LOCUS       NM_001400023            2046 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus aspartate beta-hydroxylase domain containing 1
            (Asphd1), mRNA.
ACCESSION   NM_001400023 XM_215083
VERSION     NM_001400023.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jan 19, 2022 this sequence version replaced XM_215083.9.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AW521381.1, SRR26360190.257906.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840110, SAMN12840121
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1671              JAXUCZ010000001.1  190985770-190987440 c
            1672-1785           JAXUCZ010000001.1  190984316-190984429 c
            1786-2046           JAXUCZ010000001.1  190983506-190983766 c
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q37"
     gene            1..2046
                     /gene="Asphd1"
                     /gene_synonym="RGD1306636"
                     /note="aspartate beta-hydroxylase domain containing 1"
                     /db_xref="GeneID:293498"
                     /db_xref="RGD:1306636"
     exon            1..1671
                     /gene="Asphd1"
                     /gene_synonym="RGD1306636"
                     /inference="alignment:Splign:2.1.0"
     CDS             813..1895
                     /gene="Asphd1"
                     /gene_synonym="RGD1306636"
                     /codon_start=1
                     /product="aspartate beta-hydroxylase domain-containing
                     protein 1"
                     /protein_id="NP_001386952.1"
                     /db_xref="GeneID:293498"
                     /db_xref="RGD:1306636"
                     /translation="MWKGGNQEAVIEGSGGELGGPGSWGLQDAAGLLARASLPIMFPW
                     PLPLGSSVLTVLLGALTSLFLWYCYRLGSQDMQALGIGSRAGGVSGMPDVCSQTGSRG
                     SGDPGEGHRAEGLVSRRLRAYARRYSWAGMGRVRRAAQGGPGLTGGTGILGIQRPGLL
                     FLPDLPSSPFVPRDAQRHDVELLQSSFPAILRDFGAVSWDFSGSTPLPRGWSPPLAPG
                     CYQLLLYQAGRCQPSNCRRCPGAYRALRGLRSFMSANTFGNAGFSVLLPGARLEGRCG
                     PTNARVRCHLGLKIPPGCELVVGGEPQCWAEGHCLLVDDSFLHTVAHNGSPEDGPRVV
                     FIVDLWHPNVAGAERQALDFVFAPDP"
     exon            1672..1785
                     /gene="Asphd1"
                     /gene_synonym="RGD1306636"
                     /inference="alignment:Splign:2.1.0"
     exon            1786..2046
                     /gene="Asphd1"
                     /gene_synonym="RGD1306636"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttttcgccaa ctcgcgtctg gttcagtgct ggatctggct taaccaagct aggggaaagg
       61 ggtgtcacag gccgacctct ccagggaccc gcaggcccac ggccggattt gcagttcaag
      121 agcaccggcc tcacgcgcgg gtcagggctc ttgccccgcc cccgagtctg ccccgccctt
      181 cttttcgcat tgcggggcgg ctggaggttg gcactgtgcc cctgtacccc acgtggcgct
      241 cggccagggc tgggggaggg ggtctggaga ggcaaatcca gagagaagtc tcccacacac
      301 acaccgcccg tgcagggctg ggctgcggct gcctctggga ggggtcctgg gtagctaagc
      361 agagagggct gcgggaagga gtgacgtcag ggtgagtggg tgcccaagaa ggggtgtgta
      421 ggagatcggg aattcgagag gacggatcag gcccggtcga gggagaagac aggtcaaggg
      481 gagagaaaag agaaagagcc gctatagagt ggggctgcgg gccaggtgga gtagagaccg
      541 ctgttgttaa gggaagctaa aagaaaaaga aggggtaaat aaggaaaggg gggctggagt
      601 ggagggagga gaaacgagct gggagactga gggtggagag agaggaaagg aagaggagac
      661 tgaggggagg agaaaggaga gagggccaca gaaggaagaa aggactagag tcctgagtga
      721 agacaaatag aaaaggggga gagagagcgc tagagggaag tgagggaaag gtctgttggg
      781 gggtcctgta ggaggagtga acaggagtgg ggatgtggaa gggagggaat caggaagcag
      841 tcattgaggg gtcaggtgga gaactggggg gaccagggag ctggggtcta caagatgcag
      901 caggcctctt agccagagcc tctttgccta tcatgtttcc atggccactg cccctaggtt
      961 cctcagttct tactgtgctc ctcggagccc tcacttctct gttcctttgg tactgctacc
     1021 gcctgggctc ccaagacatg caggccctgg ggattgggag cagagctggg ggtgttagtg
     1081 gtatgcctga tgtatgctct cagactggct cacggggctc tggggatcct ggggaaggac
     1141 acagggcaga aggtctagtg agcaggcggc ttcgggccta tgccaggcgt tactcctggg
     1201 ctggaatggg cagagtgagg cgggcagctc agggtggccc tggcctcaca ggagggacag
     1261 ggatactggg cattcagcgc cctggcttac ttttcctacc agacctgcct tcatccccct
     1321 ttgtgccacg tgatgcccag aggcatgatg tggagctcct acagagcagc ttccccgcca
     1381 ttttgcggga cttcggagct gtgagctggg acttctcagg gagtacccct ctgcctcggg
     1441 gctggtcccc acccttggcc cctgggtgct accagctcct gctgtaccaa gcaggccggt
     1501 gccaacccag caactgccgg cggtgcccag gagcctatcg ggcactgaga gggctgcgga
     1561 gcttcatgag tgccaatacc ttcggcaatg ctggcttttc cgttctactg cctggggccc
     1621 ggcttgaggg ccgctgtgga cccaccaatg ctcgagttag atgccatctg ggtctgaaga
     1681 tccctcctgg ttgtgagctg gttgttggtg gtgagcccca gtgttgggct gaagggcact
     1741 gcctcctggt ggacgactcc ttcctgcata cagtggctca taatggatcc cctgaagatg
     1801 ggcctcgagt ggtcttcatc gtggatctct ggcaccctaa cgtggctggg gctgaacgcc
     1861 aagctcttga ctttgtcttc gcaccagacc cttgaaagaa gctgttccct tccagcacct
     1921 gagctggggt gaggctgcac tcaaggacag cttaagtggt ggccaggacc tcttctccac
     1981 tgtgaggggc aggaaggtgt gacttactca gccagcactg aatacaaatt ctgaatcctc
     2041 tcctaa
//
