LOCUS       NM_001402160             617 bp    mRNA    linear   ROD 26-NOV-2024
DEFINITION  Rattus norvegicus ATP synthase membrane subunit j (Atp5mj), mRNA;
            nuclear gene for mitochondrial product.
ACCESSION   NM_001402160 XR_355163
VERSION     NM_001402160.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Meyer,B., Wittig,I., Trifilieff,E., Karas,M. and Schagger,H.
  TITLE     Identification of two proteins associated with mammalian ATP
            synthase
  JOURNAL   Mol Cell Proteomics 6 (10), 1690-1699 (2007)
   PUBMED   17575325
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Mar 8, 2022 this sequence version replaced XR_355163.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ224630.1, FM076126.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840110 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-81                JAXUCZ010000006.1  136845560-136845640 c
            82-205              JAXUCZ010000006.1  136842167-136842290 c
            206-229             JAXUCZ010000006.1  136841239-136841262 c
            230-617             JAXUCZ010000006.1  136839890-136840277 c
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q32"
     gene            1..617
                     /gene="Atp5mj"
                     /gene_synonym="Atp5mpl; MLQ"
                     /note="ATP synthase membrane subunit j"
                     /db_xref="GeneID:100912557"
                     /db_xref="RGD:6486223"
     exon            1..81
                     /gene="Atp5mj"
                     /gene_synonym="Atp5mpl; MLQ"
                     /inference="alignment:Splign:2.1.0"
     CDS             82..264
                     /gene="Atp5mj"
                     /gene_synonym="Atp5mpl; MLQ"
                     /note="6.8 kDa mitochondrial proteolipid; 6.8 kDa
                     mitochondrial proteolipid protein; aTP synthase subunit
                     ATP5MJ, mitochondrial; 6.8 kDa mitochondrial
                     proteolipid-like; ATP synthase membrane subunit 6.8PL"
                     /codon_start=1
                     /product="ATP synthase subunit ATP5MPL, mitochondrial"
                     /protein_id="NP_001389089.1"
                     /db_xref="GeneID:100912557"
                     /db_xref="RGD:6486223"
                     /translation="MLQSFIKKVWVPMKPYYTQVYQEIWVGVGLMSLIVYKIRSADKR
                     SKALKGCSPAHAHGHH"
     exon            82..205
                     /gene="Atp5mj"
                     /gene_synonym="Atp5mpl; MLQ"
                     /inference="alignment:Splign:2.1.0"
     exon            206..229
                     /gene="Atp5mj"
                     /gene_synonym="Atp5mpl; MLQ"
                     /inference="alignment:Splign:2.1.0"
     exon            230..617
                     /gene="Atp5mj"
                     /gene_synonym="Atp5mpl; MLQ"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcaggctccg cgcggcgcct gcgtgctctg tgacctttcc cattctgtcg cggaatctag
       61 tgtggccttg atcccgctga gatgcttcaa agctttatta agaaggtctg ggtccccatg
      121 aaaccctact atacccaggt ttaccaggaa atttgggtag gagtggggtt gatgtccctc
      181 atcgtttata aaatcaggag tgctgataaa agaagtaaag ctctgaaagg ctgcagtcct
      241 gcgcatgccc atggccatca ctaactgctc ccccagtcca ctcaggatga atacgtcagc
      301 tgaacttaag caagctgtgt agatgggaac atggaacatc actgtacagt tacctaagta
      361 ccgtttacaa tgtggcatta ataaatgtgt ctgagaagca ccactccctg tgaataccac
      421 tgtctgctcc cctgaataaa tccttggtaa agcggccggc tccatcagaa cctctgagac
      481 gacttcctta gggatcctga ggaccaagaa gcagtgtttg ctgccctaag attggacatc
      541 aggatctagt gttaactttg atattattaa ctaataatat tcaataatta tttgccaaat
      601 ggttttgctt ctgccta
//
