LOCUS       XM_039113143            5492 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ArfGAP with SH3 domain, ankyrin repeat
            and PH domain 2 (Asap2), transcript variant X1, mRNA.
ACCESSION   XM_039113143
VERSION     XM_039113143.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5492
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5492
                     /gene="Asap2"
                     /note="ArfGAP with SH3 domain, ankyrin repeat and PH
                     domain 2; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 24 ESTs, 1 long SRA read, 12
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 33 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:362719"
                     /db_xref="RGD:1305263"
     CDS             36..3047
                     /gene="Asap2"
                     /codon_start=1
                     /product="arf-GAP with SH3 domain, ANK repeat and PH
                     domain-containing protein 2 isoform X1"
                     /protein_id="XP_038969071.1"
                     /db_xref="GeneID:362719"
                     /db_xref="RGD:1305263"
                     /translation="MPDQISVSEFVAETHEDYKAPTASSFTTRTAQCRNTVAAIEEAL
                     DVDRMVLYKMKKSVKAINISGLAHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFS
                     VFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKITKI
                     EKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKVKKGVDLLQ
                     NLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSA
                     LQVEQKESRRDSQLRQSTAYSLHQPQGNKEHGTERNGNLYKKSDGIRKVWQKRKCSVK
                     NGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWM
                     SVLQNSKEEALNNAFKGDDNTGENNIVQELTKEIISEVQRMTGNDVCCDCGAPDPTWL
                     STNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCL
                     PPEDPVKPNPGSDMIARKDYITAKYMERRYARRKHADTAAKLHSLCEAVKTRDIFGLL
                     QAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKG
                     STALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLIQALSG
                     RFNSHVHVEYEWRLLHEDLDESDDDVDEKLQPSPNRREDRPVSFYQLGSSQFQPNAVS
                     LARDTANLTKDKQRGFGPSILQNETYGAILSGSPPSSQSVPPSTTSAPPLPPRNVGKV
                     QAATSANTLWKTNSVGVDGISRQRSSSDLPAVHPPLPPLRVTSTNPLTTTPPPPVAKT
                     SGTLEAINQPSKSSQPGTSQSKPPPLPPQPPSRLPQKKPASGTDKPTPLINKGQPRGP
                     EASGPLSNAMALQPPAPMPRKSQATKSKPKRVKALYNCVADNPDELTFSEGDVIIVDG
                     EEDQEWWIGHIDGEPSRKGAFPVSFVHFIAD"
ORIGIN      
        1 gaggcggcgg cggtccgcgc cccggcgccg cggcgatgcc ggaccagatc tccgtgtcgg
       61 aattcgtggc cgagacccat gaggactaca aggcgcccac ggcctctagc ttcaccacgc
      121 gcacggccca gtgccggaac accgtggcgg ccatcgagga ggctttggac gtggaccgga
      181 tggttctcta caaaatgaag aaatctgtga aggcaatcaa tatctctggg ctggcacacg
      241 tggagaacga ggaacagtac acccaggctc tggagaagtt cggtggcaac tgtgtatgca
      301 gagatgaccc agacttagga agcgcgtttc tgaagttctc tgtgttcacc aaggagttga
      361 ccgcactctt caaaaacctg attcagaata tgaacaacat catctcgttc cctttggaca
      421 gtttgctgaa aggagatctg aaaggagtaa aaggggatct gaaaaagccc tttgataaag
      481 cttggaagga ctatgaaacg aaaataacca aaatagagaa ggagaagaag gaacacgcca
      541 agctccatgg gatgattcga accgaaataa gcggggctga gattgcagag gagatggaaa
      601 aggaaagaag gttcttccag ctgcagatgt gtgagtacct gctgaaggtc aatgaaatca
      661 aggtgaaaaa gggagtggat ttgcttcaga atctgatcaa gtatttccac gcccagtgca
      721 attttttcca ggatggattg aaagcagtag aaagcctcaa gccttccatc gagacgctct
      781 ccacggacct ccacacgatc aaacaggccc aggatgagga acgacgacag ctgatacaac
      841 ttcgagatat tttgaaatca gccttacagg ttgaacagaa agagtctagg agagactcac
      901 aacttcgcca aagtacagcg tacagcttac atcaacctca gggaaacaag gagcatggga
      961 cggagaggaa cgggaacctc tacaagaaga gtgacgggat ccggaaggtg tggcagaaga
     1021 ggaagtgttc cgttaaaaat ggcttcctca ccatctccca cggcactgcc aaccggccgc
     1081 ctgccaagct caacttgcta acctgccagg tgaagaccaa ccccgaggag aagaagtgct
     1141 tcgacctcat atcacatgac aggacgtacc acttccaagc ggaagacgaa caagaatgtc
     1201 agatatggat gtctgtgctg cagaacagca aggaagaagc tctgaacaac gcgtttaagg
     1261 gtgatgacaa caccggagag aataacatcg tccaagagct gaccaaggag atcatctcgg
     1321 aggtgcagag gatgacgggc aatgacgtgt gctgcgactg tggggcacca gatccgacgt
     1381 ggctctctac caacctgggc atcctgactt gcatcgagtg ctctgggatc caccgggagc
     1441 tgggggttca ttactccagg atgcagtccc tgaccttaga tgtattggga acgtctgagc
     1501 ttctgcttgc caagaatatt gggaatgcgg gctttaatga aatcatggag tgttgcctac
     1561 cgcctgagga cccagtcaaa cccaacccag gcagcgacat gattgcaagg aaggactaca
     1621 tcacagccaa gtacatggag aggagatacg cacggagaaa gcatgcggac acagcggcga
     1681 agctccacag cctttgcgag gccgtcaaga ccagagatat tttcgggtta ctccaagctt
     1741 atgctgatgg tgtggacctg acggagaaaa tcccactggc caacggtcat gagccagatg
     1801 agacagccct ccatcttgca gtcagatctg tggaccggac ttcccttcac attgtagact
     1861 tcctcgtcca gaacagtggg aacctggaca aacagacagg taagggcagc acagccctgc
     1921 actactgctg cctgaccgac aatgctgagt gcctcaagct cctcctgcgg ggaaaggcct
     1981 ccattgagat cgccaatgag tcaggagaga ccccgttgga cattgccaag cggctcaagc
     2041 atgaacactg tgaggaactg ctcattcagg ccttgtcagg gaggtttaac tcccacgttc
     2101 acgtcgagta cgaatggcgg ctgctgcacg aggacctgga tgagagcgac gatgatgtgg
     2161 acgagaagct acagcctagt cccaaccgac gggaggaccg gcctgtcagc ttctaccagc
     2221 tggggtccag ccagtttcag cccaatgctg tgtctttggc cagagatact gcaaacctca
     2281 ccaaggacaa gcagaggggc ttcgggccca gcatcttgca gaatgagacc tatggagcca
     2341 tcctgagtgg cagcccaccc tcatcccagt cagtaccccc cagcaccacc agcgcacccc
     2401 cactcccacc tcggaatgtt ggcaaagttc aggcagccac ctcagctaac accctgtgga
     2461 agacaaactc tgtaggtgtg gacggtatca gcaggcagcg atcttcgtca gatctgccag
     2521 ctgtccaccc accgctgccc cctcttcgag tgacatctac caatcccctg accaccacac
     2581 caccccctcc tgtggctaag acatcaggaa ctttagaagc cataaaccag ccaagcaagt
     2641 cctcccaacc cgggacctca cagagcaagc ccccacccct gccaccccag ccacccagcc
     2701 gcctgcctca gaagaagcca gcttctggga ctgacaagcc aaccccgctg atcaacaaag
     2761 gacagccaag aggacctgaa gcttcgggtc ctctgtccaa cgccatggcc ctgcagcccc
     2821 cagcacccat gcctaggaag tcacaggcca ccaagtcaaa gcccaagcga gtcaaagcgc
     2881 tctacaactg cgtggctgac aacccggacg agctgacttt ctctgagggg gatgtgatca
     2941 ttgtggatgg agaagaggat caggagtggt ggattggcca cattgatgga gagcccagcc
     3001 gcaaaggagc gtttcccgta tcgttcgtgc actttattgc tgactaaact gccactgaac
     3061 agaagcctct gtttcaccct tatgttccat tttgttactg gtcccaaggc cagccatacc
     3121 atttccatgg accgggttgt acggcagccc atcttttcac gatcctgtcc cattctgaaa
     3181 actcagaggc aaggtttata tataagcagg attttctttt tttttttttt tatataagtt
     3241 gtggttttca tgcaacattg ctatacttct actaggaaaa gcggaatttc ctaaaaaggg
     3301 ggggatgaga agctatttaa ccttataccc aggatcctgt atttccagga gtaactaagc
     3361 aaaaaaccag cttcaacaaa tttgagggat tcttatggct ttccttagcc cagttctcac
     3421 gttggttatc ttgtttagca cagtcaggtt agcaagccag ccccatactg cttcccagtc
     3481 tgtcgccctc ccctggactt tgaccacaaa tgccatccat tcacctttaa agacatgtat
     3541 ccctttgaaa ctcagccagt gtctgttcaa ggcaacttgg caagttatat gttagccttg
     3601 tacttttctg gaccctgact gtaagggggc agctgtcatg acctcctgca tgtattacga
     3661 cccgtggttg tgaacagtca tgcctagcat actactgatg ggttattaca gcatagctga
     3721 cggtggtctg ttctgcaccg ggtgttttta aactgcagat cctgaatttg gttgaacact
     3781 aaggatgctg aatcgcaaag cagcccttca aactagcttt tatcgtatgc ctgggtgttt
     3841 taggatttgc cgtgttcagc gtcccctgtc atgcaggaag caactgtaca gaagtagaat
     3901 acgtggtgca ggccacagta agaagagccc attcctccat gtcctagtgc gtgctcctgc
     3961 cttcccctcc cagctcctgg ggacacctgc tcggcttagt tcttgtcttt taataggatt
     4021 ctccaagaga aatggtagct acactgtctt gaaatttagc ctatccaatt gtttgtattc
     4081 aagagcatat cagaaatctg tagatcttgg ggagcccagt acccccaaac gtcccattta
     4141 cactacgtaa gcccatcaca tcactcctaa acttacaatc tgtggggtgg gggaggggaa
     4201 ctaggttgtg tgtgataaaa atcataactc attagtttca tgaacttgac tgtcatacct
     4261 ctgcttagta actgtaagca aaagagtcat ggttgggata tgggaaatga gaggcgagca
     4321 tagagcttga acagaagctg gagtgtgagc aaaaggaatg gactatggat taaggattga
     4381 gctcgacagt gaggcgatgt tgctgccaag gtgcagcact taatcgaagc agccccttct
     4441 ttactctctg tgcaaggctc ttacaagctc ggagcttccc tttctttgtt tctttcaagg
     4501 aaaacaggac aaactggaat gtcttatgat gctacatagt gactgcttcc tgtctttcag
     4561 attctgggtg aaaacaacgt gttagatctg taaagtcagt atctctctct ctctctctct
     4621 ctctctctct ctctctctct ctctctctct ccccccccca cctctcccca cactgcatct
     4681 gtttttcact acttgctaat ttctgtcctt tgagcccttc tcctagtcac gtttttcgta
     4741 gactgaagag cgtgaccaga tgcattttgc acattgcact tcccaatacc ttttacagtg
     4801 cctcccgccc gaccccacac gcatctgtct catcggtctt tagtgacctg gtgccagctc
     4861 tgaggaatct agttgattta tgtcaacatt ttacctccag tcccaagcta atctatcagg
     4921 ttcactggta cataaatacc taggaaatat ttttccactc taatttggtg gcgctattgt
     4981 gcgctaatgg atagtacttt ttaccagaag agaaaaatct attgacttcc ctcctaatta
     5041 tcctttctgt tacttgctct ttgcaaatcg aagagaaagc aacggaaagg aaagcattgt
     5101 agatatctat ttatatttaa ggtttacatt ttcatgagag tcagctgcgg aattcgggct
     5161 tcttttattt tattttttta attttttgcc gctttccatc attctgatgt ggagggcgga
     5221 tgactcagaa aagggtgcac agactaatgt catctattga gggtggagaa tgacctgtag
     5281 ccgagaacgc tattttgaga tgtatgatat tcaattcatt cacttgatta ctttggtctg
     5341 gttgcagcgc aactgtatat actgtataac ctagacggat tattttcatt gtccttattg
     5401 cagtgattta taattagggc atgtttaata aattgacttc ccgttaacca gtcatttgac
     5461 tggaaaaaaa aaataaagtt cttttaaatg ga
//
