LOCUS       NM_001106962            1317 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus ankyrin repeat and SOCS box containing 11
            (Asb11), mRNA.
ACCESSION   NM_001106962 XM_001067257 XM_217616
VERSION     NM_001106962.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Andresen,C.A., Smedegaard,S., Sylvestersen,K.B., Svensson,C.,
            Iglesias-Gato,D., Cazzamali,G., Nielsen,T.K., Nielsen,M.L. and
            Flores-Morales,A.
  TITLE     Protein interaction screening for the ankyrin repeats and
            suppressor of cytokine signaling (SOCS) box (ASB) family identify
            Asb11 as a novel endoplasmic reticulum resident ubiquitin ligase
  JOURNAL   J Biol Chem 289 (4), 2043-2054 (2014)
   PUBMED   24337577
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474014.2.
            
            [WARNING] On Oct 17, 2024 this sequence was replaced by
            NM_001106962.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_217616.4, XM_001067257.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ224911.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06621351, SAMN11044071
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq14"
     gene            1..1317
                     /gene="Asb11"
                     /gene_synonym="RGD1566298"
                     /note="ankyrin repeat and SOCS box containing 11"
                     /db_xref="GeneID:302666"
                     /db_xref="RGD:1566298"
     exon            1..121
                     /gene="Asb11"
                     /gene_synonym="RGD1566298"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..912
                     /gene="Asb11"
                     /gene_synonym="RGD1566298"
                     /note="ankyrin repeat and SOCS box-containing protein 11;
                     ankyrin repeat and SOCS box containing 11, E3 ubiquitin
                     protein ligase"
                     /codon_start=1
                     /product="ankyrin repeat and SOCS box protein 11"
                     /protein_id="NP_001100432.1"
                     /db_xref="GeneID:302666"
                     /db_xref="RGD:1566298"
                     /translation="MLQLAAEEGVRRPGPWKEITFGDYICHTFQGDCWADRSPLHEAA
                     AQGRLLALKTLIAQGINVNLVTINRVSSLHEACLGGHVACAKALLENGAHVNGLTVHG
                     ATPLFNACCSGSAACVNVLLEFGAKAQLEVYLASPIHEAVKRGHRECMEILLANNVNI
                     EQEIPQLGTPLYVACTYQRVDCVKKLLELGASVDHGRWLDTPLHAAARQSSVEVINLL
                     TEYGANLKLRNSQGKSALELAAPKSSVEQALLLHEGPPALSQLCRLCVRKCLGRTCHQ
                     AIYALGLPEPLEKFLLYQ"
     exon            122..201
                     /gene="Asb11"
                     /gene_synonym="RGD1566298"
                     /inference="alignment:Splign:2.1.0"
     exon            202..309
                     /gene="Asb11"
                     /gene_synonym="RGD1566298"
                     /inference="alignment:Splign:2.1.0"
     exon            310..460
                     /gene="Asb11"
                     /gene_synonym="RGD1566298"
                     /inference="alignment:Splign:2.1.0"
     exon            461..595
                     /gene="Asb11"
                     /gene_synonym="RGD1566298"
                     /inference="alignment:Splign:2.1.0"
     exon            596..787
                     /gene="Asb11"
                     /gene_synonym="RGD1566298"
                     /inference="alignment:Splign:2.1.0"
     exon            788..1317
                     /gene="Asb11"
                     /gene_synonym="RGD1566298"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tctaaagacg agctctaaag cagcagaatg cttcaactag ctgctgaaga aggtgtcaga
       61 aggcctggac catggaaaga gattactttt ggggattata tatgtcacac gtttcaggga
      121 gactgctggg ctgatcggtc cccactccac gaggctgcgg cccaagggcg cttactggct
      181 cttaaaactt taattgcaca aggcatcaat gtgaatctgg taacaatcaa ccgggtctcc
      241 tctctccacg aggcatgcct tgggggtcat gtggcctgtg ctaaggcctt actggaaaat
      301 ggtgcacatg tcaacggact gactgtccat ggggccactc ccctcttcaa tgcttgctgc
      361 agtggcagtg ctgcctgtgt caatgtactg ttggagtttg gagccaaggc ccagcttgag
      421 gtctacctgg cttcacctat ccatgaagca gtgaagagag gtcacagaga gtgcatggag
      481 attctgctgg caaataatgt taacattgaa caagagattc ctcagctggg aactcctctg
      541 tatgtggcct gtacatacca gagagttgat tgtgtgaaga agcttctaga actaggagcc
      601 agtgttgacc acggtcggtg gctggatacc ccactgcatg ctgcagcaag gcagtccagt
      661 gtggaggtca tcaatctgct cactgagtat ggggctaacc tgaaactcag aaactcgcag
      721 ggcaaaagtg ctcttgagct cgctgctccc aaaagtagtg tggagcaggc actcctgctc
      781 catgaaggtc cacctgctct ttctcagctc tgccgcttgt gtgtccggaa gtgcttgggc
      841 cgcacatgtc atcaagccat ctacgcacta ggtctgccag aacccctgga aaaattcctc
      901 ttataccaat agttggaaac atgttgcctg ctgtaggaca cttaatatac acattcagtg
      961 gcttaaccca ctatcctaaa aatctgctta cctaattaga ataaagcctt cataaatcca
     1021 aatacttgcg ttgaacaaac tcctggttag tttaatggtt gccaagagat aaccagaaac
     1081 ctttcagttt ttaactcttg ttaatttaaa atcaaactga aatagatgga aaataataat
     1141 ctatttttgg ataattcagg accctccagt atctggggct ggggtccgca ttttgaatac
     1201 tgaatagaca cacacacagg tagataaggt taaattaaac tacttaaaga atgccctgga
     1261 ttcagtcctc cagtatattt ttttagtttg ttgttttcct aaaataaatt tctgtag
//
