LOCUS       NM_001134879            5557 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus ATPase family, AAA domain containing 2 (Atad2),
            mRNA.
ACCESSION   NM_001134879 XM_001068382 XM_235326
VERSION     NM_001134879.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5557)
  AUTHORS   Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta
            R, Wang NS and Knepper MA.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   2  (bases 1 to 5557)
  AUTHORS   Zou JX, Revenko AS, Li LB, Gemo AT and Chen HW.
  TITLE     ANCCA, an estrogen-regulated AAA+ ATPase coactivator for ERalpha,
            is required for coregulator occupancy and chromatin modification
  JOURNAL   Proc Natl Acad Sci U S A 104 (46), 18067-18072 (2007)
   PUBMED   17998543
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473950.2.
            
            On or before Sep 13, 2008 this sequence version replaced
            XM_001068382.1, XM_235326.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5557
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q33"
     gene            1..5557
                     /gene="Atad2"
                     /note="ATPase family, AAA domain containing 2"
                     /db_xref="GeneID:314993"
                     /db_xref="RGD:1304849"
     exon            1..282
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     CDS             109..4230
                     /gene="Atad2"
                     /EC_number="3.6.1.3"
                     /codon_start=1
                     /product="ATPase family AAA domain-containing protein 2"
                     /protein_id="NP_001128351.1"
                     /db_xref="GeneID:314993"
                     /db_xref="RGD:1304849"
                     /translation="MVVLRSSLELHSHSTISSATDSLDLSSEFLSLEHSGRRRPSLAR
                     AAGKSTVPKAEAAGDGSSVKGVEICHNTRSLRSLRKQAQTSSDSSSDKNVERTEKYCN
                     GRHFTRQLAQQQADKKKEECQEDKAIPVIRSLRNRNIAPSTEHLHEQSGDVEVRRSCR
                     IRTCRYSTMNQSVLFDKLITNTAEAVLQKMDDMKKMRRQRMKKLEDLGVFNETEESNL
                     TMYTRGKRKAIQQADEETTDNQDGSVESSEEGEEQEDDDGEDEEDDEDEEEDGEEDNQ
                     KRYYLRQRKATVYYQAPLEKPRHQRKPNMFYSGPASPARPRYRLSSSGPRSPYCKRMN
                     RRRHAIHSSDSTSSSSSSEDECFERRRKRNRNRAINRCLPLNFRKDEIRGIYKDRMKI
                     GANLADVDPMQLDSSVRFDSVGGLSSHIAALKEMVLFPLLYPEVFEKFKIQPPRGCLF
                     YGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM
                     RPAIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSID
                     PALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPVDMFLEELAENCVGYCGADI
                     KSICAEAALCALRRRYPQIYTTSEKLQLDLSSINISAKDFETAMQKIIPASQRAVTSP
                     GQALSAIVKPLLQNTVHMILEALQKVFPHVEVGTNKALNSDVSFPLLESDLAYSDDDT
                     PSMYENGLSQKNFNQAKENLNFLHLNRNACYQPMSFRPRLLIVGEPGFGQSSHLAPAV
                     IHALEKFTVYTLDIPVLFGISTTSPEEACSQMIREAKRTAPSIVYVPHVHLWWEIVGP
                     TLRATFTTLLQNIPSFAPVLLLATSERPYSALPEEVQELFTHDYGEIFNVQLPDKEER
                     TKFFEDLILKQAAKPPVSQKKAVLQALEVLPVAPPPEPRPLTAEEVKRLEEQEEDTFR
                     ELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLT
                     VKDYLKDIDLICSNALEYNPDRDPGDRLIRHRACALRDTAYAIIKEELDEDFEQLCEE
                     IQESRKKRGCSSSKYAPSYYHVMPKQNSTPVGDKRSDQEQKEKLKAPCTPMASSTPAR
                     LKRKFRKKSKWHVGTKIKRRKISQAKDSSQTAVNSASRSDSEDSQHTRTELGNTGESS
                     VEESDKQNTSESNIDLKNNSSSSNIENELEEPKQTAEGTELKKARIVCSGDAATSQVT
                     DIAEENESKEMGFLRMTRARHSQVEQQQLIGMEKALAILSQPTPSLVVDHKHLKNLLK
                     TVVKKSQEYNIFQLENLYAVLSQCIYEHRRDYDKTALVQKMEQAVENFSCSRS"
     exon            283..431
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            432..481
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            482..650
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            651..753
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            754..841
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            842..994
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            995..1112
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            1113..1220
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            1221..1329
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            1330..1445
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            1446..1620
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            1621..1709
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            1710..1869
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            1870..1960
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            1961..2275
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            2276..2408
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            2409..2595
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            2596..2781
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            2782..2917
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            2918..3114
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            3115..3274
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            3275..3397
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            3398..3541
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            3542..3922
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            3923..4056
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            4057..4185
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
     exon            4186..5557
                     /gene="Atad2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcagtttgtg gcgccagaat tcagagcgcg cgagcgcctg agaagcatcc tccggagctc
       61 cgtatttctc tcccccgcct cgggttccgg cttttgaagc gggacacgat ggtggtcctc
      121 cgcagcagcc tggagctgca cagtcactcc accatctctt cggccaccga ctctctggac
      181 ctgtccagtg agttcctcag tctggaacac agcggccgga ggcggcccag cttggcccga
      241 gccgcgggga aatctactgt gcccaaagcg gaggcggcgg gcgatggatc ctcagttaag
      301 ggagttgaaa tctgccacaa tacacgttct ttaaggtctt tgagaaagca agcacaaact
      361 tcttcggatt ctagttctga taagaatgtg gaaagaacag agaaatactg caatggcaga
      421 catttcacaa ggcagttggc tcaacagcag gctgataaaa aaaaagaaga atgccaagaa
      481 gacaaagcta ttccagttat tcgctcactg aggaatagaa acattgctcc gagtacagaa
      541 catttgcatg aacaaagtgg agatgttgaa gttcgaagaa gttgtaggat tagaacatgt
      601 cgttacagta ccatgaacca gtctgtgcta tttgataagc ttataacaaa cactgctgaa
      661 gctgtacttc aaaagatgga tgacatgaag aagatgcgta gacagcgaat gaagaaactt
      721 gaagatctgg gcgtgttcaa tgaaacagaa gagagtaatc ttacaatgta cacaagagga
      781 aaacgaaagg ctattcagca ggctgatgaa gaaacaacgg ataaccaaga cggcagtgtg
      841 gagtcatctg aagagggtga agagcaagag gatgatgatg gtgaagatga agaagatgat
      901 gaagatgaag aagaagatgg agaagaagat aatcagaaaa gatactacct taggcagaga
      961 aaagcaactg tttactacca ggctccactg gaaaaacctc gtcaccagag aaagcccaac
     1021 atgttttata gtggcccagc ttctcctgca agaccaagat accggttgtc gtcttcagga
     1081 cctagaagtc cctattgtaa acgaatgaac aggcgaaggc atgccatcca cagtagtgat
     1141 tctacttcct cctcctcctc ctctgaagat gaatgctttg agaggagaag aaaaaggaac
     1201 cgaaatagag ctattaacag gtgcctccca ctaaattttc ggaaagatga aataagagga
     1261 atttataaag atcgaatgaa aattggagca aaccttgctg atgttgatcc aatgcaactg
     1321 gattcttcag tgcgatttga tagtgttggc ggcctgtcca gtcacattgc agctctaaaa
     1381 gagatggtgc tgtttccctt actttatcca gaagtctttg aaaagtttaa aattcaacct
     1441 ccaagaggtt gtttgtttta tggaccacct ggaactggaa aaacactggt tgctagagca
     1501 cttgccaatg agtgtagtcg aggggataaa agagtggcgt ttttcatgag gaaaggtgct
     1561 gattgtctga gtaaatgggt aggagaatct gaaagacagc tacgattgct atttgatcag
     1621 gcctatcaga tgcgcccagc aattatattc tttgatgaaa tcgatggtct ggctccagta
     1681 cgatctagca ggcaagatca gattcacagt tctattgttt caaccctgtt agctcttatg
     1741 gatggtttgg acagcagagg agaaattgtg gtcattggag ctaccaacag actagattcc
     1801 atagaccctg ctttacgaag gcctggtcga tttgacagag aattcctttt cagtctacct
     1861 gataaagatg ctcgaaaaga gattctgaag attcatacaa gagattggaa tccaaaacca
     1921 gtggacatgt ttttagaaga actagcagaa aactgtgttg gatactgtgg tgcagatatt
     1981 aagtcaatat gtgccgaagc tgctttatgt gccctgcgtc gacggtaccc tcagatctat
     2041 accaccagtg agaaactaca gttggatctc tcttcaatta atatctcagc taaggatttt
     2101 gagacagcta tgcaaaagat aataccagct tcccagagag ctgtgacatc accgggacag
     2161 gcactgtctg ccattgtgaa accacttctg caaaatactg ttcatatgat cttagaagcc
     2221 ctacagaaag tgtttccaca tgtggaagtt ggaacaaaca aagctttaaa ttcagatgtt
     2281 tctttccctt tgctagagag tgatttggca tacagtgatg atgatacacc gtcaatgtat
     2341 gaaaatggac tttctcaaaa aaattttaat caggcaaaag aaaatttaaa ttttcttcat
     2401 ttaaatagaa atgcctgtta ccagcctatg tcttttcgac caagactatt gatagtggga
     2461 gaaccaggat ttggacagag ttctcacttg gcaccagctg taatccatgc tttggaaaaa
     2521 tttactgtat atacattaga cattcctgtt ctttttggca ttagtactac atctcctgaa
     2581 gaggcatgct cacaaatgat tcgtgaagct aagagaacag cacccagcat agtctatgtc
     2641 ccgcatgtcc acttgtggtg ggaaatcgtt ggcccgacac tcagggccac gttcacaaca
     2701 ttattacaga atatcccttc gtttgctcca gtgttactgc ttgcaacctc tgagagacca
     2761 tactccgctc tgcctgaaga ggtacaagaa ttgtttaccc atgattatgg agaaattttt
     2821 aatgtccagt taccagataa agaagaacga accaaatttt ttgaagactt aattttaaaa
     2881 caagctgcaa aacctcctgt gtcacaaaag aaagcagttc tgcaggcctt ggaggtgctc
     2941 ccggtggcac ctccacctga accaagacca ctgacagcag aagaagttaa acggcttgaa
     3001 gaacaagaag aagatacatt tagagaactc aggattttct taagaaatgt cacacataga
     3061 cttgctattg ataagcgatt ccgagtcttc actaagcctg ttgaccctga tgaggttcct
     3121 gattatgtca ctgtcataaa gcagccaatg gacctttcat ctgtaatcag taaaattgat
     3181 ttacataaat acctgactgt gaaagactat ttgaaggata ttgatctaat ctgtagtaac
     3241 gctttagaat acaatccaga tagagatcct ggagatcgtc ttattaggca cagagcttgt
     3301 gctttaagag acactgccta tgcaatcatt aaagaagagc ttgatgaaga ctttgagcag
     3361 ctttgtgaag aaattcagga atctaggaag aaaagaggtt gtagctcttc caaatatgca
     3421 ccatcttatt accacgtcat gccaaagcaa aattccactc ctgtcggtga taaaaggtca
     3481 gatcaagagc agaaggagaa gctgaaggca ccttgtactc ccatggcaag cagcacccct
     3541 gctcggttga agagaaaatt ccggaaaaag tcaaagtggc atgtaggcac caaaataaaa
     3601 cgaaggaaaa tttcacaagc taaagacagt agccagactg ctgtgaacag tgcaagcagg
     3661 agtgactcag aagacagtca gcatacacgt acagagctcg gaaacacagg ggagtcctca
     3721 gtagaagaaa gtgacaagca gaacacctct gaaagcaaca tagacttgaa aaataactca
     3781 agttcctcca atattgagaa tgaacttgaa gagcctaagc aaactgcaga gggcacagag
     3841 ctgaaaaaag ccaggattgt ttgtagtggc gatgccgcta cctcccaggt cacagacatt
     3901 gctgaagaaa atgaatcaaa agaaatgggg tttctgcgaa tgactcgagc tagacattcc
     3961 caggtagagc agcagcagct gatcggtatg gaaaaggctc tggcgattct ctctcagcct
     4021 acaccttcac ttgttgtgga ccataagcac ttaaaaaatc ttttgaagac tgttgttaaa
     4081 aaaagtcagg aatataatat attccaactg gaaaatttgt atgcagtcct cagccagtgt
     4141 atttatgagc accgcaggga ctatgacaaa acagcacttg ttcagaaaat ggagcaagca
     4201 gtagagaact tcagttgttc cagatcatga tatcattaca ttctagaatt tattcagttc
     4261 ctatttaatt gtctttggat ataattttca taactgatgc tagatgagat gaagtcttgc
     4321 atcttcaaga aaagattaaa atagtaaaag tactttaaat ttcttgatat ttatgtacat
     4381 gtagtaagat aactagtatg tcttaagatg tttaagcaaa gcactgtaac aattgtaatt
     4441 gtttgactag attttaaagc tattttggta attaatgttt tgtgacattt aatgatagct
     4501 tagcagcatt gcatttttgt tactcttagc tgaagcactt ttagttttat cattccctag
     4561 tcggttattg tatcagctag atttgtatct gttgtagttg ctgtctttgt tttcctctaa
     4621 tgcctttctt ccatttgcca aaattcaagt gattttcaag agggcctcaa tacaattctg
     4681 tacttaatat aaaaattaat gcctttagat aaagattttt ataattctaa tttaggttaa
     4741 taaagatttt taaatatatt gtttactttt gtaattatat acacaacaaa tatattagtg
     4801 actagttttt atatttgaca accatttatc tttctatcat tgtgtttagg ttatatccta
     4861 taaatattct ttatctgcac atatatgatt ataaatataa attttctata ctgataccaa
     4921 aaatacattt ctttcttaaa gttgaagccc gttactcctt ctacacactg ttgagtggga
     4981 cattcagacc tctgctttca gagcagtgtg tgctgggcag cttgcggaga gcagccactg
     5041 acgtctggga ggctgtgggg ctttgttagt gttgtaatgg tggtgggaag ggtcagaccg
     5101 agggcccagt gtacactaag tacatgcctc gctcaagagt ttagatttta gcatagttta
     5161 aagttgagct gcctgttttt aaatgtagat atttaaaata tttctaaaat tcagtaattt
     5221 ggatacctta attagtagat gctgtcttat atacctatgc caaacatcga taacatttga
     5281 acatgttcat attgatagag ataatattgt ataggttgag tgtgtatgta tctgggttct
     5341 cagcccttga ggtagagaca ggaagatcaa gaattcaagg tcattagcta cacagtaagt
     5401 ttgaagctag cctggctact tgaaacactg tctcaaaaaa gcaaataaat aaagtattat
     5461 gcttaatagt ttctattgta gtttattata acttatttca gatgtatctt tttattgtac
     5521 attttgtata ataaatatta aagttgaaaa ctgttac
//
