LOCUS       XM_039092718            5919 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ATPase phospholipid transporting 10D
            (putative) (Atp10d), transcript variant X1, mRNA.
ACCESSION   XM_039092718
VERSION     XM_039092718.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 3, 2024 this sequence was replaced by
            NM_001427806.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5919
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5919
                     /gene="Atp10d"
                     /note="ATPase phospholipid transporting 10D (putative);
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 ESTs, 6 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 92 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:360932"
                     /db_xref="RGD:1588541"
     CDS             292..4545
                     /gene="Atp10d"
                     /codon_start=1
                     /product="phospholipid-transporting ATPase VD isoform X1"
                     /protein_id="XP_038948646.1"
                     /db_xref="GeneID:360932"
                     /db_xref="RGD:1588541"
                     /translation="MTELLRWARHHWHRLMNGRTQGDDERSYNYSSLLACGGKSPQTP
                     RPAGKHRVVIPHLQGFKDEYERFSGTYVNNRIRTTKYTLLNFVPRNLFEQFHRAANLY
                     FLFLVVLNWVPLVEAFQKEITMLPLVVVLTIIAIKDGLEDYRKYKIDKQINNLITKVY
                     SRKEKKYIDCCWKNVTVGDFIRLSCNEIIPADMVLLFSTDPDGICHIETSGLDGESNL
                     KQRQVVRGYAEQDSEVDPEKFSSRIECESPNNDLSRFRGFLEHSNKERVGLSKENLLL
                     RGCTIRNTEAVVGIVVYAGHETKAMLNNSGPRYKRSKLERRANTDVLWCVLLLIVMCL
                     TGALGHGIWLSRYENMLFFNIPEPDGRVLSPVLTGFYVFWTMIILLQVLIPISLYVSI
                     EIVKLGQIYFIQSDVEFYNEKMDSTIQCRALNITEDLGQIQYLFSDKTGTLTENKMVF
                     RRCSVAGFDYCHEENAKRLESYQEAVSEEEECTDTLSGSLSLGSVARPRAQSCRTAHS
                     RLPGKPLAQLSGSTSAVGNGEGSGEVLHSRQAAFSSPIETDVVPDTRLLDKFSQITPQ
                     LFTRLDGAAQSAPLETLYIMDFFIALAICNTVVVSAPNQPRQKIGLSSLGGMPIKSLE
                     EIKNIFQKLSVRRSSSPSLASGKDSTSGTPCAFVSRISFFSRTKLSPPVEDESSQMDE
                     IPQASNSACCTESEAENSDVGLPIDSAEALDGPPPLASNLCYEAESPDEAALVYAARA
                     YHCTLRSRTPEQVVVDFAALGPLTFQLLHILPFDSVRKRMSVVVRHPLSKQVVVYTKG
                     ADSVIMELLSVASSDGTNLEDQQMVIRERTQRHLDEYAKRGLRTLCVAKKVMSDTEYA
                     EWLRNHFLAETSIDNREELLVESAMRLENKLTLLGATGIEDRLQEGVPESIEALHKAG
                     IKIWMLTGDKQETAVNIAYACKLLEPDDKLFILNTQSEDACGMLMSAILEELQKRTQV
                     SPELASPRKNFPQPPDPQVPGRAGLVITGKTLEFALQESLQKQFLELTAWCQAVICCR
                     ATPLQKSEVVKLVRNHLHVMTLAIGDGANDVSMIQVADIGIGVSGQEGMQAVMASDFA
                     ISQFRHLSKLLLVHGHWCYTRLSNMILYFFYKNVAYVNLLFWYQFFCGFSGTSMTDYW
                     VLIFFNLLFTSVPPIIYGVLEKDVSAETLLQLPELYQSGQRSEEYLPLTFWITLLDAF
                     YQSLVCFFVPYFTYQGSDIDIFTFGNPLNTAALLIILLHLVIESKSLTWIHMLVIVGS
                     ILSYFFFALAFGALCVTCNPPSNPYGIMQKHMLDPVFYLVCVLTTCVALLPRFVYRVL
                     QGSVFPSPILRAKYFDRLSPEERAEALKRWRGTAKVNHVASKYASQSAAKSGRPRPGP
                     SVAMKSATVCTIEQSTRETVLDLGYSKPGASTMTEPLAS"
ORIGIN      
        1 caccggcgct gtgtcggcgt ggagcccccg aggtctacag gagggcgggg agtcgcctgc
       61 tccgcccggt tcaggcgccc gcgctccgca cgcggagctg gggagctggg aagtaggtat
      121 tgttctgctt ctccaagaca aatggctggc ttggaagtgt aactctccct gctctgtgga
      181 tccctgcccg gttctctttt ggcactttgg gatccgaggt aaccatgctg tgatgagcgc
      241 ctcgggaggg acaggtcacc tataccagcc aggtctccct gcgtcttgga catgactgag
      301 cttctccggt gggccagaca tcactggcat cggctgatga atgggaggac ccagggtgac
      361 gatgagaggt catacaacta ctcctcactg ctcgcctgcg ggggcaagtc cccccagacc
      421 cccagacccg cggggaagca ccgtgtcgtc attcctcacc ttcagggctt caaagatgag
      481 tatgaaaggt tttctggaac ctacgtgaat aaccggatac ggacgaccaa gtacacactt
      541 ctgaactttg tgccaagaaa cttatttgaa cagtttcaca gggccgccaa tctatatttc
      601 ctgttcctcg tggtcctgaa ctgggtgcct ttggtagaag ccttccaaaa ggaaatcacc
      661 atgctgcctc tggtagtggt tctcacaatc attgcaatta aagatggctt ggaagactac
      721 cggaaataca aaatcgacaa gcagatcaac aacttaataa ccaaagttta cagtaggaaa
      781 gaaaaaaagt acattgactg ttgctggaaa aacgtcaccg tcggggactt catccgcctg
      841 tcctgcaacg agatcattcc tgcagacatg gtcttactct tttccacaga ccctgatgga
      901 atctgccaca tcgagacttc cggccttgat ggagagagca atttaaagca gaggcaagtg
      961 gtacgcggct atgcagagca ggactctgaa gttgatcctg agaagttttc cagtaggata
     1021 gaatgtgaaa gtccaaataa tgacctcagc agattccgag gcttcctgga acactccaac
     1081 aaagaacgtg tgggcctcag caaagagaac ttattgctcc gagggtgcac gatcagaaac
     1141 acagaggctg ttgtgggcat tgtggtctat gcaggtcatg agaccaaagc gatgctgaac
     1201 aacagtgggc cgcggtataa gcgcagtaag ttagagagga gagcaaacac ggacgtcctc
     1261 tggtgtgtcc tgcttctgat tgtcatgtgc ttaacgggag cactgggtca cggaatatgg
     1321 ctgagcaggt atgaaaacat gctctttttt aacatccctg agccggatgg acgcgtccta
     1381 tccccggtgt tgacaggatt ctatgtgttc tggaccatga tcatcttgtt acaggtcttg
     1441 attcccattt ctctctacgt gtccatcgaa atcgtgaagc tgggacagat ctatttcatc
     1501 cagagtgatg tagagttcta caatgagaag atggactcta ccattcagtg ccgagctctg
     1561 aacatcactg aggaccttgg gcagattcag tacctctttt ccgataagac aggaactctc
     1621 accgagaata agatggtgtt tcggaggtgc agtgtagcag ggtttgacta ctgccatgaa
     1681 gaaaatgcca agaggcttga gtcctatcag gaagctgtct ccgaagagga ggaatgcaca
     1741 gatactctca gcggctccct ctccctcggc agtgtggcga gacccagagc ccagagctgc
     1801 aggacagctc acagtaggct tccgggaaag cccttggctc agctctccgg gagcacctct
     1861 gctgtaggaa atggagaagg atctggagaa gtgcttcatt ccagacaggc tgcattcagt
     1921 agtcccattg aaacagacgt ggtaccagat accagacttt tagataaatt tagccagatt
     1981 acccctcagc tgttcacccg cctggatggt gccgcgcaga gcgcacccct ggagactttg
     2041 tacatcatgg acttctttat tgcactggca atttgcaaca cggtggtggt ttctgctccg
     2101 aaccagcctc gccagaagat tgggctctcc tcactgggtg gaatgcccat caagtccttg
     2161 gaagagatta aaaacatctt ccagaaattg tctgtccgga gatcaagttc accgtccctt
     2221 gcgagcggga aggattcaac ctctgggact ccctgtgcct ttgtgagcag aatctctttc
     2281 tttagtcgaa caaaactgtc gcctcctgtg gaggacgagt cttctcagat ggatgaaatt
     2341 ccccaggcca gtaactcagc ttgctgtaca gaatctgagg cagaaaacag tgacgttgga
     2401 ctccccattg actcagcgga agccctggat ggaccaccgc ccttggcttc caacctgtgt
     2461 tatgaggcgg agagtccaga tgaagcagcc ttggtgtatg ccgccagagc ttaccattgc
     2521 actttacggt ctcggacccc agagcaggtc gtggtggact ttgctgcttt gggtccatta
     2581 acatttcaac tcctacacat cctgcccttt gactcggtaa ggaaaagaat gtcggttgtg
     2641 gtccggcatc ctctttccaa acaagtcgtg gtgtatacaa aaggcgctga ttcggtgatc
     2701 atggagctgc tgtccgtggc ttcctcagat gggacaaatc tagaagatca acagatggta
     2761 ataagggaga gaacgcagag gcacctggac gagtatgcca aacgaggcct gcgcactctg
     2821 tgtgtagcaa agaaggtcat gagtgacacg gaatacgcag agtggttgag gaatcacttt
     2881 ctagcagaaa ccagcatcga caacagggaa gaattgctag ttgaatctgc catgaggcta
     2941 gagaacaaac tcacattact tggtgctact ggcattgaag atcgtctgca ggagggggtc
     3001 cccgagtcta tagaagccct tcacaaagct ggcatcaaga tctggatgct gacaggggac
     3061 aagcaggaga cagccgtcaa catagcttat gcatgcaaac tcctggagcc agatgacaag
     3121 ctctttatcc tcaatacgca gagtgaagat gcctgtggga tgctgatgag tgcaattttg
     3181 gaagaacttc agaagagaac tcaagtgtct cctgagctgg catcaccgag aaagaacttt
     3241 cctcagcctc ctgaccctca ggtcccagga cgtgcgggac ttgttatcac tgggaagacc
     3301 ctggagtttg ccctacagga gagtctgcaa aagcagttcc ttgagctcac tgcatggtgc
     3361 caagctgtga tctgctgccg agccaccccc cttcaaaaaa gtgaggtggt gaaattggtt
     3421 cgaaaccatc tccatgtgat gaccctggcc attggtgacg gtgccaatga tgttagcatg
     3481 atacaagtgg ccgacattgg gattggtgtt tcaggtcaag aaggcatgca ggctgtgatg
     3541 gccagtgact ttgccatttc ccagttcaga catctcagca agctgcttct cgtgcacggg
     3601 cactggtgtt acacacggct ctccaacatg attctctatt ttttctacaa gaatgtggcc
     3661 tatgtgaatc tccttttctg gtaccagttc ttttgtgggt tttcaggaac atctatgact
     3721 gactattggg ttctgatctt cttcaacctc ctcttcactt ctgtcccccc catcatttat
     3781 ggagttttgg agaaagacgt ttcagcagag accctcctgc agctgcctga actttaccag
     3841 agtggccagc gatccgagga atacttgcct ctcaccttct ggatcacctt gttggatgcc
     3901 ttttatcaaa gcctggtctg cttctttgtg ccttacttta cctaccaggg ctctgacatc
     3961 gacatcttta cctttggcaa tcccctgaac acagccgctc tattgattat tctcctccac
     4021 ctggtgattg aaagcaagag tttgacttgg atccacatgc tggtcattgt tgggagcatc
     4081 ttgtcctact ttttctttgc cttggctttt ggagccttgt gtgtaacttg caacccaccc
     4141 tccaacccat acgggattat gcagaagcac atgctggacc ccgtgttcta cttagtctgt
     4201 gttctcacga cctgcgtagc gcttctgccc aggtttgtat accgagttct tcagggatcc
     4261 gtgtttccat ctccaattct cagagccaag tactttgaca gactctctcc ggaggagaga
     4321 gcagaagctc tcaagaggtg gagagggact gcaaaggtca atcacgtggc atctaagtat
     4381 gccagccaat cagctgctaa gtcaggaaga cccaggcctg gcccttctgt tgcaatgaag
     4441 tcagcgacag tgtgtaccat tgagcagagc acacgtgaga ctgtgctgga ccttggctat
     4501 tctaaacctg gggcatcaac gatgactgaa cccttagcaa gttaaaaaca caggataccc
     4561 tgcttcgagt tgcagataat ctttctagtt aggaaggagg cccctctcag aagtgaggat
     4621 tactcgtaca aggaggaggc tttgtacagg ggatgtcagc attttgctgg gcatggaaga
     4681 accaagaacc tgtctacaac tgtatgccca tgacacattt gtaaacaagg gacagcgttt
     4741 tacctgagca gagtttggga aatggaatat ttaattcagg ataatatatt gggttttttt
     4801 tgtgaaactt tttgattttt gtaaaggaat gttaattgtc ttataaatac caacattttc
     4861 aaagaaactt atttgaaata tatttatttt atacataagt ctcatgcatt tggaaaatac
     4921 tttaggtgag atccaaccta aattctcttt atgaaaaaaa aacttttaaa aattgttcat
     4981 caggaaaact cgttaatttg aagataaatt ctcatgagcc ttttatttcc catgagagga
     5041 ggctttggtt cctgactgaa ggtgtttatc attactccct gtcatttcag cattgtgctg
     5101 agtagagcct ttgtagggaa gggcaaagaa ggctagtgtt tcaacagtac taggctgcct
     5161 ttggctctgt ttactgttat gagtagaccc agagactcct tatgtgcaga tgttgtcaac
     5221 caggaaacag acaaatggtc acgaaacaca atcagctggg cctacaggct gtgggcaact
     5281 cctgggttct gaaattgatg acactcacgt taaaatgaga caatcatctt caaaagtctt
     5341 ccagaggggg cttgagagtt catagctgta aaaatgctca acagcttgtc tgttgtgccc
     5401 gctacagaat gagatatggg tggaaattga tagaggttat cctcagtggg aatctctgag
     5461 gctcttagaa aaataaacat attgaagggt agagatgtct atagcaagtt tctgctgtga
     5521 cagaatgctg gcttcattta gtgtctagaa gctagtttac acaagtagag tcagtttgct
     5581 actgtgaagt catgcactct tgttgaagtt tttcaaagct tccttatcca cctgacagct
     5641 gccacctccc tgttgtctag aattctcttc atgaacctct atgctaaagg tcagtgtcta
     5701 catcaaagtc ttataaactt tttctcaggg cctaactgtt acccgctgtg taccgtccaa
     5761 gtcactttct gtaccttcct ggtatcattg tcaaatggtc ttttcccata gactgatttc
     5821 tggaactgtt acaaaactat gtgtctaaat gaagctgcct tctgcttcct tgagattttt
     5881 ttttaaataa attatttaat aaatgatgtt cactgaaaa
//
