LOCUS       NM_212490               1465 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus ATPase H+ transporting V1 subunit G2 (Atp6v1g2),
            mRNA.
ACCESSION   NM_212490 XM_347384
VERSION     NM_212490.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Abbas YM, Wu D, Bueler SA, Robinson CV and Rubinstein JL.
  TITLE     Structure of V-ATPase from the mammalian brain
  JOURNAL   Science 367 (6483), 1240-1246 (2020)
   PUBMED   32165585
REFERENCE   2  (bases 1 to 1465)
  AUTHORS   Sun-Wada GH, Yoshimizu T, Imai-Senga Y, Wada Y and Futai M.
  TITLE     Diversity of mouse proton-translocating ATPase: presence of
            multiple isoforms of the C, d and G subunits
  JOURNAL   Gene 302 (1-2), 147-153 (2003)
   PUBMED   12527205
REFERENCE   3  (bases 1 to 1465)
  AUTHORS   Murata Y, Sun-Wada GH, Yoshimizu T, Yamamoto A, Wada Y and Futai M.
  TITLE     Differential localization of the vacuolar H+ pump with G subunit
            isoforms (G1 and G2) in mouse neurons
  JOURNAL   J Biol Chem 277 (39), 36296-36303 (2002)
   PUBMED   12133826
REFERENCE   4  (bases 1 to 1465)
  AUTHORS   Lambracht-Washington D and Fischer Lindahl K.
  TITLE     Does the rat have an H2-D orthologue next to Bat1?
  JOURNAL   Immunogenetics 53 (12), 1039-1046 (2002)
   PUBMED   11904681
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX883046.1.
            
            On Oct 2, 2009 this sequence version replaced NM_212490.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB760874.1, FQ212959.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-271               BX883046.1         84382-84652
            272-372             BX883046.1         84936-85036
            373-1465            BX883046.1         85503-86595
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..1465
                     /gene="Atp6v1g2"
                     /gene_synonym="ATP6G; Atp6g2; NG38"
                     /note="ATPase H+ transporting V1 subunit G2"
                     /db_xref="GeneID:368044"
                     /db_xref="RGD:1303186"
     exon            1..271
                     /gene="Atp6v1g2"
                     /gene_synonym="ATP6G; Atp6g2; NG38"
                     /inference="alignment:Splign:2.1.0"
     CDS             190..546
                     /gene="Atp6v1g2"
                     /gene_synonym="ATP6G; Atp6g2; NG38"
                     /EC_number="7.1.2.2"
                     /note="vacuolar ATPase NG38; ATPase, H+ transporting, V1
                     subunit G; ATPase, H+ transporting, lysosomal V1 subunit
                     G2; lysosomal ATPase"
                     /codon_start=1
                     /product="V-type proton ATPase subunit G 2"
                     /protein_id="NP_997655.1"
                     /db_xref="GeneID:368044"
                     /db_xref="RGD:1303186"
                     /translation="MASQSQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEV
                     EQYRREREQEFQSKQQAAMGSQGNLSAEVEQATRRQVQGMQSSQQRNRERVLTQLLGM
                     VCDVRPQVHPNYRITV"
     exon            272..372
                     /gene="Atp6v1g2"
                     /gene_synonym="ATP6G; Atp6g2; NG38"
                     /inference="alignment:Splign:2.1.0"
     exon            373..1465
                     /gene="Atp6v1g2"
                     /gene_synonym="ATP6G; Atp6g2; NG38"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaggaggac cagtcatcgg tgtgaggatg agacacccac ccggtgcagg agactgagtg
       61 aaaacgggag cactaagacc cagggggagt ggaggatcgc atcaagggac cggaggagta
      121 ggcgctggag ggtgggagcc gactggtacc ttggtcgcct tcggaacagc atcttctcta
      181 gtgacaaaaa tggccagtca gtcccagggt atccagcagc tcctccaggc tgagaagcgg
      241 gcagcggaga aggtggccga tgccaggaag aggaaggccc ggcgactgaa gcaggcgaag
      301 gaggaggctc aaatggaggt ggagcaatac cgcagggagc gagagcagga gttccagagc
      361 aagcagcagg cggccatggg ctctcagggg aacctgtctg ctgaggtgga gcaggccacg
      421 agacgtcagg ttcagggcat gcagagctcc cagcagagaa atcgggagcg agtcctgact
      481 cagcttcttg gcatggtctg tgacgtcaga ccccaggtcc accccaacta tcggattact
      541 gtctagaacc cttgcttagg gacacatccc tagagtgact ccttctatca gcaaaaccac
      601 ccgtgtcgca tgcacagagc cctgggctca atccatagca ccatccccca cctaccgcca
      661 aatctacctg gcaggttcta atattctccc catgagacgt acaaatagcc tgttcagacc
      721 ggaatctctg cgtcccatga catctactgg aattatacta acgaatgtcc aagccatccc
      781 caccagatgg atccctctga gaaatgtatg tcgtggtgat ggggagtgtg aaaagcaccc
      841 tgatttcaga gctggccgac ttctgttcct ctctcacccc tgttccttgc tggctgcaca
      901 actgggacaa gctgtttaac ctggaagcct cggtgtcctc atctttgtag ctggagtgac
      961 agtgacaatg gattgctttg taaggaggct gcctcgagtc atcctatgag agttcagcat
     1021 agttccagat gggtagtggc tgtggttgga taaatggcta gcctgtacta cgaccgcact
     1081 ctgcttgcct gccagaatcc taattctgtt tcctgacatt ctagctttgc ttagtcactg
     1141 taactctagt aatcctctga gaaatttgtt tctccggctc tcccctggca tatcgtgtgt
     1201 gccccctgag cagttgaata acaatgtcat ttagcccctc tctcagaatt ccaaatatat
     1261 atggaacctc ttagcacctc tctttgttgc tcccaagctg gtctttctca tgggtgcctc
     1321 ccttttcatc tgtttcccca aagcttgctg cttcctggag ctgaagagat ctgtgacatt
     1381 catgcatgca ttcctttctt tgccctcaac acctctcctc cctatgtaac agtggagtgt
     1441 caataaaatc ccggtgaatg agtca
//
