LOCUS       NM_001047887            3605 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus arylsulfatase family, member J (Arsj), mRNA.
ACCESSION   NM_001047887 XM_001076005 XM_227873
VERSION     NM_001047887.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3605)
  AUTHORS   Sardiello,M., Annunziata,I., Roma,G. and Ballabio,A.
  TITLE     Sulfatases and sulfatase modifying factors: an exclusive and
            promiscuous relationship
  JOURNAL   Hum Mol Genet 14 (21), 3203-3217 (2005)
   PUBMED   16174644
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Oct 6, 2022 this sequence version replaced NM_001047887.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BN000740.1, SRR26360186.76487.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1244              JAXUCZ010000002.1  217449147-217450390
            1245-3605           JAXUCZ010000002.1  217526782-217529142
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q42"
     gene            1..3605
                     /gene="Arsj"
                     /gene_synonym="RGD1307640"
                     /note="arylsulfatase family, member J"
                     /db_xref="GeneID:311013"
                     /db_xref="RGD:1307640"
     exon            1..1244
                     /gene="Arsj"
                     /gene_synonym="RGD1307640"
                     /inference="alignment:Splign:2.1.0"
     CDS             853..2646
                     /gene="Arsj"
                     /gene_synonym="RGD1307640"
                     /EC_number="3.1.6.12"
                     /codon_start=1
                     /product="arylsulfatase J"
                     /protein_id="NP_001041352.1"
                     /db_xref="GeneID:311013"
                     /db_xref="RGD:1307640"
                     /translation="MAPRDSAEPLPPLFPQARVWPGKMVAMGALAGFWVLSLITYGYL
                     SWGQDLEEEGSLRAQVEERPEAGTAVTSQPHLIFILADDQGFRDVGYHGSEIKTPTLD
                     KLAAEGVKLENYYVQPICTPSRSQFITGKYQIHTGLQHSIIRPTQPNCLPLDNATLPQ
                     KLKEVGYSTHMVGKWHLGFYRKDCMPTKRGFDTFFGSLLGSGDYYTHYKCDSPGVCGY
                     DLYENDNAAWDYDNGIYSTQMYTQRVQQILASHDPTKPLFLYVAYQAVHSPLQAPGRY
                     FEHYRSIININRRRYAAMLSCLDEAIHNVTLALKRYGFYNNSIIIYSSDNGGQPTAGG
                     SNWPLRGSKGTYWEGGIRAVGFVHSPLLKNKGTVCKELVHITDWYPTLISLAEGQIDE
                     DIQLDGYDIWETISEGLRSPRVDILHNIDPIYTKAKNGSWAAGYGIWNTAIQSAIRVQ
                     HWKLLTGNPGYSDWVPPQAFSNLGPNRWHNERITLSTGKSIWLFNITADPYERVDLSS
                     RYPGIVKKLLRRLSQFNKTAVPVRYPPKDPRSNPRLNGGVWGPWYKEESKKKKTNKTK
                     AKKMQKKSKARTRKQRAARSSTKCHPRVTTG"
     exon            1245..3605
                     /gene="Arsj"
                     /gene_synonym="RGD1307640"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaggaagaa ggcacagatg gctagaacta agtcaaccac ccaagggcac gctggagcag
       61 ctgcagcacc cacaggggac acgtgcgctc tgcgatcgcc ggccaggact ccgtgagtgt
      121 ccccgagcgc ggcagggtag agaaggaatt gccgggagag aaggccggct ggggcaggat
      181 cctttctcac ttcgggcccc ggaaaggggt caagaggatt gacaaatgca cagcggaaac
      241 tggggaacca gccctgaaaa ggtagggaaa gcggccagca ggaagaaggt ctgctcggat
      301 cagcctgtca ttcatccata agcaaggagt tgcccagggc aacttggcaa ggcttcccgg
      361 gtgccgggaa ctctgaacga tgtcagtccc accacctctg gtgcctgcct gcttgtgggc
      421 acagtcctgc tccccgaaga tgtggaggac gatataacta tcagatgtcc ctgtcttgtg
      481 tggctatcat tccctttctt gtcttttttt ttcccccttc ttcttcgtga gaacttttgg
      541 atgaagatac taactttttt tcctgccaag ctgccgagtg atgttaggag gttaaaaaaa
      601 attaaaaata aaaataaaaa ctgcaagtcg atgaagagga cctctgctct ctagcagttt
      661 ttctagcgtt catgtgttaa accatcacct ccagaggatt gaagttgtgg gaagtggtag
      721 catcgcggaa gggagcagga ttccctcgca gccttctttc agcgagacct accccttcgc
      781 atgcatgagt gtgccagcag cagcaaaagg ggcagggttc tgcttgtgta atccctgctg
      841 ggaccagagt gaatggcccc cagggacagt gcggagcctc tgcctccgct ctttccacag
      901 gccagggtct ggcctggaaa gatggtagcg atgggtgccc tggcaggctt ctgggtcctc
      961 agcctgatca cctatggcta cctgagctgg ggccaggact tagaagagga ggggtcccta
     1021 agggctcaag ttgaagagag acctgaagca ggcacagcag tcacctccca gccccatctc
     1081 attttcatac tagctgatga tcagggattt agagacgtgg gttaccacgg atctgagata
     1141 aagactccca ctcttgacaa actcgctgcg gaaggagtta agctagagaa ctactatgtc
     1201 cagcctattt gcacgccgtc caggagtcag tttattaccg gaaagtatca gatacacaca
     1261 ggacttcagc attctatcat tagacctacc caacccaact gtctacctct ggacaacgca
     1321 accctacctc agaagctgaa ggaggtcggc tattcaaccc atatggttgg gaagtggcac
     1381 ttgggatttt acagaaaaga ctgcatgcct accaagagag gatttgacac cttttttggc
     1441 tcacttttgg gaagtggtga ttattacaca cactacaaat gtgacagtcc tggggtgtgt
     1501 ggctatgact tgtacgaaaa cgacaatgcc gcttgggact atgacaatgg catctactca
     1561 acacagatgt acactcagag agtgcagcaa atcttagcct cccacgaccc cacaaagcct
     1621 ctgtttttat acgttgctta ccaagctgtc cactcaccac tgcaagcccc tggcaggtac
     1681 tttgaacact atagatccat tatcaacata aacaggagga ggtatgcggc catgctctcc
     1741 tgcctggatg aagcgatcca caatgtgacc ctggctctaa agaggtatgg tttctataac
     1801 aatagcatta tcatttactc ctcagataat ggtgggcagc ccacagcagg aggaagtaac
     1861 tggcctctca gaggcagcaa aggaacatat tgggaaggag gcatccgggc agttggcttt
     1921 gtgcacagcc cacttctgaa aaacaaggga acggtgtgta aggagcttgt gcacatcacc
     1981 gattggtacc cgaccttgat ttcactggct gaaggacaga ttgatgaaga cattcagcta
     2041 gatggatacg atatctggga gaccataagc gaaggtcttc gttcaccccg agtggatatt
     2101 ttgcacaaca ttgaccccat ctataccaag gcaaaaaatg gttcctgggc agcaggctat
     2161 ggaatctgga acaccgcgat ccagtcggcc atccgggtgc agcactggaa actgctcaca
     2221 ggaaatcctg gctacagtga ctgggtcccc cctcaggctt tcagcaatct gggcccaaac
     2281 cggtggcaca atgaaaggat taccttgtca actggcaaga gtatctggct tttcaacatc
     2341 acagctgatc catatgagag ggtggaccta tccagcaggt atccaggcat tgtgaagaag
     2401 ttgcttcgga gactgtcaca gttcaacaag acagcggtgc ctgtcaggta ccccccgaag
     2461 gatcccagaa gcaaccctag gctcaacgga ggagtctggg gtccgtggta taaagaggaa
     2521 agcaagaaaa agaagacaaa caaaaccaag gctaagaaaa tgcaaaagaa aagtaaggct
     2581 aggacgagga agcagagggc agctcgctcc tcaacaaaat gccacccaag agttaccact
     2641 ggctaaatgc tttggttaaa cttatattgc ctggtttcta ggtaattcag agaatttggc
     2701 tcagacatac ctcagccaag cgcctcgggc ttgttttcac attgctccgt gccagagact
     2761 tctggcacct ggctgccatg tggacaaaac taccctcctg ggtgccaaag gctatgcttc
     2821 tgcaggccac acaaggagga gaaagcggct acttatttat ccctagtctg tgtaaaccgt
     2881 gacgaatcat gagtcagttg accaaacaaa atgctttgaa tcccttgaat cacgagaggg
     2941 actgtgaccc gcggtagact tgagtaatta cagggtaaca cgattaaaaa atgactttgg
     3001 atgtagtcag agattgtgtt ccctcaaaga cctaaaaaaa cagtgcttct agatgaaaaa
     3061 attgtgtatg tatcacatga aacttgggct tttaagctac ttttatttca cgttgctgtc
     3121 gcctgttctc tgagaaaaac ctgcttctct tccgtggaca gcttgcacct catctcatcc
     3181 tgcttaaagg aacggcagac aatgtctgag cattgccaga aatgaatgta actatgtccc
     3241 aaacactttg ataaaacaaa aatttcaata taaagtgcct aatttatttt ttcaaaaaag
     3301 ttaagcaagt gattttaatt attttatttt agtttctacg taagaatttt atttcaattc
     3361 tttatggttc ctaagcactg taataccata agttactgta attttatggt tgttcataaa
     3421 ctataaaagg aaactcattc ataaaaatta cagtcaccat attttaccat tatttggatg
     3481 taaggagatg aatatatttt taaacttttg taagtttgtt gttatacaga gttgatttga
     3541 ctttattgtt cccaacataa actatttatg tatattaatt attaaagtga tttattttat
     3601 ggcaa
//
