LOCUS       NM_053578                835 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus ATPase H+ transporting V0 subunit e1 (Atp6v0e1),
            mRNA.
ACCESSION   NM_053578
VERSION     NM_053578.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Chang,S.H., Jung,I.S., Han,G.Y., Kim,N.H., Kim,H.J. and Kim,C.W.
  TITLE     Proteomic profiling of brain cortex tissues in a Tau transgenic
            mouse model of Alzheimer's disease
  JOURNAL   Biochem Biophys Res Commun 430 (2), 670-675 (2013)
   PUBMED   23211594
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Blake-Palmer,K.G., Su,Y., Smith,A.N. and Karet,F.E.
  TITLE     Molecular cloning and characterization of a novel form of the human
            vacuolar H+-ATPase e-subunit: an essential proton pump component
  JOURNAL   Gene 393 (1-2), 94-100 (2007)
   PUBMED   17350184
REFERENCE   3  (bases 1 to 835)
  AUTHORS   Tsuchida,H., Yamamoto,N., Kajii,Y., Umino,A., Fukui,K. and
            Nishikawa,T.
  TITLE     Cloning of a D-serine-regulated transcript dsr-1 from the rat
            cerebral cortex
  JOURNAL   Biochem Biophys Res Commun 280 (4), 1189-1196 (2001)
   PUBMED   11162653
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AB037248.1.
            
            On Jul 27, 2004 this sequence version replaced NM_053578.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB037248.1, FQ226841.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-835               AB037248.1         1-835
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..835
                     /gene="Atp6v0e1"
                     /gene_synonym="Atp6k; Atp6v0e; dsr-1; Dsr-1A"
                     /note="ATPase H+ transporting V0 subunit e1"
                     /db_xref="GeneID:94170"
                     /db_xref="RGD:621393"
     exon            1..204
                     /gene="Atp6v0e1"
                     /gene_synonym="Atp6k; Atp6v0e; dsr-1; Dsr-1A"
                     /inference="alignment:Splign:2.1.0"
     CDS             101..346
                     /gene="Atp6v0e1"
                     /gene_synonym="Atp6k; Atp6v0e; dsr-1; Dsr-1A"
                     /EC_number="7.1.2.2"
                     /note="V-ATPase subunit e 1; V-ATPase M9.2 subunit;
                     vacuolar proton pump subunit e 1; D-serine-regulated
                     transcript 1 protein; V-ATPase 9.2 kDa membrane accessory
                     protein; ATPase, H+ transporting, V0 subunit E; ATPase, H+
                     transporting, lysosomal 9kDa, V0 subunit e1; ATPase, H+
                     transporting, lysosomal V0 subunit E1; vacuolar
                     proton-ATPase subunit M9.2; ATPase, H+ transporting,
                     lysosomal, V0 subunit e1"
                     /codon_start=1
                     /product="V-type proton ATPase subunit e 1"
                     /protein_id="NP_446030.3"
                     /db_xref="GeneID:94170"
                     /db_xref="RGD:621393"
                     /translation="MAYHGLTVPLIVMSVFWGFVGLLVPWFIPKGPNRGVIITMLVTC
                     SVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYHWP"
     exon            205..252
                     /gene="Atp6v0e1"
                     /gene_synonym="Atp6k; Atp6v0e; dsr-1; Dsr-1A"
                     /inference="alignment:Splign:2.1.0"
     exon            253..380
                     /gene="Atp6v0e1"
                     /gene_synonym="Atp6k; Atp6v0e; dsr-1; Dsr-1A"
                     /inference="alignment:Splign:2.1.0"
     exon            381..835
                     /gene="Atp6v0e1"
                     /gene_synonym="Atp6k; Atp6v0e; dsr-1; Dsr-1A"
                     /inference="alignment:Splign:2.1.0"
     regulatory      809..814
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Atp6v0e1"
                     /gene_synonym="Atp6k; Atp6v0e; dsr-1; Dsr-1A"
                     /experiment="experimental evidence, no additional details
                     recorded"
ORIGIN      
        1 ggggtggggc tttcgcgcgc cggtcacgtg agcctctgtt gacacttccg ggtgggacga
       61 gagtgaggcg gtggactggt tcggctccgg ggtcgcaggc atggcatacc acggcctcac
      121 tgtgcctttg atcgtgatga gcgtgttctg gggcttcgtg ggcctcctcg tgccctggtt
      181 tatccccaag ggtcctaacc ggggagttat catcaccatg ttggtgacct gttccgtttg
      241 ctgctatctc ttttggctga ttgcgattct ggcgcagctc aatcctctgt ttggaccaca
      301 gttgaaaaat gaaaccatct ggtatctgaa gtatcactgg ccttgaggat gaaggcatgc
      361 tgcacagtgc aggcactgag gtcacagcta gaagccttct agatacagaa tcacctgcac
      421 accgacctcc ttcctcgaca gcctacttcg gccattacct gccttacact tgaaggcctt
      481 cctctgcata cagtattttt tctccttcac cttttttaca ctttgaatta tgtgcctgca
      541 tagctgactt tgagatgtgt ctctgcactc gactgagaga aaaggtgctg ttctgggaaa
      601 tctgttactc ttgtcttgaa gcctgccact ttgaatatgg ctcttgcctg ctcacaacat
      661 gagagtcagc gatgtgttta agaattgctg caagacaaat gagactcagt gggacagtca
      721 ggagtgcctg ctcgagagaa gctctacccc agcagatgta caccaaactc tattttcagg
      781 atgaatttct tacttctaca tcttttggaa taaattattt ttcttctttc tatgg
//
