LOCUS       NM_001393761            3944 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus arrestin domain containing 4 (Arrdc4), mRNA.
ACCESSION   NM_001393761 XM_006229367
VERSION     NM_001393761.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3944)
  AUTHORS   Mackenzie,K., Foot,N.J., Anand,S., Dalton,H.E., Chaudhary,N.,
            Collins,B.M., Mathivanan,S. and Kumar,S.
  TITLE     Regulation of the divalent metal ion transporter via membrane
            budding
  JOURNAL   Cell Discov 2, 16011 (2016)
   PUBMED   27462458
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3944)
  AUTHORS   Shea,F.F., Rowell,J.L., Li,Y., Chang,T.H. and Alvarez,C.E.
  TITLE     Mammalian alpha arrestins link activated seven transmembrane
            receptors to Nedd4 family e3 ubiquitin ligases and interact with
            beta arrestins
  JOURNAL   PLoS One 7 (12), e50557 (2012)
   PUBMED   23236378
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Mar 8, 2021 this sequence version replaced XM_006229367.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ222682.1, SRR26360190.3038867.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-486               JAXUCZ010000001.1  131792940-131793425 c
            487-553             JAXUCZ010000001.1  131788871-131788937 c
            554-701             JAXUCZ010000001.1  131788529-131788676 c
            702-804             JAXUCZ010000001.1  131786374-131786476 c
            805-1061            JAXUCZ010000001.1  131784100-131784356 c
            1062-1224           JAXUCZ010000001.1  131783414-131783576 c
            1225-1379           JAXUCZ010000001.1  131782359-131782513 c
            1380-3944           JAXUCZ010000001.1  131779437-131782001 c
FEATURES             Location/Qualifiers
     source          1..3944
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..3944
                     /gene="Arrdc4"
                     /gene_synonym="Ab1-209; LRRG00117"
                     /note="arrestin domain containing 4"
                     /db_xref="GeneID:293019"
                     /db_xref="RGD:1311763"
     exon            1..486
                     /gene="Arrdc4"
                     /gene_synonym="Ab1-209; LRRG00117"
                     /inference="alignment:Splign:2.1.0"
     CDS             189..1436
                     /gene="Arrdc4"
                     /gene_synonym="Ab1-209; LRRG00117"
                     /note="liver regeneration-related protein
                     LRRG041/LRRGT00117"
                     /codon_start=1
                     /product="arrestin domain-containing protein 4"
                     /protein_id="NP_001380690.1"
                     /db_xref="GeneID:293019"
                     /db_xref="RGD:1311763"
                     /translation="MGGEAGADGPRGRVKSLGLVFEDESKGCYSSGETVAGHVLLEAA
                     EPVTLRGLRLEAQGRATSAWGPSAGARVCIGGASPAASSEVEYLNLRLSLLEAPAGEG
                     VTLLQPGKHEFPFRFQLPSEPLATSFTGKYGSIQYCVRAVLERPQVPDQSVRRELQVV
                     SHVDVNTPPLLTPMLKTQEKMVGCWLFTSGPVSLSVKIERKGYCNGEAIPIYAEIENC
                     SSRLVVPKAAIFQTQTYLASGKTKTVRHMVANVRGNHIGSGSTDTWNGKMLKIPPVTP
                     SILDCCIIRVDYSLAVYIHIPGAKKLMLELPLVIGTIPYSGFGRRNSSMASQFSMDMC
                     WLALALPEQPEAPPNYADVVSEEEFSRHIPPYPQPSACDGEACYSMFACIQEFRFQPP
                     PLYSEVDPHPGDAQETQPVSFIL"
     exon            487..553
                     /gene="Arrdc4"
                     /gene_synonym="Ab1-209; LRRG00117"
                     /inference="alignment:Splign:2.1.0"
     exon            554..701
                     /gene="Arrdc4"
                     /gene_synonym="Ab1-209; LRRG00117"
                     /inference="alignment:Splign:2.1.0"
     exon            702..804
                     /gene="Arrdc4"
                     /gene_synonym="Ab1-209; LRRG00117"
                     /inference="alignment:Splign:2.1.0"
     exon            805..1061
                     /gene="Arrdc4"
                     /gene_synonym="Ab1-209; LRRG00117"
                     /inference="alignment:Splign:2.1.0"
     exon            1062..1224
                     /gene="Arrdc4"
                     /gene_synonym="Ab1-209; LRRG00117"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1379
                     /gene="Arrdc4"
                     /gene_synonym="Ab1-209; LRRG00117"
                     /inference="alignment:Splign:2.1.0"
     exon            1380..3944
                     /gene="Arrdc4"
                     /gene_synonym="Ab1-209; LRRG00117"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctttccagt cccagtgggg tgtgttaaag agacagggcc ccggtgtggg tgtttcaccc
       61 ggctgggcgc tttggccgta gtggccctgg gcgtgcggcc ggcgcccgtg acagcagcgt
      121 cgcggagccc gctaccccga cctggggcca ctgcgggtct tggtgacaga gccccatcgc
      181 ctggcgggat gggaggcgaa gcgggagccg atggtccccg gggccgtgtc aagagcctgg
      241 ggttagtgtt cgaagatgag agcaagggct gctactcaag cggcgagaca gtggccgggc
      301 acgtgctgct ggaggcggca gagccggtga ccctgcgcgg gctgcgcctg gaggcccagg
      361 gccgtgccac ctctgcctgg ggcccgagcg ctggggccag ggtctgtatt ggtggcgcct
      421 ctccagcagc ctcctcagag gtggagtact tgaacctgcg cttgagtctg ctcgaggccc
      481 cagctggtga aggcgtcact ttattacaac caggaaaaca cgagtttccc tttcgctttc
      541 aacttccgtc cgaacctttg gcaacatcgt ttactggaaa gtatggcagc attcagtact
      601 gtgtgagggc tgttttggaa cgaccccaag ttccagacca gagtgtaaga agagagctcc
      661 aggttgtcag tcacgtggat gtcaacacac cacccttatt gactcctatg ctgaagacac
      721 aggagaaaat ggttggctgc tggcttttca cttccggtcc cgtgtcactg agcgtcaaga
      781 tcgagagaaa gggctactgt aatggagaag ctatccctat ctatgcagaa atagaaaatt
      841 gttcatctcg cctggttgtt cctaaggcag ccatattcca aacccagaca tatttggcta
      901 gtggaaagac aaagacagtc cggcacatgg ttgccaatgt tcgtggaaac cacattggtt
      961 ctgggagtac ggacacatgg aatgggaaga tgctgaagat cccacctgtc actccgtcca
     1021 tcctggattg ctgcattatc agagtggact actccttagc tgtatacatt cacattcctg
     1081 gtgctaaaaa gttgatgctg gagctgccct tggttattgg tacaattccc tacagtggct
     1141 ttggccgcag aaacagcagt atggcaagcc agttcagtat ggacatgtgc tggttggcac
     1201 tggccctgcc ggagcagcct gaagcaccac caaattatgc agatgtggta tctgaagaag
     1261 aattctcccg acacattcct ccttatcctc agccttctgc ctgtgacggg gaagcctgct
     1321 actctatgtt tgcctgcata caagaattcc ggtttcagcc tccgcctctt tattcagagg
     1381 ttgatccaca tcctggtgat gcccaagaga cccagcctgt gtccttcatt ctctgaacaa
     1441 actccagact tcactgtgtc gttaccaact tagaatattg gtcctttcgc ctcccttgct
     1501 ggatgagaga gaaagttaac ttcagaatgt caatgatctt caaggccgaa gatgatagaa
     1561 gtgaaaggat atgagaactt ttagtgacca gggggatggt tttgcagttt ctagggtggg
     1621 ctcacttgtc ccccttaaaa gtggatgaaa atttgaattg aaaaaccgga agtcctgatg
     1681 gtaggagaag atgtggaaga atgcccggac tgttgaagag ggagtcttaa ggaattggga
     1741 tgttactgga gtgtgctccg accagggttc acacacagtt gtgaacttat ggacttggtt
     1801 ggaagacatg atttagggga acaagacagc tttgaattga gtgtgaatga gcaagaggtc
     1861 tactttcagt gcgattgagg accctaggta ttggggtctt catgatttcg tatcatgtta
     1921 ccacagcaag gatccggggt ccctgaaagt atcctttctg gagtcagtgg tcatgtgaga
     1981 tcctgaagga actgacagtg gctccagtct ttcgtgaaga tgctaaaatg taccttggaa
     2041 attggctcta ctatagtagg aagcctagat gggattcctt aaaagtttgc cgtatcaaac
     2101 ggaaaagagg aattgtttgt gaaagcgtat attgtgaagg gctgaacttc ttacactttt
     2161 aagaactgct tgcagggtgg acgtttgatt ttcctcattc cttatttact taggaactat
     2221 tagaaaaaga aggggtaggc acaacatcgt tgggatactt gatacctata caaacagagt
     2281 gttctcttat cctacctcta gtggctttgt cagacctgct ctcaaaagtc caggcctgac
     2341 caacctctgg ggtttctgct ctgtgcagtt agcagactcc tctgagcctg tcacttgacc
     2401 agaaaactag accaaggaaa aagcccatga actcagagac aaaaatacaa acacctaaga
     2461 tcttaagaaa ccccagatca aaagaggaca gaagcacgcc tgagcttggt tcctgtgaag
     2521 agacctcagt gggcagacgg cagttcttgt gttgtgcttt cgtattccag cttgttagta
     2581 attccattca tactgtgatt tgtttttttt tgtttttgtt tttgtttttt ttttaagcaa
     2641 attgttttgg tgcaatattt tgttgtcttt gagtctcagg atattcagac ctacaggact
     2701 gtgttactgc tggcagggtc agccatgtta ccagcctcct ccctctgttc acagtcacat
     2761 gctcagttgt tttgcctgca gcctgttggt cccacgaacc gagcacactt ctgacaccag
     2821 gtgggaggga gactctcaca gtcgagatct ggacaagcca aatcctaagg gttcgattta
     2881 gaaaccctgg tgcttcccag gcagaatgct gtgccgcttc cattgtggtg atggacttac
     2941 cttttaatca ccatgtcccc tcagacacat tcttctagag tggaatttta tatcaaagtc
     3001 agtgggtcat ttgttcaggg attttgtacc aatgtttggt aaatgtgtac tccctgttga
     3061 gcatacctct tctgtgatca tcttagcgtc cagtacgtgt gtttcactgt atgccatcgt
     3121 caaaaatgcc aagtggtatt gccaataatt gtggtatggg aattaccaca agtccttatt
     3181 tctcattttg gtttttagag atttctttct gttgtgtatc tgtaacagtt acaattgttc
     3241 aaatttcata taaactgctt ttatgtttgc catggaaaag atggtgagct gtcttttggc
     3301 ttccggcctg tagtttactt gctatgtcaa gtcatggtcc atctatgaaa ccaaaatgaa
     3361 gggaaagaaa gcaacagtac caagtggaca gagtagatca gccatggcag tcagtttggt
     3421 tagagaaatc atgaagtccc cccatgaaac agaagcatgg ctaacagtgg cattaaagag
     3481 aagagtccag agacctaact ttatacctgt gtctggcctg aagcttatac ccaggataac
     3541 atgaatgtag aggactgcat cagaaacact gcggatgaag atcagactta gctgctaaca
     3601 cttgcctgtt tagtcccctc ttgctctcac ttagcttggg aaaaacaaaa agtgccctta
     3661 gcattttctt tctgatgcac aaagcttgag attccaagtg tgcatctttt ggtgcacgca
     3721 gatccttccc tccccacccc ggggcagaac tttacttcct gtgtctttgt tttgcacaat
     3781 aagaaactca gtaggcaaag gttgtgtttt tggtaagttc acttgctttt taaaaatttt
     3841 tattaaaaat gtaataattt aaccaagggg aaaataaaga ttgtattttg tactcttctt
     3901 tgaaccccat gggttccttt ttgttaataa aatggttata ctaa
//
