LOCUS       NM_001107160            1586 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus anti-silencing function 1B histone chaperone
            (Asf1b), mRNA.
ACCESSION   NM_001107160 XM_001072446 XM_222451
VERSION     NM_001107160.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Cui W, Dai X, Marcho C, Han Z, Zhang K, Tremblay KD and Mager J.
  TITLE     Towards Functional Annotation of the Preimplantation Transcriptome:
            An RNAi Screen in Mammalian Embryos
  JOURNAL   Sci Rep 6, 37396 (2016)
   PUBMED   27869233
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Burgess RJ and Zhang Z.
  TITLE     Histone chaperones in nucleosome assembly and human disease
  JOURNAL   Nat Struct Mol Biol 20 (1), 14-22 (2013)
   PUBMED   23288364
  REMARK    Review article
REFERENCE   3  (bases 1 to 1586)
  AUTHORS   Corpet A, De Koning L, Toedling J, Savignoni A, Berger F, Lemaitre
            C, O'Sullivan RJ, Karlseder J, Barillot E, Asselain B, Sastre-Garau
            X and Almouzni G.
  TITLE     Asf1b, the necessary Asf1 isoform for proliferation, is predictive
            of outcome in breast cancer
  JOURNAL   EMBO J 30 (3), 480-493 (2011)
   PUBMED   21179005
REFERENCE   4  (bases 1 to 1586)
  AUTHORS   Tagami H, Ray-Gallet D, Almouzni G and Nakatani Y.
  TITLE     Histone H3.1 and H3.3 complexes mediate nucleosome assembly
            pathways dependent or independent of DNA synthesis
  JOURNAL   Cell 116 (1), 51-61 (2004)
   PUBMED   14718166
REFERENCE   5  (bases 1 to 1586)
  AUTHORS   Umehara T and Horikoshi M.
  TITLE     Transcription initiation factor IID-interactive histone chaperone
            CIA-II implicated in mammalian spermatogenesis
  JOURNAL   J Biol Chem 278 (37), 35660-35667 (2003)
   PUBMED   12842904
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473972.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001072446.1, XM_222451.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158705.1, EV764103.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMN06680433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q11"
     gene            1..1586
                     /gene="Asf1b"
                     /note="anti-silencing function 1B histone chaperone"
                     /db_xref="GeneID:304648"
                     /db_xref="RGD:1304918"
     exon            1..273
                     /gene="Asf1b"
                     /inference="alignment:Splign:2.1.0"
     CDS             165..773
                     /gene="Asf1b"
                     /note="ASF1 anti-silencing function 1 homolog B"
                     /codon_start=1
                     /product="histone chaperone ASF1B"
                     /protein_id="NP_001100630.1"
                     /db_xref="GeneID:304648"
                     /db_xref="RGD:1304918"
                     /translation="MAKVSVLNVAVLENPSPFHSPFRFEISFECSEALSDDLEWKIIY
                     VGSAESEEFDQILDSVLVGPVPAGRHMFVFQADAPNPSLIPETDAVGVTVVLITCTYH
                     GQEFIRVGYYVNNEYPDPELRENPPPKPDFSQLQRNILASNPRVTRFHINWDNNPDRL
                     ETIENQDPNVDFGLPLSCTPVKNLGLPNCIPGLLPENSMDCI"
     exon            274..389
                     /gene="Asf1b"
                     /inference="alignment:Splign:2.1.0"
     exon            390..566
                     /gene="Asf1b"
                     /inference="alignment:Splign:2.1.0"
     exon            567..1586
                     /gene="Asf1b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tggagggcgg agccggctat ttgaagggag cgcgcttacg ggagaagctc ttcggaaaga
       61 agagttggga atcagtgcga gctttctgtc ctgccgaccc ccttcttctc tgtagcaagt
      121 cacggaagaa ggctccacag tacctgcggc tcccaggcga ggtgatggcc aaggtgtcgg
      181 tgctgaatgt ggctgtgctg gagaacccga gccctttcca cagccccttc cggtttgaga
      241 tcagcttcga atgcagtgag gccctgtctg acgaccttga gtggaagatc atttatgtgg
      301 gctcagctga gagcgaggag tttgatcaga tcctagactc agtgctggtg ggccctgttc
      361 ctgcaggaag gcatatgttc gtctttcagg ctgatgcccc aaacccatcc cttattcctg
      421 agacggacgc cgtgggtgtg actgtggttc tcatcacctg cacctaccat ggacaagagt
      481 tcatccgtgt aggctattat gtcaacaatg agtacccaga cccggagctt cgggagaacc
      541 cacccccaaa gccagacttc tctcagttac agcggaacat cttggcctct aacccccggg
      601 tgacccgatt ccatatcaac tgggacaaca atcctgacag gctggaaacc atagaaaacc
      661 aggaccccaa tgtggacttt ggccttcccc tcagttgcac tcccgtcaaa aacctgggcc
      721 tccctaactg catcccaggc ctcctccctg agaactccat ggattgcatc tgacaggggg
      781 cagatagggc tcagtaggac catggcagtc tccttgcaca cctggaggag acctacaagc
      841 ccagacagtc atgcttggtc attctcaagg acttggggac caccagctgt ctccagacct
      901 gtcagcccca atctcttcca tccaggtcca gaagagtcat gtcacttctg acccactggc
      961 ccctaaaagc aggtacttat gttgctcatt cttggtgtca tctttccttc tattctgtgg
     1021 gacgctctca acaccacctg ccttgaggct tgcttgggta gtgcctggct agcattggcc
     1081 agaggctact gctccttcca attctagttc ttgggggctc aggcaaagga ggagttctgg
     1141 ttagaaggcc aactcaatac aaaggctgtc ctttcagagt gtctaggaca ttcggtctaa
     1201 ctagtactag aaagctcccc aaaggtgagc tcccaaggcc aatgagggga tggcaggtac
     1261 ttttggtcat agccatcttc tcatctcctg agcctggctt tctgagagga ctgcactggg
     1321 taggaggtat attagaggtc ctgcttggag tccatggggt ggtcagggtt tgctttgacc
     1381 acatgtgcat tctcatgaga tacccaaatg ctttaggata aaggaggtat ttggcaggct
     1441 gacctgaaaa actcccattc catccacccc taccctaagc ccttcatccc cttgctgcta
     1501 catgtatgct attgtgattg cagtgtgtat attacaaagt tttatattaa aagttttggt
     1561 tggcttaaga ataaaagcac ttcatc
//
