LOCUS       NM_001399717            2244 bp    mRNA    linear   ROD 12-JUN-2023
DEFINITION  Rattus norvegicus achaete-scute family bHLH transcription factor 4
            (Ascl4), mRNA.
ACCESSION   NM_001399717
VERSION     NM_001399717.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000185.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001399717.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2244              JACYVU010000185.1  571352-573595       c
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q13"
     gene            1..2244
                     /gene="Ascl4"
                     /note="achaete-scute family bHLH transcription factor 4"
                     /db_xref="GeneID:299687"
                     /db_xref="RGD:1307533"
     exon            1..2244
                     /gene="Ascl4"
                     /inference="alignment:Splign:2.1.0"
     CDS             1070..1507
                     /gene="Ascl4"
                     /note="achaete-scute complex-like 4; achaete-scute complex
                     homolog 4"
                     /codon_start=1
                     /product="achaete-scute homolog 4"
                     /protein_id="NP_001386646.1"
                     /db_xref="GeneID:299687"
                     /db_xref="RGD:1307533"
                     /translation="MEKCKSAGLLALHSPLRASPLGALARREPCRVSARQDTADCARR
                     RPCPSLPPGGVAEPAFLRQRNERERQRVRCVNEGYARLRQHLPRELAGQRLSKVETLR
                     AAIGYIKQLQELLERHRPDLNSDGESKASSGASPCSSEPEERG"
ORIGIN      
        1 ctttctcctt aggattgggg ctctcctctt ttcaaatgct gttttccagt cctcaaggga
       61 ggaaatactt aatgacgaat acaatgggaa aaggctttgc tacgggaaga tatcattata
      121 tcctgagtgg gattagagga ggttgggagg caggactaaa ggtgtgttta cagtaagcac
      181 tctgagaaat aactggctaa aagtgtttgt tactgttcgg gcttttgatg tgtttttaca
      241 gagcagaagg agcataaagg gctttaagtt agaacacaat ttgccaatcc ttaaatttga
      301 tgctaaagca catacagttt attcttgtta cctttgaaac gtgtctaatt tggtttttta
      361 aagattctat ttcgcagaag aaaacctcgt gcttccccgg aggtccaagg aggacttgac
      421 acatcttcta accacaagag agcagtcttc cctttgaaga gcgcttcttc tccacctccc
      481 gagaaatgaa agagccgggg tatgtttgca aacactctga aagctctttc catcagacct
      541 gaacgccgga aaccacaaag ggcagtcaag tttggatttt caagaagaac gccggagtaa
      601 actttcgctc tgccggccag ccgatccggt cagtgccttg ggagggtcct ctgctcaatt
      661 cctgaacaag ttcgggctcc cctgatagcc acacttgcag acccaggagt gaattacagc
      721 aattggacag ctttgaaaga gtatttgttc ggagtgcgat cgcctattca ggctgggacc
      781 ctttgttaac tcttgaacta agatcagagg aggcacatgg atacaaacgt ggataaggct
      841 cgtcctttat ctttgcccct tcttctctga agctttataa agtccggagg agagcaacga
      901 gcttcggaaa ccatgcaaag tcccctccaa gtgtgctcag gtacctagct tctggaccta
      961 gaaacttctc caaagacaga ccgggaagcc tggatggacc agcatcccgg ctacgacagc
     1021 ttccagtctg gtcttcaagg tgagtcaact gcgtgctttt ccgcaaggaa tggaaaaatg
     1081 caaatcggct ggactgcttg ccctgcattc cccgctacga gcctcgccgc tgggcgcgct
     1141 ggcccggagg gagccctgca gggtctccgc gcgccaggat accgcggact gcgcgcgaag
     1201 acggccgtgc ccgtccctgc cgcccggggg cgtcgccgag cccgcctttc tgcgccaacg
     1261 caacgagcgc gagcggcagc gcgtgcgctg tgtgaacgag ggctatgcgc gcctccgcca
     1321 gcacctgccg cgcgagctgg ctggccagag gctcagcaag gtggagacgc tgcgcgccgc
     1381 catcggctac atcaagcaac tgcaagagct gctggagcgt cacaggccgg acctcaacag
     1441 cgatggcgag tccaaagcgt cctccggagc ctcgccctgc agcagcgagc ctgaggagcg
     1501 tggctagcag cgcccttgcc caccaggctt tcatggttgc ttctctgggc tgagttctta
     1561 aaagcaaaaa caagcaaaca aataattaag tgcttctgga tctagaaaag aaaggtaatt
     1621 taatgtttag agggtttggg gatttttttt ccccttccac cttcattggc tcagagcttt
     1681 cagcttacaa atgtttaagg aaactcattt cttgtatatc agaagcacag aaggaccatc
     1741 tcaaatctat gcggtgattt taaaaacaca aagggctgta aggaaccttt gccagagaag
     1801 aaacacacac acacacacac acacacacac acacacacac acacacacac acaccagtcc
     1861 ttcatgtgag aggaacgttc tcatcccttt cctttgggaa atgcactgga aatcttatca
     1921 acacttcact gaaggtgaag gtggctgaga tgacactcta taagacattt gtggagcatc
     1981 tgctggaccc gaacaccggc ctgaatcgcc gtgctaaaaa ggacaatgct tgacacatac
     2041 tggtttgtcc gcaagaggtc gattgggaac tttggcaggt aatgaagcgt cgcgatatta
     2101 atgatctttt tggagatctg aatggccatc tcctctccca gtttctgccc actgtttccc
     2161 tggccctttt ctctgtatgt tcccctgtcc cgttctcata ccgtctaacc tttggttgga
     2221 aaaaataaaa aagcaaatat gctt
//
