LOCUS       NM_001013931            3233 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus atos homolog B (Atosb), mRNA.
ACCESSION   NM_001013931 XM_238401
VERSION     NM_001013931.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3233)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Dec 2, 2020 this sequence version replaced NM_001013931.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087107.1, SRR21887620.1628473.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-278               JAXUCZ010000005.1  62064336-62064613   c
            279-422             JAXUCZ010000005.1  62060971-62061114   c
            423-1391            JAXUCZ010000005.1  62059755-62060723   c
            1392-1450           JAXUCZ010000005.1  62059157-62059215   c
            1451-1556           JAXUCZ010000005.1  62058896-62059001   c
            1557-1715           JAXUCZ010000005.1  62058617-62058775   c
            1716-1784           JAXUCZ010000005.1  62058327-62058395   c
            1785-1960           JAXUCZ010000005.1  62058054-62058229   c
            1961-3233           JAXUCZ010000005.1  62056654-62057926   c
FEATURES             Location/Qualifiers
     source          1..3233
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q22"
     gene            1..3233
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /note="atos homolog B"
                     /db_xref="GeneID:298201"
                     /db_xref="RGD:1311249"
     exon            1..278
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /inference="alignment:Splign:2.1.0"
     exon            279..422
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /inference="alignment:Splign:2.1.0"
     exon            423..1391
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /inference="alignment:Splign:2.1.0"
     CDS             498..2114
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /note="protein FAM214B; family with sequence similarity
                     214, member B"
                     /codon_start=1
                     /product="atos homolog protein B"
                     /protein_id="NP_001013953.1"
                     /db_xref="GeneID:298201"
                     /db_xref="RGD:1311249"
                     /translation="MRHVQAELSPSSEPEAGPSQPPVTQGTLQGGLLMGYSPAGGATS
                     PGVYQVSIFSPSAGVSEPPRALKRPAPSTEGPRELKRGPGLGAREGLPPEEPSTVGLV
                     SPEGLGLGLGVASQHFSHHGLRVVEQGGSATSSWTSGTQSTPWPSSNASCNTLHTRDW
                     AFPDQGGQGCLGESPGPAPSGQLHTLDTDLHNLAQIGGKSPVARVGNGSNPWPRESHG
                     TANGHSPEHTPPGPGPPGPCPTKRRLLPAGEALDVSSEDEGPAPRRRRGTLGCPLAAN
                     SSDAKATPFWSHLLPGPKEPVLDPTDRSPMGRRLKGARRLKLSSLRTLRKGPGLLSPP
                     SASPFPTPAVSRTLLGNFEESLLRGRFAPSGHIEGFTAEIGASGSYCPQHVTLPVTVT
                     FFDVSEQNAPAPFLGVVDLNPLGRKGYSVPKVGTIQVTLFNPNQTVVKMFLVTFDFSD
                     MPAAHMTFLRHRLFLVPVGEEGNVSPTHRLLCYLLHLRFRSSRSGRLSLHGDIRLLFS
                     RRSLELDTGLPYELQAVTEAPHNPRYSPLP"
     exon            1392..1450
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /inference="alignment:Splign:2.1.0"
     exon            1451..1556
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /inference="alignment:Splign:2.1.0"
     exon            1557..1715
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /inference="alignment:Splign:2.1.0"
     exon            1716..1784
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /inference="alignment:Splign:2.1.0"
     exon            1785..1960
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /inference="alignment:Splign:2.1.0"
     exon            1961..3233
                     /gene="Atosb"
                     /gene_synonym="Fam214b; RGD1311249"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggagccgg ggcggccccg gggagggacc gtcgcaggga ggggtgcaac agcagctaga
       61 ggggctgcgt acgccagagc ccgctagtgt tgcacacgaa gctgatcaga gaagagccaa
      121 gcagagcaag gctctcagcc taagccaccc tttgtctggg ttgggggccc gtagtagggg
      181 ggactggtta tccgagggga gggacaggga tcggaacggg gacgggacgg aagggcccgg
      241 agcagcggcc accgcggcgg agccaatttg ggagtggggg tccaactgag cccaggagct
      301 gcgcggaatg gtggcagtca ccttgccggt gcagtgggca tggaccagac tgcaagctag
      361 agggacaaga catcagacag gaaaagagga cacacgccca ggcttgaggc ttcttcatcg
      421 ggatgtcccc aggcctccca gcccaggccc agcataaagg ccgtgtgggg gggcccccct
      481 gacccaaggg gggcttcatg cgccacgtgc aggcggagct gtctccatcc tcagagccag
      541 aggctggccc ttcacagcct ccagtcacac aggggaccct ccagggtggc ctgctcatgg
      601 gctacagccc agcagggggg gcaacatccc ccggggtcta ccaggtatcc atcttttccc
      661 cttcagctgg cgtctccgag cctcctaggg ctctgaagcg gccggcccct tccactgagg
      721 gtccccggga gctgaagaga ggccctgggc tgggggccag agagggacta ccccccgaag
      781 aaccatctac tgtgggactc gtgagcccag agggactggg tctgggactg ggtgtggcta
      841 gccagcattt ctcccaccat ggcctccgtg ttgtggaaca aggaggtagt gccacctcat
      901 cttggacttc agggacccag agtaccccct ggccctcatc aaatgcttcc tgcaatactt
      961 tgcacaccag agactgggct ttcccagatc aagggggaca ggggtgcctg ggggagtctc
     1021 cagggccagc cccttcaggc cagctgcaca cacttgacac tgatttgcac aatcttgcac
     1081 aaataggggg taagagccca gtggctaggg tgggcaacgg gagcaaccct tggcctaggg
     1141 agtcccatgg aactgccaat gggcacagtc ccgagcacac accccctggc cctggacctc
     1201 caggcccctg ccccaccaag cgaaggctgc tgcctgctgg agaagccctt gatgtcagct
     1261 ctgaagatga gggaccagcc cctcggaggc gccggggaac cctgggctgc cctcttgctg
     1321 ccaatagttc tgatgccaaa gccacaccct tctggagcca cctgctgcct gggcccaagg
     1381 agcctgtttt ggacccaaca gaccgcagtc ccatggggcg gaggctgaag ggcgcccgtc
     1441 gcctgaagct aagctccctt cgaactctcc ggaaggggcc aggcctgctg agccctccca
     1501 gtgcctcccc ctttcccacc cctgctgtca gccgtaccct gctgggcaac tttgaggaat
     1561 cactgcttcg aggacgcttt gcaccatccg gccacatcga gggctttact gcagagattg
     1621 gagccagcgg gtcttactgt ccccagcatg tcacactgcc tgtcactgtc accttttttg
     1681 atgtttctga gcaaaatgca ccggccccct tcctgggagt cgtggacctg aatcctctgg
     1741 ggaggaaggg ttacagtgtg cccaaggtgg gcaccatcca agtgacctta tttaacccca
     1801 accagactgt ggtgaagatg ttccttgtga cctttgactt ctcggacatg cctgctgccc
     1861 acatgacctt cctgcgccat cgcctcttct tggtgcctgt aggtgaggag ggaaatgtta
     1921 gccccaccca ccgcctcctc tgctacttgc tgcacctcag gttccggagc tcccgctcag
     1981 gtcgcttaag cctgcatgga gatatccgcc tgcttttttc ccgccggagc ctggagctgg
     2041 acacagggct cccctatgaa ctacaggctg tgactgaggc cccccataat ccacgttact
     2101 cacctttgcc ctgattgcaa gcgttctgaa cctaggtggg cccaaagcct gctaccctgc
     2161 tccatcctgg acagggtaaa ctgtggagaa atggcaagag ccccttcagg cttgaattaa
     2221 agtcctcacc acgctcacac ccaaattaat catttgggtg tttaaagctt cggtctttcc
     2281 ataccctatc tgctctgggt actccatgtg cctgtcccct cccttgggtt tcccaggcca
     2341 gcttaggtag tagggaggga ccagagctac cctgagattg tcccaagttc ccaggcaagt
     2401 aacgccagcg ttgcctccct gtcctgggca ggggccactt attattttat ttatttttaa
     2461 tttataattt attcaaattg gattgccttg gtgacctccc aaacctgata attggcatca
     2521 ccccactctc agatattgct ccaacctcag gacttgaaga agctgatgtc ggggcaaggg
     2581 gagagctgct ctcctctggc taagggcaga gggtttattc cagaggaact gagtcactta
     2641 gccaaagact cagcttccct cgtttttccc tattcctttt cccttccctg cccttcaacc
     2701 catcttcgaa agccagtgtg tgtatgtgtg tgtgtggtgt gtgtgtagtg tgtgtgtgta
     2761 caactgtgtg tgtgcaccca aacttgggtt tgtgtagggt gtgttgcgcg agagagaatt
     2821 gagtgtatgt gtaacacagg ggtttaacca cctcttacct agggctcaga ctcagttgtc
     2881 cctctcctcc tgcctttgtc tccttgcttt ggtgtcctga ctgaggaagg tgtccaggga
     2941 cagagtcagg cctaaggact ggggaacctc ctcttacctg accagactct gacccaccta
     3001 cctcagctgg gatgaggggt gcccctcatt cagtcatatg gttcccagtt actccactcc
     3061 ccacttaaga ctctgaccca gcctcaaccc ttaactcttg gggcttggct gaggggaaca
     3121 agcatttgct gaaacttgaa aaacaaaaca aaacaaaaaa caggaaaaat tgtacctggt
     3181 acatttttta agggaaaaaa aataaagaat aaattcttgt ttggaaactt gaa
//
