LOCUS       XM_006257599            7328 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ATPase phospholipid transporting 11C
            (Atp11c), transcript variant X1, mRNA.
ACCESSION   XM_006257599
VERSION     XM_006257599.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006257599.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006257599.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7328
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7328
                     /gene="Atp11c"
                     /note="ATPase phospholipid transporting 11C; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 18 ESTs, 10 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     18 samples with support for all annotated introns"
                     /db_xref="GeneID:317599"
                     /db_xref="RGD:1564481"
     CDS             1452..4844
                     /gene="Atp11c"
                     /codon_start=1
                     /product="phospholipid-transporting ATPase IG isoform X1"
                     /protein_id="XP_006257661.1"
                     /db_xref="GeneID:317599"
                     /db_xref="RGD:1564481"
                     /translation="MASSFSNTSECAGEEKRVGTRTVFVGNHPISGTEAYIAQRFCDN
                     RIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVTVDTPTSPVTSGLPLFFVITV
                     TAIKQGYEDWLRHRADNEVNKSTVYIIENAKRVRKESEKIKVGDVVEVQADETFPCDL
                     ILLSSCTTDGTCYVTTASLDGESNCKTHYAVRDTIELCTAESIDNLRAAIECEQPQPD
                     LYKFVGRISIYSNSIEAVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQ
                     GKSQKRSAVEKSINAFLIVYLFILLTKAAVCTTLKYVWQSTPYNDEPWYNQKTQKERE
                     TFKVLKMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKDFFDEEINEGALV
                     NTSDLNEELGQVDYVFTDKTGTLTENSMEFIECCIDGHKYKGTTQEVDGLSQIDGPLA
                     YFDKADKNREELFLRALCLCHTVEIKTNDAVDGPIEGAQFTYISSSPDEIALVKGAQK
                     FGFTFLGNWNGHIRVENQRKEIEEYELLHTLNFDSVRRRMSVIVRTQGGDILLFCKGA
                     DSSIFPRVHSHEIDLTKVHVERNAMDGYRTLCVAFKEIPPDDFERINVQLIEAKMALQ
                     DREEKLEKIFDVIETNMNLIGATAVEDKLQDQAAETIEALHAAGLKVWVLTGDKMETA
                     KSTCYACRLFQTNTELLELTTKTIEESERKEDRLHELLIEYRKKLLHEFPKSTRSLKK
                     AWTEHQEYGLIIDGSTLSLILNSSQDCSSNNYKSIFLQICMKCTAVLCCRMAPLQKAQ
                     IVRMVKNLKGSPITLSIGDGANDVSMILESHVGIGIKGKEGRQAARNSDYSVPKFKHL
                     KKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNI
                     CFTSLPILAYSLLEQHINIDALTADPRLYMKITGNAMLQLGPFLYWTFLAAFEGTVFF
                     FGTYFLFQTTSLEDNGKIYGNWTFGTIVFTVLVFTVTLKLALDTRFWTWINHFVIWGS
                     LAFYVFFSFFWGGIIWPFLKQQRMYFVFAQMLSSVSTWLAIILLIFISLFPEILLIVV
                     KNVRRRSARRNLSCRRASDSLSARPSVRPLLLRTFSDESNIL"
ORIGIN      
        1 tatttattta atgttttttc tatatctcag gatactctta agagttgtct cttttacttc
       61 aaaacattta ctgattttgg caaaatcttc taagcatctt ttaaggataa tttagttttg
      121 gagctagaga gatagctctg tagttagaac acaggctgct tggcccaggg agtggcacta
      181 ttataggatg tggccctgtt ggagtaggtg tgtcagtggg tatgggattt aaggcccaca
      241 ccctagctgc ctggaagcca gtcttcttcc agcagccttc agaggaagat agcgaacttt
      301 cagctcctcc tgcaccatgc ctgcctggat gctgccatgc ttcccgccat gatgataatg
      361 gactgaacct ctcaacctgt aagccagcct caattaaacg ttgtcctttg tgagagttgc
      421 cttggtcgtg gtatctgttc acagcaatgg aaactgagta attaagacag aagtgaaata
      481 aaaccctgtt cataccatca tatacttctt cctttttgtc tcttatactt tagccagaac
      541 ttttccttat actgtaatat ttttttcttt tctgatatag aaagtagttc ttgaataaga
      601 atttatctct tctgggtaat aatattgatt ttaggtactt cctctatttg gtggttcttt
      661 ttgctggata ttgctgtttg caacaaaact ctcataccta tgaaatctct aaataataaa
      721 gagaattttc tattcctaaa taaactttcc acagaaacca ttttcttctc tttcatatgt
      781 tacttcaaaa tttaagattg tcatagtttc ttaaggaaaa tcacagtgat tcatagcaaa
      841 cacctagaat atttctctta aactattcaa agatctaaga ttaacgtttc aattaaattg
      901 ggcaagaggc tgaatcaggt gtgagtttta ggccaccctg tttctaggtc agccagtgct
      961 gcatagtgag acccagtttg acaaaatcaa atatatataa ttaacactta tgaattgtcc
     1021 taagaaatgt aattgtcatc attgtttgtt tattgtggat agggattaag gcaaggaaca
     1081 gagaaatttt ctaagatgaa gaaagaatac aatactgtgc caagatacta atatttgaaa
     1141 aatatgctca aattgacatt accaagacag attaggattt ttagagaaaa gtagtagaca
     1201 gacatgaagt gccacagtat cagacgccaa tccactagag tgctgtttct aaactaactc
     1261 tttaaggtcc tctaatactt cttgccacct cccacagaag tacataaact cctcaaccaa
     1321 agttggcttt catcctaaat tccaggaaac tttgcaagga ttacagggat cggtacaact
     1381 tcttaatgct ctgcagtctt ctctctgcaa tttagctgct ttctgttaga aaatttcaag
     1441 tcagtctgca gatggcctca tctttttcta acacctctga gtgtgctgga gaagagaaac
     1501 gagttggtac acgcacagta tttgttggca atcatcccat ttcaggaaca gaagcttaca
     1561 ttgcacagag attttgtgat aatagaatag tctcatctaa gtatacactt tggaatttcc
     1621 taccaaagaa tttgtttgaa cagtttagaa gaattgcgaa tttttatttt ctcatcattt
     1681 tccttgtaca ggtcacagta gacacaccaa ccagcccagt taccagtgga cttccacttt
     1741 tcttcgttat aactgttaca gcaatcaagc agggatatga agattggctt agacacagag
     1801 ctgataatga agttaacaaa agtactgttt atattattga aaatgcaaaa cgagtaagaa
     1861 aagaaagcga aaaaatcaag gttggtgatg tagtagaagt acaggcagat gaaacctttc
     1921 cctgtgatct tattcttctg tcatcctgca caactgatgg aacctgttat gtcactacag
     1981 ccagtcttga tggcgaatcc aattgcaaga cacattatgc agtgcgagat accattgaat
     2041 tgtgtacagc cgaatccatt gataatctcc gagcagccat tgaatgtgag cagccgcaac
     2101 ctgacctcta caagtttgtt gggcgaatca gtatctatag taatagtatt gaggctgttg
     2161 ccaggtcttt gggacctgaa aatcttttgc tgaaaggagc cacacttaaa aataccaaga
     2221 agatatatgg agttgctgtt tacactggga tggaaaccaa aatggctttg aattaccaag
     2281 ggaaatctca gaaacgttct gctgttgaaa aatctattaa tgccttcttg attgtttatt
     2341 tatttatctt actgaccaaa gctgcagtat gcacaactct aaagtatgtt tggcaaagta
     2401 ccccctacaa tgatgagcct tggtataacc aaaagactca gaaggaacgg gaaactttta
     2461 aggttttgaa aatgttcact gactttttat cattcatggt tctcttcaac ttcattatac
     2521 ctgtctccat gtatgtcaca gtagaaatgc agaaattttt agggtcattc tttatttcat
     2581 gggacaaaga cttttttgat gaagaaatta atgaaggagc cttggttaac acatcagacc
     2641 ttaatgaaga acttggtcag gtggactatg tatttacaga taagactgga acactcactg
     2701 aaaatagcat ggaattcatt gaatgctgca tagatgggca caagtataaa ggcacaactc
     2761 aggaagttga tggattatct cagattgatg ggcccttagc ctattttgat aaagcagata
     2821 agaaccggga ggagctcttt ctccgtgccc tgtgcttatg tcacactgta gaaattaaaa
     2881 caaatgatgc agtggatgga cctatagaag gagcacagtt cacgtatatc tcttcctcac
     2941 cagatgaaat agctttggtg aaaggagctc aaaagtttgg gttcacattt ttgggaaatt
     3001 ggaatggaca tatcagagta gagaaccaaa gaaaagaaat agaagagtat gaacttctcc
     3061 acaccttaaa ttttgattct gtccgccgac gtatgagtgt aattgtaagg acccaaggag
     3121 gagatatact acttttctgt aaaggagcag attcatccat ttttcccagg gtgcatagcc
     3181 atgaaattga tttaaccaag gtccatgtgg agcgtaatgc aatggatggg tatcggactc
     3241 tttgtgtagc cttcaaagaa attcccccag atgattttga aagaatcaat gtacaactga
     3301 tagaggctaa aatggcccta caagatagag aagaaaaact ggagaagatt tttgatgtga
     3361 ttgagactaa catgaattta attggagcca ccgctgtgga agacaagcta caagatcagg
     3421 ctgcagagac cattgaagct ctccatgcag ctggcttaaa agtctgggtg cttactgggg
     3481 acaagatgga aactgccaag tctacttgtt atgcctgccg ccttttccaa accaatactg
     3541 agctcttgga actgactaca aaaaccattg aagaaagcga aaggaaggaa gatcgattgc
     3601 atgaactgtt aatagaatat cgtaagaaat tgctacatga gtttcctaaa agcactagaa
     3661 gccttaaaaa agcatggaca gaacatcagg aatatggatt aatcattgat ggctccacat
     3721 tgtcacttat actaaattct agtcaagatt gtagttcaaa caactataaa agcatttttc
     3781 tacaaatctg tatgaaatgc actgcagtgc tctgctgccg gatggcacca ttacaaaaag
     3841 cccagattgt gagaatggtg aagaacttga aaggcagccc cataacactg tcaataggtg
     3901 atggtgccaa tgatgtcagt atgattttgg aatcccatgt gggaataggt attaaaggaa
     3961 aagaaggtcg tcaagcagcc aggaatagtg attattctgt tccaaagttt aaacatttaa
     4021 agaaactgct attggctcat ggacatctat actatgtgag aatagcacat cttgtacaat
     4081 atttcttcta caagaacctt tgtttcattt tgccacagtt tttgtaccaa ttcttctgtg
     4141 gattctcaca acagccactc tatgatgctg cttatcttac aatgtataat atctgtttca
     4201 catccctgcc catcctggct tacagtctac tggaacagca catcaacatt gatgctctga
     4261 ctgcagaccc tcgattgtat atgaaaatta ctggcaatgc tatgttacag ttggggccct
     4321 tcttatattg gacatttctg gctgcatttg aagggacagt gttcttcttt gggacttatt
     4381 tcctttttca gactacatcc ttagaagaca atggaaagat ttatggaaat tggacatttg
     4441 gaaccattgt ttttacagtc ttagtattca ctgtaactct gaagctcgcc ttggataccc
     4501 gattctggac atggataaat cattttgtga tttggggttc tctggccttt tatgtttttt
     4561 tctcattctt ctggggagga attatttggc cttttctgaa acaacagaga atgtattttg
     4621 tgtttgctca aatgctctct tctgtatcta catggttggc tataattctt ttaatattta
     4681 tcagcctttt ccccgagatt ctcctaatag tagtaaagaa tgtgcgaaga aggagtgcca
     4741 ggagaaatct gagctgtaga agggcatctg actcattatc cgccagacct tcagtcagac
     4801 ctcttctttt acgaacattc tcagacgaat ctaatatatt gtaacagaat ccgaatcttg
     4861 aactgcctat gttattgtcc tacaagcata ttgaccgtgg ttgcagctaa agaaagaaag
     4921 catgaaggaa gagctacaga agatattaac tcaggatact caatgtgaaa cagaaaccac
     4981 tctcatgtgt aggcttcaga ataaatggtc attaaagtac caaataacta tcttaaccat
     5041 ttacagttat tgtaagtggc catcatggcc aaagttagag aattatatga aagtttaaag
     5101 taagcatact tagaattctg gatttacata gaataccgta actacgaagt gggtgctctt
     5161 ttaacccgtc aactttggat ggatttaaat agtagtataa agtagaagcc atgcaatggg
     5221 aatgagcaga ttttgctata acagtgttac tttttcctgg cagaagacat agactgtttg
     5281 taccacattt ctcattcctg ctgaatgatt atctttttcc ccccacacac aaaaggaata
     5341 cttgaaaata caggactcca attatattac tgcatcagat aaaatagatc atcttctttt
     5401 caatcatagg ctaattgtct tgttctaaga tcctttccca aaagtacctt gcatatttgt
     5461 atgatactgt taatctgggt attattgtag aaacaggggt ggaaaggtta tttggtgtgt
     5521 tttcttctga attacacacc acttacatat ttaagactac taaacttgaa aataaaatat
     5581 ttcagtctct tggtgacagc ccctcaaaac agttaagtag tagaacgatt tctaaggtca
     5641 gttttgctgg gtaatgcaat aaggtatgtt aaatatttat ataaaaatta atgccattct
     5701 taacatcacc attttataat tttatgtggc aaagatgaga agaatagctc attttcaact
     5761 actaacggtt tttatttgaa agagattgtt tttgtgcata tttatagcac tttttttgaa
     5821 gttaccaatt tggaaagagg agatctcttc caaagccctg tagagccaca actctttgga
     5881 aatgaatgtt gtttcctatt gctaaggggg tcggggaaat ggtctaatct taaactgtgt
     5941 ggttaacctt ggtaagaaat aggttttagc ccctcataag ttattgtaaa acatgaaaga
     6001 agtgtgaaat gcctttactt gatagaagga ccacatttgt cagttaggct aaaatggtat
     6061 ctagaaaata tttttctatc agttcccttt tttgtctttc tgatatgcct gtactattta
     6121 atgtttatat tgtatcttta tttagaaata tattagaatc attgtcttcc agtgtattta
     6181 tagagtccat gtggcacatt tgattcttcc ataaatttgt gtggatgtta aggtgtaatt
     6241 tttcttaaat tctaaaaagg ccataatttc agttatcaaa aaccattcca taattactta
     6301 atttaacttg ttctcatcta tcagtattac ttttgtttat tttgttaggt gtaaatcaca
     6361 gcttaatgtg ctgtgtgcgc tcctgtagcc tatatggagg taatccgctg aaagcaaagg
     6421 ctttctgttc ttggcctatc caaagagctc aaacatctaa cctaggaaag ctttgctctt
     6481 ttcttattgt tgtcattgtt gatgctgctg tattacttta catcagaact ataaggactg
     6541 tgaataaata gaagagccaa atagagaggc tcagttaatg cagaatgatt gaggagttga
     6601 taaaatcagg atatttaggg cagtagaact aagactggat ctgtgtgact tgttgcagca
     6661 gaaagcaatc tagatgagca agtgagggca tttagagtca tgcctcagtt aatcattgca
     6721 ttgcacactg cacttcagat cggaggaacc tggctttgct ttttaaagat tctgattagt
     6781 gatctaaaac atgcctagca tagggttagc agatgaagta attggaaatg agccatccag
     6841 cattcctagc actatatttt aactactctt atgtcagaag atggcaagaa atctaacagt
     6901 aggaccgtat tgctatgatt tgaataataa tttttgagct gtcaaaatgt ctgtaatttt
     6961 ccaaattgtt gtctattgtt taaggatgtt gcctattaaa caaaaaaata tccattccat
     7021 atctactaca tatacaccag caacagtata aatgtaagcc taaatttgca aaagtcataa
     7081 tttagtggtg gaatttttta ataacatgca gtatataaag tgcagatttt atgcaaatgt
     7141 tgataaaatc atttttcagc ttataaaatg gaactgcgat attacatttt tcacttaagc
     7201 agttttttac atctactttg ttgctttcta aaatgaacat gaatgccatc ttttatgaat
     7261 gcaacttgcc tttttcatta cagaaatttt tctttgatgt aatcaataaa ctttggtatg
     7321 atacaata
//
