LOCUS       NM_001398588            1471 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus achaete-scute family bHLH transcription factor 5
            (Ascl5), mRNA.
ACCESSION   NM_001398588 XM_017599047
VERSION     NM_001398588.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1471)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000242.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001398588.2.
            
            On Dec 20, 2021 this sequence version replaced XM_017599047.2.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1471              JACYVU010000242.1  33853069-33854539
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q13"
     gene            1..1471
                     /gene="Ascl5"
                     /gene_synonym="RGD1561854"
                     /note="achaete-scute family bHLH transcription factor 5"
                     /db_xref="GeneID:363991"
                     /db_xref="RGD:1561854"
     exon            1..1471
                     /gene="Ascl5"
                     /gene_synonym="RGD1561854"
                     /inference="alignment:Splign:2.1.0"
     CDS             228..794
                     /gene="Ascl5"
                     /gene_synonym="RGD1561854"
                     /note="achaete-scute complex homolog 5"
                     /codon_start=1
                     /product="achaete-scute homolog 5"
                     /protein_id="NP_001385517.1"
                     /db_xref="GeneID:363991"
                     /db_xref="RGD:1561854"
                     /translation="MNSNFCRALVDRGSPGGIQLGVVAPAGPTPLAATEPLGNVPFLL
                     YPGHSEPSYYDAYTGVFPYVPFPGAFGVYDYPFEPAFIQKRNERERQRVKCVNEGYAR
                     LRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSAAPDGAPPTATSPPPAHAGHGNA
                     LQPPSLVAESSGSSFSPSPFLESEEPSL"
ORIGIN      
        1 cagcaggtac ctgctgagcc cctgcaagga aggctctgca cttgtccgga gctatgactc
       61 acattaggaa gtccaagcca tcccaaaaag gcaaaatgaa gccttagcaa ctcgcggcac
      121 cccagagtgc tagcgatgtg acttgtcccc gttgtcagga ccatacagag tctgtgcaga
      181 ggccattcgg tgagggcctc actctgggtc cagctccaca gggaacaatg aacagtaact
      241 tctgtcgagc tctggtggac cgcgggtccc cggggggcat acagctgggt gtcgtggccc
      301 ctgcaggacc gacgccgctg gcagccactg agcccctggg caacgtaccc tttctgttat
      361 acccgggaca ctccgagccg tcttactacg atgcctacac tggggtgttc ccctacgtgc
      421 ccttccccgg tgccttcggg gtttacgact acccgttcga gcccgccttc atccagaaac
      481 gcaacgagcg cgagcggcag cgggtcaagt gcgtgaacga gggctatgcg cgcctccgcg
      541 gccacctccc tggtgccctg gctgaaaaga ggctcagcaa ggtggagaca ctgcgcgccg
      601 ccatccgcta catcaagtac ttgcaggagc tgctgagtgc ggcccccgat ggcgcgccac
      661 ccaccgccac ctccccgccg cccgcccacg ccggccacgg taacgcgctg cagcccccct
      721 ccctggtggc cgagtccagt gggtcctcct tttcgccttc gccttttttg gagtcggagg
      781 aacccagcct ttgatttcgc cagaagcctc gacttgtctc tctagggaac agcttggggg
      841 cttctggatc gcctgtgccg agcaggacag tggtgttcga attctgtgat cccacctcca
      901 accacttgag ccagatgtgc gggcccgggg tagagttggc gagataggga tcccagaagg
      961 tgatgactgc ggtgaggagc agagtcctgg acagctcctg taccagcctc agcgcggctc
     1021 tgttgtccac cacaccaagt cgcactctga ctattatgcg ccatccctgg gccttccaca
     1081 agatggcctc aaatactagc gaggatcttg atggcctcta aagaccagga attctgaggg
     1141 agggacaagg gaagttaaaa ccaggctgct tgcattcagc accctggagc tgacagactt
     1201 gggaggagtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     1261 tgtgtgtgtg tgtgtgtgat gtcgctggtg cccattggct tccttgtcag agagtggtca
     1321 cctcccctct cttacccttt tcagtatagt ctcttctggt cttttcccag gttaagggct
     1381 taaatacctt ccccacccca agacttgtaa gcttctaggg tccaatgaca ttgtgtttac
     1441 atcaagagct aaataaaaag ggattgttga a
//
