LOCUS       NM_001100770            1597 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus arrestin domain containing 1 (Arrdc1), mRNA.
ACCESSION   NM_001100770 XM_001071550 XM_345323
VERSION     NM_001100770.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Mackenzie,K., Foot,N.J., Anand,S., Dalton,H.E., Chaudhary,N.,
            Collins,B.M., Mathivanan,S. and Kumar,S.
  TITLE     Regulation of the divalent metal ion transporter via membrane
            budding
  JOURNAL   Cell Discov 2, 16011 (2016)
   PUBMED   27462458
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Puca,L., Chastagner,P., Meas-Yedid,V., Israel,A. and Brou,C.
  TITLE     Alpha-arrestin 1 (ARRDC1) and beta-arrestins cooperate to mediate
            Notch degradation in mammals
  JOURNAL   J Cell Sci 126 (Pt 19), 4457-4468 (2013)
   PUBMED   23886940
REFERENCE   3  (bases 1 to 1597)
  AUTHORS   Nabhan,J.F., Hu,R., Oh,R.S., Cohen,S.N. and Lu,Q.
  TITLE     Formation and release of arrestin domain-containing protein
            1-mediated microvesicles (ARMMs) at plasma membrane by recruitment
            of TSG101 protein
  JOURNAL   Proc Natl Acad Sci U S A 109 (11), 4146-4151 (2012)
   PUBMED   22315426
REFERENCE   4  (bases 1 to 1597)
  AUTHORS   Shea,F.F., Rowell,J.L., Li,Y., Chang,T.H. and Alvarez,C.E.
  TITLE     Mammalian alpha arrestins link activated seven transmembrane
            receptors to Nedd4 family e3 ubiquitin ligases and interact with
            beta arrestins
  JOURNAL   PLoS One 7 (12), e50557 (2012)
   PUBMED   23236378
REFERENCE   5  (bases 1 to 1597)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC158871.1.
            
            On or before Sep 14, 2008 this sequence version replaced
            XM_345323.3, XM_001071550.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158871.1, BC079372.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..1597
                     /gene="Arrdc1"
                     /note="arrestin domain containing 1"
                     /db_xref="GeneID:366001"
                     /db_xref="RGD:1309961"
     exon            1..132
                     /gene="Arrdc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             15..1319
                     /gene="Arrdc1"
                     /note="alpha-arrestin 1"
                     /codon_start=1
                     /product="arrestin domain-containing protein 1"
                     /protein_id="NP_001094240.1"
                     /db_xref="GeneID:366001"
                     /db_xref="RGD:1309961"
                     /translation="MGRVQLFEIRLSQGRVVYSPGEPLAGAVHLRLGAPLPFRAIRVT
                     CMGSCGVSNKANDGAWVVEESYFNSSLSLADKGSLPPGEHNFPFQFLLPATAPTSFEG
                     PFGKIVHQVRASIDTPRFSKDHKCSLVFYILSPLNLNSIPDIEQPNVASTTKKFSYKL
                     VKTGSVVLTASTDLRGYVVGQVLRLQADIENQSGKDTSPVVASLLQKVSYKAKRWIYD
                     VRTIAEVEGTGVKAWRHAQWQEQILVPALPQSALPGCSLIHIDYYLQVSMKAPEATVT
                     LPLFVGNIAVNQTPLSPCPGPGSSPGLLSPVVPSAPPQEEAEAVASGPHFSDPVSLST
                     KSHSQQQPLSTTLGSVSVTTIEPCVQVGSPARHSLHPPLCISIGATVPYFAEGSGGPV
                     PTTSALILPPEYSSWGYPYEAPPSYEQSCGAGGTDVGLIPGS"
     exon            133..243
                     /gene="Arrdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            244..294
                     /gene="Arrdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            295..449
                     /gene="Arrdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            450..632
                     /gene="Arrdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            633..809
                     /gene="Arrdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            810..1248
                     /gene="Arrdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1249..1579
                     /gene="Arrdc1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgggagaccg cggtatgggg agggtgcagc tcttcgagat ccgcctgagt cagggccgcg
       61 tcgtctacag tcctggggag ccgctggctg gggccgtgca cttgcgcctg ggagcgccac
      121 tacccttccg agctatccgg gtgacctgca tgggttcctg tggggtctcc aacaaggcca
      181 acgatggggc atgggtggtg gaggagagct acttcaacag ctccctatca ctggctgaca
      241 agggaagtct gccacctgga gagcacaact tcccttttca gttcctgctt cctgccacag
      301 cacccacatc tttcgagggc ccctttggga agattgtgca ccaggtgagg gcgtccatcg
      361 acactccacg tttttccaag gatcacaaat gcagcctcgt gttctacatc ctgagcccct
      421 tgaacctgaa cagcatccca gatatcgagc aacccaatgt ggcctctact accaagaagt
      481 tctcctataa gctggtgaag accggcagtg tggttctcac agctagcacg gaccttcgtg
      541 gctatgtggt aggacaggtg ctgcggctgc aggctgacat tgagaaccag tcgggcaagg
      601 acaccagccc tgtggtggcc agcttgctac agaaggtgtc ctataaggcc aagcgctgga
      661 tctatgatgt gcggaccatt gcagaggtgg agggcacagg tgtcaaggcc tggaggcatg
      721 ctcagtggca agaacagatc ctggtgcctg ccctgcccca gtcagccctg cctggctgca
      781 gccttatcca catcgactat taccttcagg tctccatgaa agcacccgag gccaccgtga
      841 ctctcccact atttgttggc aatattgctg tgaaccaaac tccactgagc ccctgtccag
      901 gcccagggtc ttctcctggg ctgctgtccc cagtggtgcc ctctgcacct cctcaggaag
      961 aggctgaggc agtggctagt ggccctcact tctcagaccc tgtctcactc tccaccaaga
     1021 gccattctca gcagcagcca ctgtctacta cattgggttc tgtgtctgtc accaccattg
     1081 agccgtgtgt tcaggttgga agtcctgcta gacattctct gcaccctccc ttgtgcatct
     1141 ctataggtgc cactgtcccc tactttgcag aaggctctgg gggcccagta cctaccacca
     1201 gcgccttgat ccttcctcca gagtacagtt catggggcta cccctatgag gctccaccat
     1261 cctatgagca gagctgtggt gctggtggta cagatgttgg cctgatccca gggagctgac
     1321 cctggtatgc taacccatgc caccttgttt ggtggttctg gcctttgccc tggcatggga
     1381 tgcccagggc ctcgtgcctt tgctctctac ctggcccagc tactcaggac ctgcagctgt
     1441 cgggggaaga cccccctgtg gaccagccac tcttggctcc tctggaatga attattcagt
     1501 cctcttcttg agaggttggg gtagggcggc agagatctgg ggcctggaga gactgtataa
     1561 ataaagcgct ttatttgtaa aaaaaaaaaa aaaaaaa
//
