LOCUS       NM_212516               1597 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus ATP synthase membrane subunit G (Atp5mg), mRNA;
            nuclear gene for mitochondrial product.
ACCESSION   NM_212516 XM_217128
VERSION     NM_212516.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Armand-Ugon,M., Ansoleaga,B., Berjaoui,S. and Ferrer,I.
  TITLE     Reduced Mitochondrial Activity is Early and Steady in the
            Entorhinal Cortex but it is Mainly Unmodified in the Frontal Cortex
            in Alzheimer's Disease
  JOURNAL   Curr Alzheimer Res 14 (12), 1327-1334 (2017)
   PUBMED   28474567
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Meyer,B., Wittig,I., Trifilieff,E., Karas,M. and Schagger,H.
  TITLE     Identification of two proteins associated with mammalian ATP
            synthase
  JOURNAL   Mol Cell Proteomics 6 (10), 1690-1699 (2007)
   PUBMED   17575325
REFERENCE   3  (bases 1 to 1597)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   4  (bases 1 to 1597)
  AUTHORS   Da Cruz,S., Xenarios,I., Langridge,J., Vilbois,F., Parone,P.A. and
            Martinou,J.C.
  TITLE     Proteomic analysis of the mouse liver mitochondrial inner membrane
  JOURNAL   J Biol Chem 278 (42), 41566-41571 (2003)
   PUBMED   12865426
REFERENCE   5  (bases 1 to 1597)
  AUTHORS   Aggeler,R., Coons,J., Taylor,S.W., Ghosh,S.S., Garcia,J.J.,
            Capaldi,R.A. and Marusich,M.F.
  TITLE     A functionally active human F1F0 ATPase can be purified by
            immunocapture from heart tissue and fibroblast cell lines. Subunit
            structure and activity studies
  JOURNAL   J Biol Chem 277 (37), 33906-33912 (2002)
   PUBMED   12110673
REFERENCE   6  (bases 1 to 1597)
  AUTHORS   Ko,Y.H., Hullihen,J., Hong,S. and Pedersen,P.L.
  TITLE     Mitochondrial F(0)F(1) ATP synthase. Subunit regions on the F1
            motor shielded by F(0), Functional significance, and evidence for
            an involvement of the unique F(0) subunit F(6)
  JOURNAL   J Biol Chem 275 (42), 32931-32939 (2000)
   PUBMED   10887193
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Mar 18, 2021 this sequence version replaced NM_212516.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360190.1535213.1,
                                           SRR23984936.344735.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760434, SAMN12840107
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-127               JAXUCZ010000008.1  54130281-54130407   c
            128-288             JAXUCZ010000008.1  54125027-54125187   c
            289-1597            JAXUCZ010000008.1  54122457-54123765   c
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..1597
                     /gene="Atp5mg"
                     /gene_synonym="Atp5l"
                     /note="ATP synthase membrane subunit G"
                     /db_xref="GeneID:300677"
                     /db_xref="RGD:1303259"
     exon            1..127
                     /gene="Atp5mg"
                     /gene_synonym="Atp5l"
                     /inference="alignment:Splign:2.1.0"
     CDS             76..387
                     /gene="Atp5mg"
                     /gene_synonym="Atp5l"
                     /EC_number="3.6.1.14"
                     /note="ATP synthase, H+ transporting, mitochondrial F0
                     complex, subunit G; ATPase subunit g; ATP synthase, H+
                     transporting, mitochondrial Fo complex, subunit G"
                     /codon_start=1
                     /product="ATP synthase subunit g, mitochondrial"
                     /protein_id="NP_997681.2"
                     /db_xref="GeneID:300677"
                     /db_xref="RGD:1303259"
                     /translation="MAKFIRNLADKAPSMVAAAVTYSKPRLATFWHYARVELVPPTLG
                     EIPTAIQSMKSIIHSAQTGNFKHLTVKEAVLNGLVATEVWMWFYIGEIIGKRGIVGYD
                     V"
     exon            128..288
                     /gene="Atp5mg"
                     /gene_synonym="Atp5l"
                     /inference="alignment:Splign:2.1.0"
     exon            289..1597
                     /gene="Atp5mg"
                     /gene_synonym="Atp5l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggggtccttc cgcgggtcct tacgggggtg acattcagcc gctggttcgg ggagacgaac
       61 cttccacctt agaccatggc caagttcatc cgtaacctcg cggacaaggc accgtcgatg
      121 gtggcggctg ccgtgactta ctcgaagcct cgattggcca cattttggca ctatgctagg
      181 gttgagctgg ttcccccaac ccttggtgaa atccctacag ctattcagag catgaaaagt
      241 ataattcaca gtgcccaaac tggtaacttc aaacacctca cagttaagga agctgtgctg
      301 aatggtttgg tggccactga ggtgtggatg tggttttata tcggagagat cataggcaaa
      361 cgtggcattg ttggctatga tgtttgaaga ccaatcttta acttctgatt tgagttctta
      421 tcttggacca tgtgtaatga gactgctatc tgaataaaat gctagctgtg cagtggcagt
      481 gtttcctctg tcaagtactg cacagtgaca gtatttcctg atagtaagtt agtcgtcttt
      541 ggctttgtta cactgataca ggtttaagtg tatgtttgtt taacctgcaa ttaggaaaaa
      601 cttgtgaata tacatggtac atggacgtat gatggttaaa attttaattt aaaatttaat
      661 ggttgggttg gggatttagc tcagtggtag agcgcttgcc taggaagtgc aaggccctgg
      721 gttcggtccc cagctccgaa aaaaagaacc aaaaaaaaaa aaaaaaatta atggtggtgg
      781 tggtgcacac caggaagtag aggctggtga tctcggagtt cgaggccagc ctagtcaaca
      841 gagcaagttc aggacagcca gagctacaca gagaaacttt tgtctctccc acctaccaaa
      901 aaaaaaatct gtaatcctag tagttgggag gctcacttca gatttaaagc taacttgcat
      961 ggactacaca gtttcaggcc agtaatagtt aaacaatgaa gctcttatct ctaaagagaa
     1021 agaggctgaa actttaaaca ggtgtagtgc atatgcccaa caacagaaaa gactgatgta
     1081 agatcacttg agtcaaggag ctcaagacca acctgaatgt ataatgggac tttgtctcac
     1141 aaggaaatat gggggaggga caggagtgta aggccagctt gggctatatg aggcattgtc
     1201 tcataaacaa tattcttaaa aatgttgatg taggcctcag attgaatatt tgcatcaaga
     1261 atgaagaggg tagtatgctt agctatacga ttataacgtc tttgacagta gggcacggta
     1321 aaagacccat gtaactggac agtctgtgac aggaacctct catcctagtg ttcatgaagg
     1381 tctctgaatt caacaccatt ctggtctgca tattcagttc cagtacagcc aggactatat
     1441 agacagatcc tgtctttctt caaagaatag tctaactggg atatattatt aatctggttt
     1501 tgtagttttg caagatccag tagataacat ttccagtggt gacatccaag gctctaagta
     1561 gtgtattatg ggctgaaata aacagtgatt agtatca
//
