LOCUS       XM_008767769            1279 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus asialoglycoprotein receptor 1 (Asgr1),
            transcript variant X5, mRNA.
ACCESSION   XM_008767769
VERSION     XM_008767769.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008767769.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008767769.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1279
                     /gene="Asgr1"
                     /gene_synonym="ASGR; RATRHL1; RHL1"
                     /note="asialoglycoprotein receptor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 2 long SRA reads, 17 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 6 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:24210"
                     /db_xref="RGD:2160"
     CDS             173..1015
                     /gene="Asgr1"
                     /gene_synonym="ASGR; RATRHL1; RHL1"
                     /codon_start=1
                     /product="asialoglycoprotein receptor 1 isoform X2"
                     /protein_id="XP_008765991.1"
                     /db_xref="GeneID:24210"
                     /db_xref="RGD:2160"
                     /translation="MRTTTINSREVRDAPFQRGPPPAPRLLQRLCSGFRLFLLSLGLS
                     ILLLVVVCVITSQNSQLREDLRVLRQNFSNFTVSTEDQVKALTTQGERVGRKMKLVES
                     QLEKHQEDLREDHSRLLLHVKQLVSDVRSLSCQMAALRGNGSERICCPINWVEYEGSC
                     YWFSSSVKPWTEADKYCQLENAHLVVVTSWEEQRFVQQHMGPLNTWIGLTDQNGPWKW
                     VDGTDYETGFKNWRPGQPDDWYGHGLGGGEDCAHFTTDGHWNDDVCRRPYRWVCETEL
                     GKAN"
ORIGIN      
        1 tcctgttcag ggatatttgg atattctggg aaattcagga ccaaaagggg gagggctctg
       61 aggggaaaca gcaaactgaa ccccagcctt tttagacctg tctcacccac aaaaaggtcc
      121 tgccccagtg ctatcatgac aaaggattat caagatttcc agcacttgga caatgagaac
      181 gaccaccatc aactccagag aggtgagaga tgctcccttt cagcgagggc cacctcccgc
      241 tccaaggctc ttgcagcgac tctgctctgg attccgtctc ttcctgcttt ccctgggcct
      301 cagcatcctg ctgctggtgg ttgtctgtgt gatcacatcc caaaattccc aactccggga
      361 agatctgcgg gttctaaggc agaatttcag caactttacc gtgagcactg aggaccaggt
      421 caaggccctg accacccagg gagagagagt gggaagaaag atgaagttag tcgagtcaca
      481 gctggaaaaa catcaggagg atctgaggga agaccactct agattgctac tgcatgtaaa
      541 gcagttagtg tctgacgtgc gaagcttgag ctgccagatg gccgcacttc ggggcaatgg
      601 ctctgaaagg atctgctgcc ccatcaactg ggtggagtat gaaggcagct gctactggtt
      661 ctccagctct gtgaagcctt ggacggaagc tgacaagtac tgccagctgg agaacgccca
      721 cctggtggtg gtgacttcct gggaggagca gagattcgtc cagcaacaca tgggcccctt
      781 aaatacttgg attggcctaa ctgaccagaa cggaccctgg aaatgggtgg atgggacaga
      841 ctatgagaca ggcttcaaga actggagacc agggcagcca gatgactggt acggacatgg
      901 gcttggaggg ggtgaagact gtgcccactt caccaccgat ggccactgga atgatgacgt
      961 ctgcaggagg ccctaccgct gggtctgtga gacagagttg ggcaaggcca attaggagcc
     1021 tccattcccc tgatttattt cctgagtgcc ttgagctgtg aggcttagag ttgggaggtc
     1081 ctactcaagg gtctccccat ctttgggaac tttcatctag gattttaagg ggctggtaaa
     1141 gaatggtgtt tgaggaatgt ggtatgatgc ctggtggtgg tggtggtggt ggttattgga
     1201 acccatgaca ctttgtgcag tgtgcagctt actactgcca acttgttttt gagagtaaaa
     1261 gaaggaagat aaacattcc
//
