNSRHSQVLINGVLQQEQWMNVCVGDIIKLENNQFVAADLLLLSSSEPHGL
                     CYIETSELDGETNMKVRQAIPVTSELGDISQLAKFDGEVICEPPNNKLDKFSGALYWK
                     GNKFPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTL
                     VLWIFGFLVCMGVILAIGNAIWEHEVGTRFQVYLPWDEAVDSAFFSGFLSFWSYIIIL
                     NTVVPISLYVSVEVIRLGHSYFINWDKKMFCMKKRTPAEARTTTLNEELGQVEYIFSD
                     KTGTLTQNIMVFNKCSINGHSYGDVFDVLGHKAELGERPEPVDFSFNPLADKKFLFWD
                     PSLLEAVKMGDPHTHEFFRLLSLCHTVMSEEKNEGELYYKAQSPDEGALVTAARNFGF
                     VFRSRTPKTVTVHELGTSITYQLLAILDFNNIRKRMSVIVRNPEGKIRLYCKGADTIL
                     LDRLHPSTQELLNSTTDHLNEYAGDGLRTLVLAYKDLDEEYYEEWARRRLQASLAQDS
                     REDRLASIYEEVESDMMLLGATAIEDKLQQGVPETIALLTLANIKIWVLTGDKQETAV
                     NIGYSCKMLTDDMTEVFIVTGHTVLEVREELRKARKKMVDSSHAVGNGFTYQGNLSSS
                     KLTSVLEAVAGEYALVINGHSLAHALEADMELEFLETACACKAVICCRVTPLQKAQVV
                     ELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRL
                     LLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYT
                     SLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIP
                     YGVFAEATRDDGTQLADYQSFAVTVATSLVIVVSVQIGLDTGYWTAINHFFIWGSLAV
                     YFAILFAMHSNGLFDMFPNQFRFVGNAQNTLAQPTVWLTIVLTTAVCIMPVVAFRFLR
                     LSLKPDLSDTVRYTQLVRKKQKAQHRCMRRVGRTGSRRSGYAFSHQEGFGELIMSGKN
                     MRLSSLALSSFSTRSSSSWIESLRRKKSDSANSPSGGAEKPLKG"
     exon            337..395
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            396..509
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            510..608
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            609..670
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            671..743
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            744..814
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            815..894
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            895..1053
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1054..1142
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1143..1339
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1340..1548
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1549..1592
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1593..1758
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1759..1947
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1948..2063
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2064..2228
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2229..2340
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2341..2446
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2447..2591
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2592..2775
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2776..2999
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            3000..3083
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            3084..3329
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            3330..3468
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            3469..3599
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
     exon            3600..5524
                     /gene="Atp8b2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acttccgccc cgcggccgaa actgacacaa agtagcgggc cggggccccg gggggtgggc
       61 aggagagccc ggctgctgtg gggggcggga gcctgcgggc agcggagccg agcgcccccg
      121 ccccagcccc cggcatgggc cggacggggc cgccgggcgg agcgccgagc gcggagcgct
      181 aaggcccttc ccgataggct ttggcttctg taaattttca gtcccctcat gttatccagg
      241 acagtgggaa gaccttcctt tcctctcagg gtctcccatg gattgctgga accttgctgg
      301 gtgagatggc actgtgtgca aaaaagcgcc ccccagaaga agagcggagg gcacgggcta
      361 atgaccgtga atacaatgag aaattccagt atgcaagtaa ctgcatcaag acctccaagt
      421 acaatattct caccttcctg cctgtcaacc tttttgagca gttccaggaa gttgccaaca
      481 cctacttcct gttccttctc attctgcagt taatccccca gatctcgtcc ctgtcctggt
      541 tcaccaccat tgtgcctttg gttctcgtcc ttaccatcac agctgttaaa gatgccaccg
      601 atgactattt ccgccacaag agtgataacc aggtgaatag ccgtcattct caggtgctga
      661 tcaatggagt tctccaacaa gagcaatgga tgaatgtatg cgttggtgat attatcaagc
      721 tagaaaataa ccagtttgtg gcggcggacc tcctcctcct ttccagcagc gagccccacg
      781 ggctgtgcta catagagacc tcggaactgg atggagagac caacatgaaa gtgcgccagg
      841 caattccagt cacctcggag ctgggggata tcagtcagct ggccaagttt gatggcgaag
      901 tcatctgtga accacccaac aacaagctgg acaagttcag tggagcactg tactggaagg
      961 ggaacaaatt ccccctgagc aaccagaaca tgctgctgcg tggctgtgtg ctgagaaaca
     1021 ccgagtggtg cttcgggctc gtcatctttg caggtcctga tactaagctg atgcagaaca
     1081 gtggcaggac gaagttcaag agaacaagca tcgaccgcct gatgaacaca ctggtactct
     1141 ggatttttgg attcctggtt tgcatgggtg tgatcctggc catcggtaat gccatctggg
     1201 agcacgaagt tgggacgcgc ttccaggtct acctgccctg ggatgaggct gtggacagtg
     1261 ccttcttctc tggcttcctc tccttctggt cctatatcat cattctcaac accgttgtgc
     1321 ccatttcact gtatgtcagt gtggaggtca tccgtttggg ccacagttac ttcatcaact
     1381 gggacaagaa gatgttctgt atgaagaagc ggactcctgc agaggcccgt accaccactc
     1441 tgaacgaaga gctgggccag gtggagtaca tcttctctga taagacgggc accctgaccc
     1501 agaacatcat ggtgttcaac aagtgctcca tcaatggcca cagctacggt gacgtatttg
     1561 atgtcttggg acacaaggct gaattgggag agagaccaga acctgttgac ttctccttta
     1621 atcctctggc tgacaagaaa ttcttgtttt gggacccaag cctcttggag gctgtcaaga
     1681 tgggggaccc ccacacacat gagttcttcc gtctcctctc cttgtgtcac acggtcatgt
     1741 cagaagagaa gaacgaagga gagctgtact acaaagctca gtctccggat gagggggctt
     1801 tggtcaccgc agccaggaac tttggctttg tgttccgctc tcgtacccct aaaacagtca
     1861 ccgtccatga gctcggtacg tccatcacct accagctgct ggccatcttg gactttaaca
     1921 acattcgcaa gaggatgtcg gtcatagttc ggaatccaga ggggaagatt cgactctact
     1981 gcaaaggggc tgacacaatc ctgctggaca ggctccaccc ctctacccag gagctgctca
     2041 acagcaccac cgaccacctg aatgagtatg caggggatgg gctgaggacc ctggtattgg
     2101 cctacaaaga cctggatgaa gaatactatg aggaatgggc ccggagacgc ttgcaggcta
     2161 gcctggccca agacagccga gaggacaggc tggccagcat ctatgaggag gttgagagtg
     2221 acatgatgct gctgggtgcc acagccattg aggacaagct tcagcaggga gttccagaga
     2281 ccattgccct cttgactctg gccaacatca agatttgggt gctaactgga gataagcaag
     2341 agacagctgt gaacatcggc tactcctgta agatgctgac tgacgacatg acagaggtgt
     2401 tcatagtcac aggccacact gtcctggaag tgcgagagga gctcaggaaa gcccggaaga
     2461 agatggtaga ttcctcccat gctgtgggca atggcttcac ctaccagggg aacctttctt
     2521 cttcaaagct cacttctgtc ctggaggctg ttgctgggga gtacgccttg gtcatcaacg
     2581 ggcacagcct ggcccatgcc ttggaggctg atatggagct agagtttctg gagacagcat
     2641 gcgcctgcaa agctgtcatc tgctgccggg taacaccctt gcagaaagca caagtggtgg
     2701 aactggttaa gaagtacaag aaggcagtga cacttgccat tggggatggg gccaatgatg
     2761 tcagcatgat taaaactgct cacattggtg tgggtatcag tgggcaggaa gggatccagg
     2821 ctgtcctggc ttccgattat tccttttcac agttcaagtt cctgcaacgc ctcctgctgg
     2881 tgcacgggcg ctggtcctac ctgcgcatgt gcaagttcct ctgctatttc ttctacaaga
     2941 actttgcgtt caccatggtc cacttctggt ttggcttctt ctgcggtttt tcagcccaga
     3001 ccgtttatga ccagtatttc atcaccctgt ataacatcgt gtacacctcc ctcccagtcc
     3061 tggccatggg cgtctttgac caggatgttc cagagcagcg aagcatggag taccctaagc
     3121 tgtatgagcc tggccagctg aacctcctat tcaacaagcg agagttcttc atctgcatcg
     3181 cccagggcat ctacacctct gtgctcatgt tcttcattcc ttatggggtg tttgccgagg
     3241 ccacccggga tgatggcacc cagctggcag actaccagtc cttcgcagtc actgtggcca
     3301 catcgctggt cattgtggtc agtgtgcaga ttgggctgga tacaggctat tggacagcca
     3361 tcaaccactt tttcatctgg ggcagcctcg cagtttactt cgccatcctc tttgccatgc
     3421 acagcaatgg gctctttgac atgtttccaa accagttccg gtttgtgggg aatgcccaga
     3481 acaccctggc ccagcccacc gtgtggctca ccatcgtgct caccacggct gtctgcatca
     3541 tgcctgtggt tgccttccgc ttcctcaggc ttagcctgaa gccggatctc tccgacacgg
     3601 tccgctacac tcagctggta aggaagaagc agaaggctca gcaccgctgc atgcggcgag
     3661 tgggccgcac cggctctcgc cgctctggct atgcgttctc gcaccaggaa ggttttgggg
     3721 agctcattat gtctggcaag aacatgcggc tcagctcctt ggccctctcc agcttcagca
     3781 cacgctccag ctccagctgg atcgagagcc tgcgcaggaa gaaaagtgac agtgccaaca
     3841 gccccagtgg cggagctgag aagcccctca agggctgaag atctgggctg agaccccctg
     3901 cgtcggggat cagagctcac agagccagcg tctggaaact gctggccttc catgcagcct
     3961 gccgcctctc tgcctggtgg actgctctgt tggtctcacc agtttttaga agtggaggaa
     4021 gtgggcctca ggggcagcac tggttcaggc cttgaatggg gcaacagtga gggacaagat
     4081 atggaaccaa aaaaacatga aaaaagaact gtgagattgg gtccatccct gtcctgcttg
     4141 gagtccacag ggagactgta atctccatat ttttttactc tattccccag agggcccttg
     4201 tgcccttgtt cctgaattac acaagaatgt atcacgccgg gaagccagag acctgctggg
     4261 gcctccaagc ccctcatatc atcgtatgtc ctcttggttt atgtttgtgt tgtttggttt
     4321 tgtctttttt atttggtaag tggaggaggc cttcatgcga ctttacgtta tggttagtat
     4381 cttaactctc ctgggaagag gggactggca cacactggga tgtcctcgct ggtggagtgg
     4441 ctgggagggc cacaccttac ttttagggtg ccagtgtcct gatgggacac aggagctacc
     4501 agacagggaa gaactgtcag caagagaatg ttgggagaac agaaaggaag catagtgctg
     4561 tggcctcccc agggcacaca tacgggtcct tggatctcct aagtcctgct aatgctggac
     4621 tagagcccag acagcggctc catcattttc agtgagctgt agccgagaat gaagtctagt
     4681 cctgagacca gagatagggt ttttggattc taaattgagt ccccagttcc ttagctactc
     4741 acttccaact tcccttcctt cctacccctc cttatccggt gctttttcta ccttaccctg
     4801 aggtgagact gaaaggggaa gatgacctct gctgctttgg cccagtaacc tagggctttg
     4861 tcctctggct tagcctccag caagtgtggt aggaggtaga taaaacctgt tcagaccact
     4921 tgctcggtct ggacagagcg tctttggacc ctttttacag cccgctgtcc gagtcaggta
     4981 catactgagg tagtttctgc cttgtcgctt ccagaagact ctcttcctct tatttgccag
     5041 cagcagacta agggaggagg aatggtgtgg agctgggagt gggggacatg ggaatctaga
     5101 tattccatgc attgccccag aggagttgga ggtgggctgc agggaagtgg gtgccaggat
     5161 ggcaggaagg aaggggagga caagactggg aaatcccttt ggccacacag tttacaagcc
     5221 cagtatcatg tctgtttgtg tgtctcttaa aaggaaagtc tgatttttat accaaagagg
     5281 aaatgatttt ttttgtattt ggtttgtcta tattatataa atacatatta tatatatata
     5341 tatatagcta tatatatatt attttttgtt ctctctcatt ttttagggag ggaggaaagt
     5401 accacattgc attgagctgt aattaaggaa cattctgtat aatttatgac atttctataa
     5461 ttgcaaaaat tatatcattt tatggatata aaagaaaaat gcctttttat aaaattccaa
     5521 tttc
//
