LOCUS       XM_039108616            4301 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin repeat and SOCS box containing
            15 (Asb15), transcript variant X1, mRNA.
ACCESSION   XM_039108616
VERSION     XM_039108616.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108616.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4301
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4301
                     /gene="Asb15"
                     /note="ankyrin repeat and SOCS box containing 15; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 3 ESTs, 9 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     5 samples with support for all annotated introns"
                     /db_xref="GeneID:500050"
                     /db_xref="RGD:727860"
     CDS             165..2000
                     /gene="Asb15"
                     /codon_start=1
                     /product="ankyrin repeat and SOCS box protein 15 isoform
                     X1"
                     /protein_id="XP_038964544.1"
                     /db_xref="GeneID:500050"
                     /db_xref="RGD:727860"
                     /translation="MRNTHVHDVDPQEPYAFSWLLEGGNNTYMDIHDDPNDEHLASYD
                     IQLCIQESIEASQAVFHPERSVQLSDQNRKLVEAIRQGHIFELQEYVLHKYALEEADE
                     KGWFPLHEAVVQPIQQILETVLDASYKTLWEFKTCDGETPLTLAIKAGLVENVKTLLE
                     KGVWPNTKNDKGETPLLIAIKQGSYDIVSALIKYNTSLEQPCVKRWSAMHEAAKQGRK
                     DIITLLLNHRGDVHLRDGFGVTPLGVAAEYGHCDVLEHLIHKGGDVFALADDGASVLF
                     EAAGGGNPDCISLLLKYGGSGNVPNRAGHLPIHRAAYEGHYLALKYLIPVTSKHAIEK
                     SGLTPIHSAADGQNAQCLELLIENGFDVNALLADHISQSYDDERKTALYFAVSNNDIH
                     CTEVLLAAGADPNLDPLNCLLVAVRANRHEIVRLLLSYGANVNCYFMHVNDTRFPSAI
                     QYALNDEIMLRLLLNNGYQVELCFDCMHGDIFGNSFVWSEIEEEGLPGWTSCVIKDNP
                     FCEFITVPWMKHLVGNIVRILIDYMDYVPLCAKLKSVLEVQREWPEIRQIIENPCSLK
                     HLCRLKIRRAMGLQRLCQPASMEKLPLPAALQRYLLFKEYDLYGQ"
ORIGIN      
        1 caagtatgat tggtcatcta tgggctcacc tatccaatta gagcataaag ctgggatcca
       61 ttcattgacc tatagaaaac caactcagtc attactatgc atcacagact aaacataatt
      121 attaagttaa ttatgagaga aacagatcaa ggaggaatat attcatgagg aatacccatg
      181 tgcatgatgt ggacccccaa gagccttatg ctttttcatg gttactagag ggtggaaaca
      241 acacttatat ggatattcac gatgatccta acgatgagca tcttgccagt tatgacatcc
      301 agctctgtat tcaggaatcc attgaagcga gtcaggccgt gttccaccct gaaagatcgg
      361 tccaactaag tgaccaaaac agaaagcttg tggaggccat caggcaaggt cacatttttg
      421 agctccagga gtatgtgcta cataaatatg ccctggaaga agcggacgag aaggggtggt
      481 tcccattgca tgaggctgtg gttcaaccca ttcagcagat acttgagacc gttctggacg
      541 catcctataa gacactctgg gaattcaaga cttgtgatgg agaaacgccc ttgactctgg
      601 caatcaaagc tggtctggtg gaaaatgtca agacattgct agaaaaaggg gtatggccca
      661 acaccaaaaa tgacaaagga gagacacctc ttctgattgc tataaaacag ggctcctatg
      721 acatagtatc tgcactgatt aaatacaaca ccagccttga acagccctgt gtcaagaggt
      781 ggtcagcaat gcatgaagca gcgaagcaag gccgcaaaga tattatcact ctgctcctga
      841 atcacagagg tgacgtccac ctgagagatg gctttggagt cacgccctta ggggtggctg
      901 ctgagtatgg ccactgtgat gtgctggagc atcttattca caaaggtggt gatgtgtttg
      961 ctttggcgga tgatggggca tctgtgctat tcgaggcagc aggaggtgga aaccctgatt
     1021 gcatctccct cttgctgaaa tacggaggaa gtggcaacgt acccaacaga gcggggcatc
     1081 ttcccataca tcgagctgcc tatgagggac attatcttgc tctgaaatat ctgatcccag
     1141 taacatccaa acacgcaatt gagaaaagcg gcctaacccc aattcactca gcagccgatg
     1201 gacaaaatgc ccagtgcctc gaactgctca ttgaaaatgg ttttgatgtc aacgccctgc
     1261 tcgccgacca catttcccag agctacgatg acgagagaaa gactgcactg tattttgcgg
     1321 tctctaataa tgatatccac tgcactgaag tccttctggc tgcaggggca gaccccaact
     1381 tagatcccct caactgtctc ctcgtggcag tgagggccaa tagacatgaa atcgtccggc
     1441 tgcttctctc ctatggggct aacgtcaact gttactttat gcatgtgaat gacacgcgct
     1501 tccccagtgc cattcagtac gccctaaatg atgagatcat gctgaggctg ctgctgaaca
     1561 atggttacca agtggagctg tgctttgact gcatgcacgg agacatcttt gggaactcat
     1621 ttgtgtggtc agagatagag gaggagggac tgccgggatg gacgtcttgc gtaataaaag
     1681 ataatccgtt ctgtgagttc attacagttc catggatgaa gcacttggtg ggcaacattg
     1741 tccgcatact gatagattac atggattatg tccctctgtg tgcaaaactg aagtccgtgc
     1801 tagaagtaca gagagaatgg ccggaaatcc gccaaataat agagaatcct tgctcactga
     1861 agcatctgtg ccgattaaaa attcgcagag ctatgggact ccagcgactc tgccagccag
     1921 cctccatgga gaagcttcct ctcccagcag cgttgcaaag atacttgtta tttaaagaat
     1981 acgatctcta cggacaatag ctgaagctaa tataacctta caattatatt ttaaaatgtg
     2041 attcttaaag tattttttta aaaaaactgt gattcccctg gagaagtcac tggaatcatt
     2101 ttgtattctt aagtgtattt aacaccgctg agaattttgt agctgtgtca tgtccctacg
     2161 ggaagaacat gtacactctt aaagacgttt aggcttctaa gataagtaat aggctgtatt
     2221 tgattttcct cagttgttac gagtcttcag attctccctt tcaatgtttg agagtctagg
     2281 cgtaaaaggt aaataacccc tttctcaccc acccccaaac acgcacatat gccagctcta
     2341 gaggagctcc tctgtgtata cagacccacc ctgtgatcca gcttctcctg agcttcttgg
     2401 ctccgtccct aacaacttcc tcactgctaa attctataaa ctactttcgt tcccctcctg
     2461 ttgattcttg tggcatctaa ctccatttcc agttctgtcc ttggtcttta tgatacggat
     2521 actgctattt tccctctcag ccctcctccc caacctctct gcctccgctt ctgtatgctg
     2581 ctcctcttcc tgcaggcacg tcctgcaggc agtgtcacat cctccttcct tttctgatac
     2641 gctgtgttct ctgggaaatt ccattcaatg atcgtggttg tgatcggttt tgctggggac
     2701 cataacgtta gagctgaagt tcaacctttt gtctcctatg tttcagagca gttcctggtc
     2761 gacgttgatc taacagacct ctaaacacaa agatctgtag ttcaccgtgt cctcaaatcc
     2821 ttccttcaca aaacacttga ctcttacatt ctgcagttca acattagctc agtcaattct
     2881 gtttccaaat gaaaaggact tggcattggt cccaacaccc tcgctcccat tttcttaccc
     2941 agcgtgccaa ctcaccaaat gccactgggt ttctctctta ctacacccac catttcctgc
     3001 tcagccccac aaactccctc tacatctgac tgcattcttc ctcttactga ggcaatccag
     3061 tgctgcttat ctgggtcccc tggcctttat ctacagagtc cacccacagc atttcagaat
     3121 gaactgtccg agactttaat agagctcatt cccttgctga aaatcgctcc catcgttttg
     3181 ggataaaaaa aatctcaagc tctctcagga ctgccttgct ttaaggaccc cgtcctctgt
     3241 agcctttctg catgccccac ccccctttgg caacgccctg gttacacatc ttctacagca
     3301 gttcccaggt tttgtggttt tataaaatca gaggttttcg ttttattaat aaaaaaatga
     3361 ggtcctcttt ttaaaggata ccatctatta ccaccaattc agttttaaaa gggggttatt
     3421 ccttagaagg ctagaaaaca ggatggtgat aggctcactc gttaaaatgg attgacgtta
     3481 gctttgaaaa gacggacctt gctattatct cttcgctgac aagcaaaact tcactgtagt
     3541 ccccaagtat ctgagcctct ttgatagaaa acgttgtgaa cctcaggacc tttacatttc
     3601 cttcaccctc tctatctgaa gctttctttc ctctccttta tgcccctggc ccactgatta
     3661 acccttacac tgcagatcct ggctcagctg ttgtttcctc tgggtggagg ccactgcgga
     3721 gagctgttca tgtggtattg tagtgctctg ttccgctaga ctggaagctc cacgggggca
     3781 ggaccgtgtc tgctttactt cccagtatgt cctcaaagcc aaagacacgc cctagaatgt
     3841 gaatgttata caagaaccag actcaaataa tcagtgactt ggtggtaata tgataggtta
     3901 gagtttctga cttggtgtat aacctagtaa tgtacttatt taataatatt taaattgctt
     3961 attattccac tttaatagtg tgttgtttag catttatttt atcataagag taaatattct
     4021 tttggtagta gtatcttact agtttgtaaa ttttcattta ctttcagtta tctttgaaag
     4081 ataaataagt ctggggagaa aattatttaa ttagagttat ggtttcaatg tatctccttg
     4141 aggatatttt aaatacaaat tatttgacaa tgtatttcac tcccaactgt gactgtgatg
     4201 tttcatgtac aatatatcat aattcttgtg ttgctttctt cattgtgctt aaagtcactg
     4261 cttataaatg tttctctaaa taaatgaaaa atagaaatga a
//
